RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 MAP3K12Q12852 859 aa19.12■□□□□ 0.65
C9orf78-201ENST00000372447 RBM26Q5T8P6 1007 aaKnown RBP19.12■□□□□ 0.65
C9orf78-201ENST00000372447 KBTBD3Q8NAB2 608 aa19.12■□□□□ 0.65
C9orf78-201ENST00000372447 TMX3Q96JJ7 454 aa19.12■□□□□ 0.65
C9orf78-201ENST00000372447 SERPINA10Q9UK55 444 aa19.12■□□□□ 0.65
C9orf78-201ENST00000372447 MAST3O60307 1309 aa19.12■□□□□ 0.65
C9orf78-201ENST00000372447 VEGFAP15692 232 aaPredicted RBP19.11■□□□□ 0.65
C9orf78-201ENST00000372447 EPHX2P34913 555 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 CRKP46108 304 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 HDLBPQ00341 1268 aaKnown RBP19.11■□□□□ 0.65
C9orf78-201ENST00000372447 TBC1D10BQ4KMP7 808 aaPredicted RBP19.11■□□□□ 0.65
C9orf78-201ENST00000372447 UPF3BQ9BZI7 483 aaKnown RBP19.11■□□□□ 0.65
C9orf78-201ENST00000372447 TAF1DQ9H5J8 278 aaPredicted RBP19.11■□□□□ 0.65
C9orf78-201ENST00000372447 ADARB2Q9NS39 739 aaKnown RBP19.11■□□□□ 0.65
C9orf78-201ENST00000372447 MYO5AQ9Y4I1 1855 aaKnown RBP19.11■□□□□ 0.65
C9orf78-201ENST00000372447 DDX11L8A8MPP1 907 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 CHGBP05060 677 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 RBM5P52756 815 aaKnown RBP eCLIP19.11■□□□□ 0.65
C9orf78-201ENST00000372447 CFAP100Q494V2 611 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 SLC9C2Q5TAH2 1124 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 HHIPL2Q6UWX4 724 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 RASEFQ8IZ41 740 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 MAGEB6Q8N7X4 407 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 TRPM4Q8TD43 1214 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 TEKT1Q969V4 418 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 GBP4Q96PP9 640 aa19.11■□□□□ 0.65
C9orf78-201ENST00000372447 CCDC171Q6TFL3 1326 aa19.1■□□□□ 0.65
C9orf78-201ENST00000372447 IGSF3O75054 1194 aa19.1■□□□□ 0.65
C9orf78-201ENST00000372447 HIRAP54198 1017 aaPredicted RBP19.1■□□□□ 0.65
C9orf78-201ENST00000372447 NAA16Q6N069 864 aaPredicted RBP19.1■□□□□ 0.65
C9orf78-201ENST00000372447 GPBP1L1Q9HC44 474 aaPredicted RBP19.1■□□□□ 0.65
C9orf78-201ENST00000372447 RFX7Q2KHR2 1363 aa19.1■□□□□ 0.65
C9orf78-201ENST00000372447 A0A0D9SFI3 127 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 PDE6AP16499 860 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 NUCB2P80303 420 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 DLGAP5Q15398 846 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 KIF4BQ2VIQ3 1234 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 SLFNL1Q499Z3 407 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 ADGRA1Q86SQ6 560 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 MTMR14Q8NCE2 650 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 KCNB2Q92953 911 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 FAM163AQ96GL9 167 aaPredicted RBP19.09■□□□□ 0.65
C9orf78-201ENST00000372447 ZBED3Q96IU2 234 aaPredicted RBP19.09■□□□□ 0.65
C9orf78-201ENST00000372447 PRMT6Q96LA8 375 aaPredicted RBP19.09■□□□□ 0.65
C9orf78-201ENST00000372447 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.09■□□□□ 0.65
C9orf78-201ENST00000372447 DAGLAQ9Y4D2 1042 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 WNT10BO00744 389 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 GSTO1P78417 241 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 CUL4AQ13619 759 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 NBPF9Q3BBW0 867 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 APOBEC3HQ6NTF7 200 aaKnown RBP19.09■□□□□ 0.65
C9orf78-201ENST00000372447 ZDHHC15Q96MV8 337 aa19.09■□□□□ 0.65
C9orf78-201ENST00000372447 SCN4AP35499 1836 aa19.08■□□□□ 0.65
C9orf78-201ENST00000372447 DOCK2Q92608 1830 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 TCRBV5S4A2TA0A5A2 114 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 SPDYE2BA6NHP3 402 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 SPDYE6P0CI01 402 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 CYP7A1P22680 504 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 ADD2P35612 726 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 NECTIN1Q15223 517 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 SLF2Q8IX21 1173 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 ZNF784Q8NCA9 323 aaPredicted RBP19.08■□□□□ 0.64
C9orf78-201ENST00000372447 MAP4K1Q92918 833 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 MROH7-TTC4A0A0A0MT08 1334 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 GAKO14976 1311 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 ZNF532Q9HCE3 1301 aa19.08■□□□□ 0.64
C9orf78-201ENST00000372447 LDHCP07864 332 aa19.07■□□□□ 0.64
C9orf78-201ENST00000372447 USP50Q70EL3 339 aaPredicted RBP19.07■□□□□ 0.64
C9orf78-201ENST00000372447 UBE3CQ15386 1083 aa19.06■□□□□ 0.64
C9orf78-201ENST00000372447 ZSCAN25Q6NSZ9 544 aa19.06■□□□□ 0.64
C9orf78-201ENST00000372447 CLEC17AQ6ZS10 378 aa19.06■□□□□ 0.64
C9orf78-201ENST00000372447 PNMA8AQ86V59 439 aaPredicted RBP19.06■□□□□ 0.64
C9orf78-201ENST00000372447 TTC14Q96N46 770 aa19.06■□□□□ 0.64
C9orf78-201ENST00000372447 RBM8AQ9Y5S9 174 aaKnown RBP19.06■□□□□ 0.64
C9orf78-201ENST00000372447 GPR75-ASB3A0A0A6YYF3 556 aa19.06■□□□□ 0.64
C9orf78-201ENST00000372447 RNF113AO15541 343 aaKnown RBP19.06■□□□□ 0.64
C9orf78-201ENST00000372447 POTEIP0CG38 1075 aa19.06■□□□□ 0.64
C9orf78-201ENST00000372447 POTEJP0CG39 1038 aa19.06■□□□□ 0.64
C9orf78-201ENST00000372447 EAPPQ56P03 285 aaPredicted RBP19.06■□□□□ 0.64
C9orf78-201ENST00000372447 TMED8Q6PL24 325 aaPredicted RBP19.06■□□□□ 0.64
C9orf78-201ENST00000372447 NOL8Q76FK4 1167 aaKnown RBP19.06■□□□□ 0.64
C9orf78-201ENST00000372447 INTS4Q96HW7 963 aaKnown RBP19.06■□□□□ 0.64
C9orf78-201ENST00000372447 ASTN2O75129 1339 aaPredicted RBP19.06■□□□□ 0.64
C9orf78-201ENST00000372447 ADAMTSL1Q8N6G6 1762 aa19.05■□□□□ 0.64
C9orf78-201ENST00000372447 ZKSCAN1P17029 563 aaPredicted RBP19.05■□□□□ 0.64
C9orf78-201ENST00000372447 BTDP43251 543 aa19.05■□□□□ 0.64
C9orf78-201ENST00000372447 TM6SF1Q9BZW5 370 aa19.05■□□□□ 0.64
C9orf78-201ENST00000372447 TDRD3Q9H7E2 651 aaKnown RBP19.05■□□□□ 0.64
C9orf78-201ENST00000372447 MYH2Q9UKX2 1941 aa19.04■□□□□ 0.64
C9orf78-201ENST00000372447 ZFYP08048 801 aaPredicted RBP19.04■□□□□ 0.64
C9orf78-201ENST00000372447 CASTP20810 708 aaKnown RBP19.04■□□□□ 0.64
C9orf78-201ENST00000372447 CREB3L3Q68CJ9 461 aa19.04■□□□□ 0.64
C9orf78-201ENST00000372447 ZNF589Q86UQ0 364 aaPredicted RBP19.04■□□□□ 0.64
C9orf78-201ENST00000372447 MIGA1Q8NAN2 632 aa19.04■□□□□ 0.64
C9orf78-201ENST00000372447 AATFQ9NY61 560 aaKnown RBP eCLIP19.04■□□□□ 0.64
C9orf78-201ENST00000372447 TRAK2O60296 914 aa19.04■□□□□ 0.64
C9orf78-201ENST00000372447 LRRFIP1Q32MZ4 808 aaKnown RBP19.04■□□□□ 0.64
C9orf78-201ENST00000372447 CDC42EP5Q6NZY7 148 aa19.04■□□□□ 0.64
C9orf78-201ENST00000372447 TICAM2Q86XR7 235 aa19.04■□□□□ 0.64
C9orf78-201ENST00000372447 PUS7LQ9H0K6 701 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms