RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 KLRK1P26718 216 aa15.33■□□□□ 0.04
LDB3-203ENST00000372056 GJB2P29033 226 aa15.33■□□□□ 0.04
LDB3-203ENST00000372056 EXOSC10Q01780 885 aaKnown RBP15.33■□□□□ 0.04
LDB3-203ENST00000372056 KIAA2012Q0VF49 1180 aa15.33■□□□□ 0.04
LDB3-203ENST00000372056 Q6ZUG5 572 aa15.33■□□□□ 0.04
LDB3-203ENST00000372056 DZIP1Q86YF9 867 aaKnown RBP15.33■□□□□ 0.04
LDB3-203ENST00000372056 MRIQ9BWK5 157 aa15.33■□□□□ 0.04
LDB3-203ENST00000372056 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.04
LDB3-203ENST00000372056 LMBRD1Q9NUN5 540 aa15.33■□□□□ 0.04
LDB3-203ENST00000372056 CHAF1AQ13111 956 aaPredicted RBP15.32■□□□□ 0.04
LDB3-203ENST00000372056 IMMTQ16891 758 aaKnown RBP15.32■□□□□ 0.04
LDB3-203ENST00000372056 NSUN4Q96CB9 384 aaKnown RBP15.32■□□□□ 0.04
LDB3-203ENST00000372056 FAM163AQ96GL9 167 aaPredicted RBP15.32■□□□□ 0.04
LDB3-203ENST00000372056 IQSEC3Q9UPP2 1182 aaPredicted RBP15.32■□□□□ 0.04
LDB3-203ENST00000372056 LAMA4Q16363 1823 aa15.32■□□□□ 0.04
LDB3-203ENST00000372056 MAGEB6P1A0A0J9YX57 407 aa15.31■□□□□ 0.04
LDB3-203ENST00000372056 STX6O43752 255 aa15.31■□□□□ 0.04
LDB3-203ENST00000372056 KLHL40Q2TBA0 621 aa15.31■□□□□ 0.04
LDB3-203ENST00000372056 CHAMP1Q96JM3 812 aa15.31■□□□□ 0.04
LDB3-203ENST00000372056 STRBPQ96SI9 672 aaKnown RBP15.31■□□□□ 0.04
LDB3-203ENST00000372056 AGXT2Q9BYV1 514 aa15.31■□□□□ 0.04
LDB3-203ENST00000372056 MAST2Q6P0Q8 1798 aa15.31■□□□□ 0.04
LDB3-203ENST00000372056 WTIPA6NIX2 430 aaPredicted RBP15.31■□□□□ 0.04
LDB3-203ENST00000372056 ZSCAN22P10073 491 aaPredicted RBP15.31■□□□□ 0.04
LDB3-203ENST00000372056 PTGER2P43116 358 aa15.31■□□□□ 0.04
LDB3-203ENST00000372056 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
LDB3-203ENST00000372056 KIAA1551Q9HCM1 1747 aa15.3■□□□□ 0.04
LDB3-203ENST00000372056 C21orf2O43822 256 aa15.3■□□□□ 0.04
LDB3-203ENST00000372056 HDLBPQ00341 1268 aaKnown RBP15.3■□□□□ 0.04
LDB3-203ENST00000372056 BRF1Q92994 677 aa15.3■□□□□ 0.04
LDB3-203ENST00000372056 GTF3C6Q969F1 213 aa15.3■□□□□ 0.04
LDB3-203ENST00000372056 CHMP4CQ96CF2 233 aa15.3■□□□□ 0.04
LDB3-203ENST00000372056 MYO3BQ8WXR4 1341 aa15.3■□□□□ 0.04
LDB3-203ENST00000372056 CACNA1SQ13698 1873 aa15.3■□□□□ 0.04
LDB3-203ENST00000372056 SNED1Q8TER0 1413 aa15.3■□□□□ 0.04
LDB3-203ENST00000372056 COL1A1P02452 1464 aaPredicted RBP15.29■□□□□ 0.04
LDB3-203ENST00000372056 PCP11498 1178 aaKnown RBP15.29■□□□□ 0.04
LDB3-203ENST00000372056 PPP4CP60510 307 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 HAND2P61296 217 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 MECOMQ03112 1051 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 MFSD14BQ5SR56 506 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 FBXL16Q8N461 479 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 LRRC2Q9BYS8 371 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 CRNKL1Q9BZJ0 848 aaKnown RBP15.29■□□□□ 0.04
LDB3-203ENST00000372056 ATP8A2Q9NTI2 1148 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 DDX49Q9Y6V7 483 aaKnown RBP15.29■□□□□ 0.04
LDB3-203ENST00000372056 ZNF213O14771 459 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 RIMBP2O15034 1052 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 PRPF40AO75400 957 aaKnown RBP15.29■□□□□ 0.04
LDB3-203ENST00000372056 FGD1P98174 961 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 STK3Q13188 491 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 LTBP3Q9NS15 1303 aa15.29■□□□□ 0.04
LDB3-203ENST00000372056 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
LDB3-203ENST00000372056 DTNBO60941 627 aa15.28■□□□□ 0.04
LDB3-203ENST00000372056 APPP05067 770 aa15.28■□□□□ 0.04
LDB3-203ENST00000372056 PDIA4P13667 645 aaKnown RBP15.28■□□□□ 0.04
LDB3-203ENST00000372056 MTMR6Q9Y217 621 aa15.28■□□□□ 0.04
LDB3-203ENST00000372056 USP17L3A6NCW0 530 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 USP17L4A6NCW7 530 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 PPIP5K2O43314 1243 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 PFKFB2O60825 505 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 MBD4O95243 580 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 F13A1P00488 732 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 GTF2IP78347 998 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 USP17L1Q7RTZ2 530 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 MB21D2Q8IYB1 491 aaPredicted RBP15.27■□□□□ 0.04
LDB3-203ENST00000372056 NBPF3Q9H094 633 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 NAPBQ9H115 298 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 TAOK2Q9UL54 1235 aa15.27■□□□□ 0.04
LDB3-203ENST00000372056 FSD2A1L4K1 749 aa15.27■□□□□ 0.03
LDB3-203ENST00000372056 PDCP20941 246 aa15.27■□□□□ 0.03
LDB3-203ENST00000372056 TRDNQ13061 729 aa15.27■□□□□ 0.03
LDB3-203ENST00000372056 AMOTL1Q8IY63 956 aa15.27■□□□□ 0.03
LDB3-203ENST00000372056 RNF41Q9H4P4 317 aaPredicted RBP15.27■□□□□ 0.03
LDB3-203ENST00000372056 CNNM2Q9H8M5 875 aa15.27■□□□□ 0.03
LDB3-203ENST00000372056 ECE2O60344 883 aa15.26■□□□□ 0.03
LDB3-203ENST00000372056 PRDX5P30044 214 aa15.26■□□□□ 0.03
LDB3-203ENST00000372056 APOBRQ0VD83 1088 aa15.26■□□□□ 0.03
LDB3-203ENST00000372056 LARP1BQ659C4 914 aaKnown RBP15.26■□□□□ 0.03
LDB3-203ENST00000372056 HHIPL2Q6UWX4 724 aa15.26■□□□□ 0.03
LDB3-203ENST00000372056 IFNL3Q8IZI9 196 aa15.26■□□□□ 0.03
LDB3-203ENST00000372056 RIOK1Q9BRS2 568 aaKnown RBP15.26■□□□□ 0.03
LDB3-203ENST00000372056 PPP1R1BQ9UD71 204 aaPredicted RBP15.26■□□□□ 0.03
LDB3-203ENST00000372056 SLC4A4Q9Y6R1 1079 aa15.26■□□□□ 0.03
LDB3-203ENST00000372056 MROH7-TTC4A0A0A0MT08 1334 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 WDR19Q8NEZ3 1342 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 SLC3A2P08195 630 aaKnown RBP15.25■□□□□ 0.03
LDB3-203ENST00000372056 MCM5P33992 734 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 EVCP57679 992 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 SCRN1Q12765 414 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 CHST3Q7LGC8 479 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 NCOA7Q8NI08 942 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 MTA3Q9BTC8 594 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 TAOK3Q9H2K8 898 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 ARMT1Q9H993 441 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 EPB41L4AQ9HCS5 686 aaPredicted RBP15.25■□□□□ 0.03
LDB3-203ENST00000372056 ATP6V1DQ9Y5K8 247 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 BRCA1P38398 1863 aaKnown RBP15.25■□□□□ 0.03
LDB3-203ENST00000372056 GPR75-ASB3A0A0A6YYF3 556 aa15.25■□□□□ 0.03
LDB3-203ENST00000372056 FOXD4L6Q3SYB3 417 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms