RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 MED23Q9ULK4 1368 aa13.44□□□□□ -0.26
TSPAN1-201ENST00000372003 HIP1O00291 1037 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 FIBPO43427 364 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 GJB2P29033 226 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 HIBADHP31937 336 aaKnown RBP13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 KRT85P78386 507 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 PPP4R3BQ5MIZ7 849 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 GORABQ5T7V8 394 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 ZNF804AQ7Z570 1209 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 AACSQ86V21 672 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 EAF2Q96CJ1 260 aaPredicted RBP13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 XAGE2Q96GT9 111 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 IL25Q9H293 177 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 KCNF1Q9H3M0 494 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 KCNQ5Q9NR82 932 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 PDRG1Q9NUG6 133 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 ZNRF3Q9ULT6 936 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 IQSEC3Q9UPP2 1182 aaPredicted RBP13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 CYP46A1Q9Y6A2 500 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 IRS2Q9Y4H2 1338 aa13.43□□□□□ -0.26
TSPAN1-201ENST00000372003 RAD17O75943 681 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 MAP3K11Q16584 847 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 GIMAP6Q6P9H5 292 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 RBM43Q6ZSC3 357 aaKnown RBP13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 C15orf52Q6ZUT6 534 aaKnown RBP13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 FBXW7Q969H0 707 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 COA1Q9GZY4 146 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 CD209Q9NNX6 404 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 GPR108Q9NPR9 543 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 SNRKQ9NRH2 765 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 DDX19AQ9NUU7 478 aaKnown RBP13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 PAXBP1Q9Y5B6 917 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 YDJCA8MPS7 323 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 PSMA5P28066 241 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 EIF6P56537 245 aaKnown RBP13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 ANKRD1Q15327 319 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 DBNDD2Q9BQY9 259 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 SCAND2PQ9GZW5 306 aaPredicted RBP13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 NUP62CLQ9H1M0 184 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 TLR7Q9NYK1 1049 aaKnown RBP13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 JAG2Q9Y219 1238 aa13.42□□□□□ -0.26
TSPAN1-201ENST00000372003 FER1L6Q2WGJ9 1857 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 FZD9O00144 591 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 IFIT2P09913 472 aaKnown RBP13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 CASTP20810 708 aaKnown RBP13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 CDC25BP30305 580 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 PHKA1P46020 1223 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 DNM1Q05193 864 aaKnown RBP13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 TAF3Q5VWG9 929 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 CCDC102BQ68D86 513 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 PODNQ7Z5L7 613 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 FBXO33Q7Z6M2 555 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 GJA3Q9Y6H8 435 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 COL4A5P29400 1685 aa13.41□□□□□ -0.26
TSPAN1-201ENST00000372003 ZKSCAN1P17029 563 aaPredicted RBP13.4□□□□□ -0.26
TSPAN1-201ENST00000372003 CXCL9Q07325 125 aa13.4□□□□□ -0.26
TSPAN1-201ENST00000372003 FOXD4L6Q3SYB3 417 aaPredicted RBP13.4□□□□□ -0.26
TSPAN1-201ENST00000372003 FOXD4L3Q6VB84 417 aaPredicted RBP13.4□□□□□ -0.26
TSPAN1-201ENST00000372003 DBNLQ9UJU6 430 aaKnown RBP13.4□□□□□ -0.26
TSPAN1-201ENST00000372003 PYCARDQ9ULZ3 195 aa13.4□□□□□ -0.26
TSPAN1-201ENST00000372003 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
TSPAN1-201ENST00000372003 ZNF609O15014 1411 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 AP5Z1O43299 807 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 NEMFO60524 1076 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 GTF2IP78347 998 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 TYRO3Q06418 890 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 NECTIN1Q15223 517 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 CCDC158Q5M9N0 1113 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 DPY19L2Q6NUT2 758 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 TDRD7Q8NHU6 1098 aaKnown RBP13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 EVI5LQ96CN4 794 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 GNL3LQ9NVN8 582 aaKnown RBP13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 OGFRQ9NZT2 677 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 MRVI1Q9Y6F6 885 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 DDNO94850 711 aaPredicted RBP13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 IL1R1P14778 569 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 TTLL5Q6EMB2 1281 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 CIAPIN1Q6FI81 312 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 CGNQ9P2M7 1197 aaKnown RBP13.39□□□□□ -0.27
TSPAN1-201ENST00000372003 USP17L3A6NCW0 530 aa13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 USP17L4A6NCW7 530 aa13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 PSMD14O00487 310 aa13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 GABPB1Q06547 395 aaPredicted RBP13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 LARP1BQ659C4 914 aaKnown RBP13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 CWC27Q6UX04 472 aaKnown RBP13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 USP17L1Q7RTZ2 530 aa13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 C17orf53Q8N3J3 647 aaPredicted RBP13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 JAKMIP1Q96N16 626 aaKnown RBP13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 MXD3Q9BW11 206 aa13.38□□□□□ -0.27
TSPAN1-201ENST00000372003 ECHDC1Q9NTX5 307 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms