RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 CYB5R4Q7L1T6 521 aa20.71■□□□□ 0.91
SSBP3-203ENST00000371319 DZIP1Q86YF9 867 aaKnown RBP20.71■□□□□ 0.91
SSBP3-203ENST00000371319 MPNDQ8N594 471 aa20.71■□□□□ 0.91
SSBP3-203ENST00000371319 BAZ2AQ9UIF9 1905 aaKnown RBP20.71■□□□□ 0.91
SSBP3-203ENST00000371319 H0YIN7 160 aa20.7■□□□□ 0.9
SSBP3-203ENST00000371319 SCRN1Q12765 414 aa20.7■□□□□ 0.9
SSBP3-203ENST00000371319 FOXD4L5Q5VV16 416 aaPredicted RBP20.7■□□□□ 0.9
SSBP3-203ENST00000371319 FOXD4L4Q8WXT5 416 aaPredicted RBP20.7■□□□□ 0.9
SSBP3-203ENST00000371319 WDR33Q9C0J8 1336 aaKnown RBP20.7■□□□□ 0.9
SSBP3-203ENST00000371319 LAMB1P07942 1786 aa20.7■□□□□ 0.9
SSBP3-203ENST00000371319 SYT1P21579 422 aa20.69■□□□□ 0.9
SSBP3-203ENST00000371319 TRDNQ13061 729 aa20.69■□□□□ 0.9
SSBP3-203ENST00000371319 AKNAD1Q5T1N1 836 aa20.69■□□□□ 0.9
SSBP3-203ENST00000371319 STAG1Q8WVM7 1258 aa20.69■□□□□ 0.9
SSBP3-203ENST00000371319 ZNF274Q96GC6 653 aaPredicted RBP20.69■□□□□ 0.9
SSBP3-203ENST00000371319 INCENPQ9NQS7 918 aa20.69■□□□□ 0.9
SSBP3-203ENST00000371319 AATFQ9NY61 560 aaKnown RBP eCLIP20.69■□□□□ 0.9
SSBP3-203ENST00000371319 DLEC1Q9Y238 1755 aa20.69■□□□□ 0.9
SSBP3-203ENST00000371319 MYH2Q9UKX2 1941 aa20.69■□□□□ 0.9
SSBP3-203ENST00000371319 PDIA3P30101 505 aaKnown RBP20.68■□□□□ 0.9
SSBP3-203ENST00000371319 GIMAP6Q6P9H5 292 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 ANAPC4Q9UJX5 808 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 FAM205AQ6ZU69 1335 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 C10orf71Q711Q0 1435 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 B4E1Z4 1266 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 RIMBP2O15034 1052 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 STX6O43752 255 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 CHRNA5P30532 468 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 PPARAQ07869 468 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 DPP8Q6V1X1 898 aaPredicted RBP20.68■□□□□ 0.9
SSBP3-203ENST00000371319 COA1Q9GZY4 146 aa20.68■□□□□ 0.9
SSBP3-203ENST00000371319 GSTO1P78417 241 aa20.67■□□□□ 0.9
SSBP3-203ENST00000371319 CNNM2Q9H8M5 875 aa20.67■□□□□ 0.9
SSBP3-203ENST00000371319 BRPF3Q9ULD4 1205 aa20.67■□□□□ 0.9
SSBP3-203ENST00000371319 SH2B2O14492 632 aaPredicted RBP20.66■□□□□ 0.9
SSBP3-203ENST00000371319 JAK2O60674 1132 aa20.66■□□□□ 0.9
SSBP3-203ENST00000371319 ZSCAN22P10073 491 aaPredicted RBP20.66■□□□□ 0.9
SSBP3-203ENST00000371319 MFSD6Q6ZSS7 791 aa20.66■□□□□ 0.9
SSBP3-203ENST00000371319 SMARCC2Q8TAQ2 1214 aa20.66■□□□□ 0.9
SSBP3-203ENST00000371319 LLPHQ9BRT6 129 aaKnown RBP20.66■□□□□ 0.9
SSBP3-203ENST00000371319 CRNKL1Q9BZJ0 848 aaKnown RBP20.66■□□□□ 0.9
SSBP3-203ENST00000371319 KRT23Q9C075 422 aa20.66■□□□□ 0.9
SSBP3-203ENST00000371319 CTDNEP1O95476 244 aa20.65■□□□□ 0.9
SSBP3-203ENST00000371319 PTMSP20962 102 aa20.65■□□□□ 0.9
SSBP3-203ENST00000371319 CNKSR1Q969H4 720 aa20.65■□□□□ 0.9
SSBP3-203ENST00000371319 CHAMP1Q96JM3 812 aa20.65■□□□□ 0.9
SSBP3-203ENST00000371319 MTMR6Q9Y217 621 aa20.65■□□□□ 0.9
SSBP3-203ENST00000371319 MROH7-TTC4A0A0A0MT08 1334 aa20.64■□□□□ 0.9
SSBP3-203ENST00000371319 TRAK2O60296 914 aa20.64■□□□□ 0.9
SSBP3-203ENST00000371319 DIXDC1Q155Q3 683 aa20.64■□□□□ 0.9
SSBP3-203ENST00000371319 MCTP1Q6DN14 999 aa20.64■□□□□ 0.9
SSBP3-203ENST00000371319 CTR9Q6PD62 1173 aa20.64■□□□□ 0.9
SSBP3-203ENST00000371319 NSUN7Q8NE18 718 aaKnown RBP20.64■□□□□ 0.9
SSBP3-203ENST00000371319 IGDCC4Q8TDY8 1250 aa20.64■□□□□ 0.9
SSBP3-203ENST00000371319 TBC1D22AQ8WUA7 517 aa20.64■□□□□ 0.9
SSBP3-203ENST00000371319 CDK5RAP2Q96SN8 1893 aa20.64■□□□□ 0.9
SSBP3-203ENST00000371319 ZC3H12CQ9C0D7 883 aaKnown RBP20.64■□□□□ 0.9
SSBP3-203ENST00000371319 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.9
SSBP3-203ENST00000371319 DCP1AQ9NPI6 582 aaPredicted RBP20.64■□□□□ 0.9
SSBP3-203ENST00000371319 SNED1Q8TER0 1413 aa20.64■□□□□ 0.89
SSBP3-203ENST00000371319 KLF18A0A0U1RQI7 1052 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 MINDY4BA8MYZ0 360 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 SMIM22K7EJ46 135 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 KDM4AO75164 1064 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 LDHCP07864 332 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 PPP4CP60510 307 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 CCT2P78371 535 aaKnown RBP20.63■□□□□ 0.89
SSBP3-203ENST00000371319 MFSD14BQ5SR56 506 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 SLC16A10Q8TF71 515 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 TMEM87BQ96K49 555 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 RNF41Q9H4P4 317 aaPredicted RBP20.63■□□□□ 0.89
SSBP3-203ENST00000371319 ATP8A2Q9NTI2 1148 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 ZSWIM5Q9P217 1185 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 ANGEL1Q9UNK9 670 aaKnown RBP20.63■□□□□ 0.89
SSBP3-203ENST00000371319 HPS5Q9UPZ3 1129 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 NAV1Q8NEY1 1877 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 CYP2D7A0A087X1C5 515 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 GOLGA6L22H0YM25 854 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 F13A1P00488 732 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 LARP1BQ659C4 914 aaKnown RBP20.63■□□□□ 0.89
SSBP3-203ENST00000371319 CCDC125Q86Z20 511 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 C7orf43Q8WVR3 580 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 EYA3Q99504 573 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
SSBP3-203ENST00000371319 NCOA5Q9HCD5 579 aaKnown RBP20.63■□□□□ 0.89
SSBP3-203ENST00000371319 KIF13BQ9NQT8 1826 aa20.63■□□□□ 0.89
SSBP3-203ENST00000371319 ZNF646O15015 1829 aaPredicted RBP20.62■□□□□ 0.89
SSBP3-203ENST00000371319 GTF2IP78347 998 aa20.62■□□□□ 0.89
SSBP3-203ENST00000371319 SH3RF3Q8TEJ3 882 aaPredicted RBP20.62■□□□□ 0.89
SSBP3-203ENST00000371319 LY9Q9HBG7 655 aa20.62■□□□□ 0.89
SSBP3-203ENST00000371319 SENP2Q9HC62 589 aa20.62■□□□□ 0.89
SSBP3-203ENST00000371319 NAP1L2Q9ULW6 460 aaPredicted RBP20.62■□□□□ 0.89
SSBP3-203ENST00000371319 USP17L12C9JPN9 530 aa20.61■□□□□ 0.89
SSBP3-203ENST00000371319 USP17L21D6R901 530 aa20.61■□□□□ 0.89
SSBP3-203ENST00000371319 FGRP09769 529 aa20.61■□□□□ 0.89
SSBP3-203ENST00000371319 PDCP20941 246 aa20.61■□□□□ 0.89
SSBP3-203ENST00000371319 DOK7Q18PE1 504 aa20.61■□□□□ 0.89
SSBP3-203ENST00000371319 SBK1Q52WX2 424 aa20.61■□□□□ 0.89
SSBP3-203ENST00000371319 STK11IPQ8N1F8 1099 aa20.61■□□□□ 0.89
SSBP3-203ENST00000371319 LMBRD1Q9NUN5 540 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms