RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 FGD4Q96M96 766 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 GDAP1L1Q96MZ0 367 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 SELENOSQ9BQE4 189 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 ABCB6Q9NP58 842 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 TTF2Q9UNY4 1162 aaKnown RBP11.69□□□□□ -0.54
PRDM1-201ENST00000369089 WDR7Q9Y4E6 1490 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 FYB1O15117 783 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 MYBL2P10244 700 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 PLEKHO1Q53GL0 409 aaPredicted RBP11.69□□□□□ -0.54
PRDM1-201ENST00000369089 APLFQ8IW19 511 aaPredicted RBP11.69□□□□□ -0.54
PRDM1-201ENST00000369089 STMN4Q9H169 189 aaPredicted RBP11.69□□□□□ -0.54
PRDM1-201ENST00000369089 MAP4K4O95819 1239 aaPredicted RBP11.69□□□□□ -0.54
PRDM1-201ENST00000369089 SDSP20132 328 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 ARHGAP18Q8N392 663 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 KDM4CQ9H3R0 1056 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 CDC23Q9UJX2 597 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 PDCD7Q8N8D1 485 aaKnown RBP11.69□□□□□ -0.54
PRDM1-201ENST00000369089 FRMD4BQ9Y2L6 1034 aa11.69□□□□□ -0.54
PRDM1-201ENST00000369089 UBTFL1P0CB47 393 aaPredicted RBP11.68□□□□□ -0.54
PRDM1-201ENST00000369089 GSCP56915 257 aaPredicted RBP11.68□□□□□ -0.54
PRDM1-201ENST00000369089 APBA1Q02410 837 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 AIMP1Q12904 312 aaKnown RBP11.68□□□□□ -0.54
PRDM1-201ENST00000369089 SEPT2Q15019 361 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 TCERG1LQ5VWI1 586 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 INTS8Q75QN2 995 aaKnown RBP11.68□□□□□ -0.54
PRDM1-201ENST00000369089 PRAG1Q86YV5 1406 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 MSL3Q8N5Y2 521 aaKnown RBP11.68□□□□□ -0.54
PRDM1-201ENST00000369089 FAM167BQ9BTA0 163 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 TSPYL2Q9H2G4 693 aaPredicted RBP11.68□□□□□ -0.54
PRDM1-201ENST00000369089 PPP2R2CQ9Y2T4 447 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 A2MP01023 1474 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 FLOT1O75955 427 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 NFE2L2Q16236 605 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 OSBPL1AQ9BXW6 950 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 STXBP3O00186 592 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
PRDM1-201ENST00000369089 SKAP2O75563 359 aaPredicted RBP11.68□□□□□ -0.54
PRDM1-201ENST00000369089 SLC4A2P04920 1241 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 GNAI3P08754 354 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 RPS6KA3P51812 740 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 NME9Q86XW9 330 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.68□□□□□ -0.54
PRDM1-201ENST00000369089 CHAMP1Q96JM3 812 aa11.68□□□□□ -0.54
PRDM1-201ENST00000369089 SMIM23A6NLE4 172 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 KRT86O43790 486 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 GPTP24298 496 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
PRDM1-201ENST00000369089 PHLDB2Q86SQ0 1253 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 LARP6Q9BRS8 491 aaKnown RBP11.67□□□□□ -0.54
PRDM1-201ENST00000369089 UNC45AQ9H3U1 944 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 MYO1FO00160 1098 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 SASH1O94885 1247 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 GJA8P48165 433 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 FANCCQ00597 558 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 SLC44A4Q53GD3 710 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 FAM81AQ8TBF8 368 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 MRPS27Q92552 414 aaKnown RBP11.67□□□□□ -0.54
PRDM1-201ENST00000369089 ATP6V0A4Q9HBG4 840 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 GUCA1BQ9UMX6 200 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 TADA3O75528 432 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
PRDM1-201ENST00000369089 HSP90AA5PQ58FG0 334 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 IFT81Q8WYA0 676 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 PRDM16Q9HAZ2 1276 aa11.67□□□□□ -0.54
PRDM1-201ENST00000369089 SHANK2Q9UPX8 1470 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 LRRC31Q6UY01 552 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 SIL1Q9H173 461 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 TMEM165Q9HC07 324 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 GNAT1P11488 350 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 SKIP12755 728 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 OLFML1Q6UWY5 402 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 TESK2Q96S53 571 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 XPO4Q9C0E2 1151 aaKnown RBP11.66□□□□□ -0.54
PRDM1-201ENST00000369089 ITGB1BP2Q9UKP3 347 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 EXOC6BQ9Y2D4 811 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 ZNF711Q9Y462 761 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 SAMD9Q5K651 1589 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 AKR1B15C9JRZ8 316 aaPredicted RBP11.66□□□□□ -0.54
PRDM1-201ENST00000369089 UBE4AQ14139 1066 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 CCDC152Q4G0S7 254 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 PREPLQ4J6C6 727 aaPredicted RBP11.66□□□□□ -0.54
PRDM1-201ENST00000369089 ZNF518AQ6AHZ1 1483 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 CCDC178Q5BJE1 867 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 TEX9Q8N6V9 391 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 IGSF22Q8N9C0 903 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 HELLSQ9NRZ9 838 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 AMOTL2Q9Y2J4 779 aa11.66□□□□□ -0.54
PRDM1-201ENST00000369089 SPECC1L-ADORA2AF8WAN1 911 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 KRT83P78385 493 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 Q4G0T1 1027 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 PHLDB3Q6NSJ2 640 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 TRIML1Q8N9V2 468 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 CCDC197Q8NCU1 140 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 hCG_2014768A0A024R1R8 64 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 PARP1P09874 1014 aaKnown RBP11.65□□□□□ -0.54
PRDM1-201ENST00000369089 CYLC1P35663 651 aaPredicted RBP11.65□□□□□ -0.54
PRDM1-201ENST00000369089 KRT32Q14532 448 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 CFAP157Q5JU67 520 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 PROCA1Q8NCQ7 364 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms