RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 SLC35F6Q8N357 371 aa17.14■□□□□ 0.33
SHC1-205ENST00000368453 SMARCC1Q92922 1105 aaPredicted RBP17.14■□□□□ 0.33
SHC1-205ENST00000368453 ZNF274Q96GC6 653 aaPredicted RBP17.14■□□□□ 0.33
SHC1-205ENST00000368453 SAMSN1Q9NSI8 373 aaKnown RBP17.14■□□□□ 0.33
SHC1-205ENST00000368453 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
SHC1-205ENST00000368453 CHD2O14647 1828 aaKnown RBP17.13■□□□□ 0.33
SHC1-205ENST00000368453 RNF40O75150 1001 aa17.13■□□□□ 0.33
SHC1-205ENST00000368453 ZNF530Q6P9A1 599 aaPredicted RBP17.13■□□□□ 0.33
SHC1-205ENST00000368453 BRAPQ7Z569 592 aa17.13■□□□□ 0.33
SHC1-205ENST00000368453 AFAP1L1Q8TED9 768 aa17.13■□□□□ 0.33
SHC1-205ENST00000368453 RIN2Q8WYP3 895 aaPredicted RBP17.13■□□□□ 0.33
SHC1-205ENST00000368453 GBP3Q9H0R5 595 aa17.13■□□□□ 0.33
SHC1-205ENST00000368453 HOOK1Q9UJC3 728 aaKnown RBP17.13■□□□□ 0.33
SHC1-205ENST00000368453 LRRIQ3A6PVS8 624 aaPredicted RBP17.13■□□□□ 0.33
SHC1-205ENST00000368453 AKR1B15C9JRZ8 316 aaPredicted RBP17.13■□□□□ 0.33
SHC1-205ENST00000368453 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
SHC1-205ENST00000368453 SHC4Q6S5L8 630 aa17.13■□□□□ 0.33
SHC1-205ENST00000368453 JMYQ8N9B5 988 aa17.13■□□□□ 0.33
SHC1-205ENST00000368453 PEAK1Q9H792 1746 aa17.13■□□□□ 0.33
SHC1-205ENST00000368453 RAI14Q9P0K7 980 aa17.13■□□□□ 0.33
SHC1-205ENST00000368453 USP6P35125 1406 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 FOXP4Q8IVH2 680 aaPredicted RBP17.12■□□□□ 0.33
SHC1-205ENST00000368453 HINFPQ9BQA5 517 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 TUBE1Q9UJT0 475 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 NRKQ7Z2Y5 1582 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 STX17P56962 302 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 HNRNPLLQ8WVV9 542 aaKnown RBP17.12■□□□□ 0.33
SHC1-205ENST00000368453 MYD88Q99836 296 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 SALL1Q9NSC2 1324 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 PPFIA4O75335 1185 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 RAD9BQ6WBX8 426 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 TADA2BQ86TJ2 420 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 METTL16Q86W50 562 aaKnown RBP17.12■□□□□ 0.33
SHC1-205ENST00000368453 KCNH3Q9ULD8 1083 aa17.12■□□□□ 0.33
SHC1-205ENST00000368453 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
SHC1-205ENST00000368453 KIF23Q02241 960 aaPredicted RBP17.11■□□□□ 0.33
SHC1-205ENST00000368453 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
SHC1-205ENST00000368453 NOA1Q8NC60 698 aaKnown RBP17.11■□□□□ 0.33
SHC1-205ENST00000368453 ZMYND10O75800 440 aa17.11■□□□□ 0.33
SHC1-205ENST00000368453 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
SHC1-205ENST00000368453 NCAPH2Q6IBW4 605 aa17.11■□□□□ 0.33
SHC1-205ENST00000368453 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
SHC1-205ENST00000368453 KBTBD3Q8NAB2 608 aa17.11■□□□□ 0.33
SHC1-205ENST00000368453 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.11■□□□□ 0.33
SHC1-205ENST00000368453 ADGRG1Q9Y653 693 aa17.11■□□□□ 0.33
SHC1-205ENST00000368453 CACNA1FO60840 1977 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 TEX33O43247 280 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 ERLIN2O94905 339 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
SHC1-205ENST00000368453 CCT5P48643 541 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 EFCAB13Q8IY85 973 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 IGSF22Q8N9C0 903 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 ACRBPQ8NEB7 543 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 PRC1O43663 620 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 TIMM10P62072 90 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 RBL2Q08999 1139 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 MMS22LQ6ZRQ5 1243 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 CCDC91Q7Z6B0 441 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 GRAMD1CQ8IYS0 662 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 ALG1Q9BT22 464 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 TBX2Q13207 712 aaPredicted RBP17.1■□□□□ 0.33
SHC1-205ENST00000368453 HSP90AB3PQ58FF7 597 aa17.1■□□□□ 0.33
SHC1-205ENST00000368453 RALYLQ86SE5 291 aaKnown RBP17.1■□□□□ 0.33
SHC1-205ENST00000368453 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 BMP6P22004 513 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 VPS37DQ86XT2 251 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 RAB21Q9UL25 225 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 C3P01024 1663 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 ABL1P00519 1130 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 HOXB7P09629 217 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 MCTP2Q6DN12 878 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 MSANTD4Q8NCY6 345 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 PAG1Q9NWQ8 432 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
SHC1-205ENST00000368453 A0A087WUV0 522 aaPredicted RBP17.08■□□□□ 0.33
SHC1-205ENST00000368453 FKBP4Q02790 459 aaKnown RBP eCLIP17.08■□□□□ 0.33
SHC1-205ENST00000368453 UBE3BQ7Z3V4 1068 aa17.08■□□□□ 0.33
SHC1-205ENST00000368453 CCDC148Q8NFR7 591 aa17.08■□□□□ 0.33
SHC1-205ENST00000368453 NAPGQ99747 312 aaPredicted RBP17.08■□□□□ 0.33
SHC1-205ENST00000368453 HAUS7Q99871 368 aa17.08■□□□□ 0.33
SHC1-205ENST00000368453 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.33
SHC1-205ENST00000368453 IBSPP21815 317 aaPredicted RBP17.08■□□□□ 0.32
SHC1-205ENST00000368453 USP5P45974 858 aa17.08■□□□□ 0.32
SHC1-205ENST00000368453 TTC19Q6DKK2 380 aaPredicted RBP17.08■□□□□ 0.32
SHC1-205ENST00000368453 PHKBQ93100 1093 aa17.08■□□□□ 0.32
SHC1-205ENST00000368453 CRACR2AQ9BSW2 395 aa17.08■□□□□ 0.32
SHC1-205ENST00000368453 MED4Q9NPJ6 270 aa17.08■□□□□ 0.32
SHC1-205ENST00000368453 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.32
SHC1-205ENST00000368453 IGKV5-2P06315 115 aa17.07■□□□□ 0.32
SHC1-205ENST00000368453 PRR29P0C7W0 189 aa17.07■□□□□ 0.32
SHC1-205ENST00000368453 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
SHC1-205ENST00000368453 FBXW10Q5XX13 1052 aa17.07■□□□□ 0.32
SHC1-205ENST00000368453 NUTM2AQ8IVF1 878 aaPredicted RBP17.07■□□□□ 0.32
SHC1-205ENST00000368453 CAPZA3Q96KX2 299 aa17.07■□□□□ 0.32
SHC1-205ENST00000368453 MAN1B1Q9UKM7 699 aa17.07■□□□□ 0.32
SHC1-205ENST00000368453 EBAG9O00559 213 aa17.07■□□□□ 0.32
SHC1-205ENST00000368453 RPS6KA5O75582 802 aa17.07■□□□□ 0.32
SHC1-205ENST00000368453 TRDNQ13061 729 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms