RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ZSWIM6Q9HCJ5 1215 aa13.6□□□□□ -0.23
USF1-201ENST00000368019 CWC25Q9NXE8 425 aaPredicted RBP13.6□□□□□ -0.23
USF1-201ENST00000368019 GGA1Q9UJY5 639 aa13.6□□□□□ -0.23
USF1-201ENST00000368019 SPEF2Q9C093 1822 aa13.6□□□□□ -0.23
USF1-201ENST00000368019 ADM5C9JUS6 153 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 ALDH1L1O75891 902 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 UFL1O94874 794 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 PDCP20941 246 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 RGS19P49795 217 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
USF1-201ENST00000368019 RBM10P98175 930 aaKnown RBP13.59□□□□□ -0.23
USF1-201ENST00000368019 KIF4BQ2VIQ3 1234 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 FOXD4L5Q5VV16 416 aaPredicted RBP13.59□□□□□ -0.23
USF1-201ENST00000368019 RGMBQ6NW40 437 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.59□□□□□ -0.23
USF1-201ENST00000368019 FOXD4L4Q8WXT5 416 aaPredicted RBP13.59□□□□□ -0.23
USF1-201ENST00000368019 DCPSQ96C86 337 aaKnown RBP13.59□□□□□ -0.23
USF1-201ENST00000368019 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 CHAMP1Q96JM3 812 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 GMLQ99445 158 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 GBA2Q9HCG7 927 aaPredicted RBP13.59□□□□□ -0.23
USF1-201ENST00000368019 MTMR6Q9Y217 621 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 CNPY2Q9Y2B0 182 aa13.59□□□□□ -0.23
USF1-201ENST00000368019 ASTN2O75129 1339 aaPredicted RBP13.59□□□□□ -0.23
USF1-201ENST00000368019 SURF6O75683 361 aaKnown RBP13.58□□□□□ -0.24
USF1-201ENST00000368019 CAVIN2O95810 425 aa13.58□□□□□ -0.24
USF1-201ENST00000368019 IGKV5-2P06315 115 aa13.58□□□□□ -0.24
USF1-201ENST00000368019 CCDC192P0DO97 292 aa13.58□□□□□ -0.24
USF1-201ENST00000368019 AGBL3Q8NEM8 1001 aa13.58□□□□□ -0.24
USF1-201ENST00000368019 KIAA1524Q8TCG1 905 aa13.58□□□□□ -0.24
USF1-201ENST00000368019 ANKIB1Q9P2G1 1089 aa13.58□□□□□ -0.24
USF1-201ENST00000368019 KIF3AQ9Y496 699 aa13.58□□□□□ -0.24
USF1-201ENST00000368019 XDHP47989 1333 aa13.58□□□□□ -0.24
USF1-201ENST00000368019 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
USF1-201ENST00000368019 PSMA5P28066 241 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 CHAF1AQ13111 956 aaPredicted RBP13.57□□□□□ -0.24
USF1-201ENST00000368019 ANKRD1Q15327 319 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 DNTTIP2Q5QJE6 756 aaKnown RBP13.57□□□□□ -0.24
USF1-201ENST00000368019 TSHZ3Q63HK5 1081 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 RSBN1LQ6PCB5 846 aaPredicted RBP13.57□□□□□ -0.24
USF1-201ENST00000368019 KSR2Q6VAB6 950 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 RBM43Q6ZSC3 357 aaKnown RBP13.57□□□□□ -0.24
USF1-201ENST00000368019 ANKRD18AQ8IVF6 992 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 C2orf69Q8N8R5 385 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 CCDC85AQ96PX6 553 aaPredicted RBP13.57□□□□□ -0.24
USF1-201ENST00000368019 MCOLN1Q9GZU1 580 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 GGA3Q9NZ52 723 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 MAP3K2Q9Y2U5 619 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 TNRC18O15417 2968 aaPredicted RBP13.57□□□□□ -0.24
USF1-201ENST00000368019 RFX7Q2KHR2 1363 aa13.57□□□□□ -0.24
USF1-201ENST00000368019 MYH15Q9Y2K3 1946 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 PI4KAP2A4QPH2 592 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 WTIPA6NIX2 430 aaPredicted RBP13.56□□□□□ -0.24
USF1-201ENST00000368019 CCDC85CA6NKD9 419 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 KRT85P78386 507 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 PODNQ7Z5L7 613 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 PI4KAP1Q8N8J0 262 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 TTLL11Q8NHH1 800 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 FAM200AQ8TCP9 573 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 EVI5LQ96CN4 794 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 IL25Q9H293 177 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 PRDM4Q9UKN5 801 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 CYP46A1Q9Y6A2 500 aa13.56□□□□□ -0.24
USF1-201ENST00000368019 G3V3G9 751 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 GJB2P29033 226 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 CTSWP56202 376 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 KIF23Q02241 960 aaPredicted RBP13.55□□□□□ -0.24
USF1-201ENST00000368019 SCARF1Q14162 830 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 NECTIN1Q15223 517 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 SULF1Q8IWU6 871 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
USF1-201ENST00000368019 CDCA5Q96FF9 252 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 IL1RAPL2Q9NP60 686 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 ECHDC1Q9NTX5 307 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 PDRG1Q9NUG6 133 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 DDX19AQ9NUU7 478 aaKnown RBP13.55□□□□□ -0.24
USF1-201ENST00000368019 MINPP1Q9UNW1 487 aa13.55□□□□□ -0.24
USF1-201ENST00000368019 PAPPA2Q9BXP8 1791 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 USP17L3A6NCW0 530 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 USP17L4A6NCW7 530 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 H7C1W4 665 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 SRGAP3O43295 1099 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 CTIFO43310 598 aaKnown RBP13.54□□□□□ -0.24
USF1-201ENST00000368019 SLC10A3P09131 477 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 ZKSCAN1P17029 563 aaPredicted RBP13.54□□□□□ -0.24
USF1-201ENST00000368019 ZNF157P51786 506 aaPredicted RBP13.54□□□□□ -0.24
USF1-201ENST00000368019 TSGA10IPQ3SY00 556 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
USF1-201ENST00000368019 NOL8Q76FK4 1167 aaKnown RBP13.54□□□□□ -0.24
USF1-201ENST00000368019 USP17L1Q7RTZ2 530 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 CDC5LQ99459 802 aaKnown RBP13.54□□□□□ -0.24
USF1-201ENST00000368019 GTPBP4Q9BZE4 634 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms