RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 TOB2Q14106 344 aaPredicted RBP12.86□□□□□ -0.35
H3F3A-202ENST00000366814 UBE3CQ15386 1083 aa12.86□□□□□ -0.35
H3F3A-202ENST00000366814 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
H3F3A-202ENST00000366814 Q6ZUG5 572 aa12.86□□□□□ -0.35
H3F3A-202ENST00000366814 SLC51AQ86UW1 340 aa12.86□□□□□ -0.35
H3F3A-202ENST00000366814 HELBQ8NG08 1087 aaPredicted RBP12.86□□□□□ -0.35
H3F3A-202ENST00000366814 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
H3F3A-202ENST00000366814 MAP3K12Q12852 859 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 SLC9C2Q5TAH2 1124 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 DPP8Q6V1X1 898 aaPredicted RBP12.85□□□□□ -0.35
H3F3A-202ENST00000366814 MPNDQ8N594 471 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 SPATA5Q8NB90 893 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 TAF6LQ9Y6J9 622 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 LAMA4Q16363 1823 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 E7EWF7 191 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 GPAA1O43292 621 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 CHRNDQ07001 517 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 SLFNL1Q499Z3 407 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 PI16Q6UXB8 463 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 TMC4Q7Z404 712 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 SUPT20HQ8NEM7 779 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 CELF1Q92879 486 aaKnown RBP12.85□□□□□ -0.35
H3F3A-202ENST00000366814 TCEANC2Q96MN5 208 aa12.85□□□□□ -0.35
H3F3A-202ENST00000366814 GNL3LQ9NVN8 582 aaKnown RBP12.85□□□□□ -0.35
H3F3A-202ENST00000366814 F13A1P00488 732 aa12.84□□□□□ -0.35
H3F3A-202ENST00000366814 MRE11P49959 708 aa12.84□□□□□ -0.35
H3F3A-202ENST00000366814 RBM46Q8TBY0 533 aaKnown RBP12.84□□□□□ -0.35
H3F3A-202ENST00000366814 KIF3AQ9Y496 699 aa12.84□□□□□ -0.35
H3F3A-202ENST00000366814 FSD2A1L4K1 749 aa12.83□□□□□ -0.36
H3F3A-202ENST00000366814 ZNF213O14771 459 aa12.83□□□□□ -0.36
H3F3A-202ENST00000366814 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
H3F3A-202ENST00000366814 EIF6P56537 245 aaKnown RBP12.83□□□□□ -0.36
H3F3A-202ENST00000366814 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
H3F3A-202ENST00000366814 LARP1BQ659C4 914 aaKnown RBP12.83□□□□□ -0.36
H3F3A-202ENST00000366814 GTF3C6Q969F1 213 aa12.83□□□□□ -0.36
H3F3A-202ENST00000366814 SYAP1Q96A49 352 aaPredicted RBP12.83□□□□□ -0.36
H3F3A-202ENST00000366814 PUS7LQ9H0K6 701 aaKnown RBP12.83□□□□□ -0.36
H3F3A-202ENST00000366814 BSDC1Q9NW68 430 aaPredicted RBP12.83□□□□□ -0.36
H3F3A-202ENST00000366814 DOCK2Q92608 1830 aa12.83□□□□□ -0.36
H3F3A-202ENST00000366814 SNED1Q8TER0 1413 aa12.83□□□□□ -0.36
H3F3A-202ENST00000366814 VPS37CA5D8V6 355 aaPredicted RBP12.82□□□□□ -0.36
H3F3A-202ENST00000366814 PDE6AP16499 860 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 UBE4AQ14139 1066 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 AOC3Q16853 763 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 STOX1Q6ZVD7 989 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 RALYLQ86SE5 291 aaKnown RBP12.82□□□□□ -0.36
H3F3A-202ENST00000366814 NIM1KQ8IY84 436 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 BRF1Q92994 677 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 AIDAQ96BJ3 306 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
H3F3A-202ENST00000366814 ZNF541Q9H0D2 1346 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 ZNF532Q9HCE3 1301 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 POTECB2RU33 542 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 FZD9O00144 591 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 FGAP02671 866 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 TRDNQ13061 729 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 STK3Q13188 491 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 CAVIN1Q6NZI2 390 aaKnown RBP12.82□□□□□ -0.36
H3F3A-202ENST00000366814 LLPHQ9BRT6 129 aaKnown RBP12.82□□□□□ -0.36
H3F3A-202ENST00000366814 VPS33BQ9H267 617 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 NSFL1CQ9UNZ2 370 aaKnown RBP12.82□□□□□ -0.36
H3F3A-202ENST00000366814 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
H3F3A-202ENST00000366814 HSPA6P17066 643 aa12.81□□□□□ -0.36
H3F3A-202ENST00000366814 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
H3F3A-202ENST00000366814 RASGRF1Q13972 1273 aa12.81□□□□□ -0.36
H3F3A-202ENST00000366814 CAVIN4Q5BKX8 364 aa12.81□□□□□ -0.36
H3F3A-202ENST00000366814 NCOA7Q8NI08 942 aa12.81□□□□□ -0.36
H3F3A-202ENST00000366814 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
H3F3A-202ENST00000366814 RTFDC1Q9BY42 306 aaPredicted RBP12.81□□□□□ -0.36
H3F3A-202ENST00000366814 GJA3Q9Y6H8 435 aa12.81□□□□□ -0.36
H3F3A-202ENST00000366814 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 PFKFB2O60825 505 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 APPP05067 770 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 MCM5P33992 734 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 HMGN5P82970 282 aaKnown RBP12.8□□□□□ -0.36
H3F3A-202ENST00000366814 EXOSC10Q01780 885 aaKnown RBP12.8□□□□□ -0.36
H3F3A-202ENST00000366814 FSTL1Q12841 308 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 VPS37DQ86XT2 251 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 FBXL16Q8N461 479 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 FAM184AQ8NB25 1140 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 TMEM87AQ8NBN3 555 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 SMC1BQ8NDV3 1235 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 AGXT2Q9BYV1 514 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 MTMR6Q9Y217 621 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 A0A1B0GUL6 1792 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 ZMYM6O95789 1325 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 WDR19Q8NEZ3 1342 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 C6orf229H3BNL8 230 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 GNAT2P19087 354 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 TTLL5Q6EMB2 1281 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 ZNF274Q96GC6 653 aaPredicted RBP12.8□□□□□ -0.36
H3F3A-202ENST00000366814 ANKRD2Q9GZV1 360 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 GRPEL1Q9HAV7 217 aa12.8□□□□□ -0.36
H3F3A-202ENST00000366814 MYO5AQ9Y4I1 1855 aaKnown RBP12.79□□□□□ -0.36
H3F3A-202ENST00000366814 BCAMP50895 628 aa12.79□□□□□ -0.36
H3F3A-202ENST00000366814 HAND2P61296 217 aa12.79□□□□□ -0.36
H3F3A-202ENST00000366814 GPSM2P81274 684 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms