RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 SYCP1Q15431 976 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 TMED8Q6PL24 325 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 CRNKL1Q9BZJ0 848 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 RCOR1Q9UKL0 485 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 SLC4A4Q9Y6R1 1079 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 ZNF444Q8N0Y2 327 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 ZBTB38Q8NAP3 1195 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 MYCBPQ99417 103 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 H7C1W4 665 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 HSPD1P10809 573 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 ARHGAP29Q52LW3 1261 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 MICU3Q86XE3 530 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 MLKLQ8NB16 471 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 RSRC1Q96IZ7 334 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 CEP63Q96MT8 703 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 TRMT1Q9NXH9 659 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 ABCC12Q96J65 1359 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 SALL3Q9BXA9 1300 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 GSTO1P78417 241 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 ADCK5Q3MIX3 580 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 KRI1Q8N9T8 703 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 IL17RAQ96F46 866 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 NYXQ9GZU5 481 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 MKNK2Q9HBH9 465 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 CALML3P27482 149 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 FAM114A1Q8IWE2 563 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 DBNLQ9UJU6 430 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 RGS22Q8NE09 1264 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 HEG1Q9ULI3 1381 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 GPAA1O43292 621 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 PPP6R2O75170 966 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 IFIT1BQ5T764 474 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 MSL1Q68DK7 614 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 RTEL1Q9NZ71 1219 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 ZDHHC9Q9Y397 364 aa6.1□□□□□ -1.43
CDC42BPA-204ENST00000366767 PCP11498 1178 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 ITGA6P23229 1130 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 WDR19Q8NEZ3 1342 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 FKBP15Q5T1M5 1219 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 CCDC129Q6ZRS4 1044 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 KLHDC4Q8TBB5 520 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 KCNB2Q92953 911 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 DENND2AQ9ULE3 1009 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 MAGEB6P1A0A0J9YX57 407 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 TRIM75PA6NK02 468 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 JAK2O60674 1132 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 BAG3O95817 575 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 CCDC175P0C221 793 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 CEP57Q86XR8 500 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 CYP7A1P22680 504 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 CMA1P23946 247 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 PDIA3P30101 505 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 KRT2P35908 639 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 USP5P45974 858 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 NAA25Q14CX7 972 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 ZFYVE27Q5T4F4 411 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 TSPOAP1O95153 1857 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 RANBP6O60518 1105 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 SMC1AQ14683 1233 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 KIF4BQ2VIQ3 1234 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 RABL6Q3YEC7 729 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 KAT14Q9H8E8 782 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 KIAA1468Q9P260 1216 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 A0A1B0GUA9 196 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 A1BGP04217 495 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 CYP21A2P08686 494 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 CAPN2P17655 700 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 LRCH2Q5VUJ6 765 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 MYSM1Q5VVJ2 828 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 NUTM2AQ8IVF1 878 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 CEP112Q8N8E3 955 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 EHBP1Q8NDI1 1231 aa6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.09□□□□□ -1.439e-7■■■■■ 149.5
CDC42BPA-204ENST00000366767 BCCIPQ9P287 314 aaKnown RBP eCLIP6.09□□□□□ -1.43
CDC42BPA-204ENST00000366767 PLEKHG2Q9H7P9 1386 aa6.09□□□□□ -1.44
CDC42BPA-204ENST00000366767 SPECC1LQ69YQ0 1117 aa6.09□□□□□ -1.44
CDC42BPA-204ENST00000366767 MRVI1Q9Y6F6 885 aa6.09□□□□□ -1.44
CDC42BPA-204ENST00000366767 GABPB1Q06547 395 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 RESTQ13127 1097 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 SEPT6Q14141 434 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 SARM1Q6SZW1 724 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 DAAM2Q86T65 1068 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 CERS3Q8IU89 383 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 CARD10Q9BWT7 1032 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 TMX1Q9H3N1 280 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 SCRN1Q12765 414 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 PROSER3Q2NL68 480 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 TRIML1Q8N9V2 468 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 ANKRD2Q9GZV1 360 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 TCP11L1Q9NUJ3 509 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 A0A1B0GVL5 298 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 BIN1O00499 593 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 TRIM14Q14142 442 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 USPL1Q5W0Q7 1092 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 FCHSD1Q86WN1 690 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 DZIP1Q86YF9 867 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 NSUN7Q8NE18 718 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 ZNF622Q969S3 477 aaKnown RBP eCLIP6.08□□□□□ -1.443e-7■■□□□ 13.1
CDC42BPA-204ENST00000366767 SWAP70Q9UH65 585 aa6.08□□□□□ -1.44
CDC42BPA-204ENST00000366767 CCDC194A0A1B0GVG4 234 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms