RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SAMM50Q9Y512 469 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 ATP5JP18859 108 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 CYP26C1Q6V0L0 522 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 CCDC65Q8IXS2 484 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 CCDC51Q96ER9 411 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 LARP6Q9BRS8 491 aaKnown RBP13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 MACROD2A1Z1Q3 448 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 LDHBP07195 334 aaKnown RBP13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 DDB1Q16531 1140 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 SCLT1Q96NL6 688 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 PLEKHG1Q9ULL1 1385 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 HOXA7P31268 230 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 APBB1IPQ7Z5R6 666 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 TTC6Q86TZ1 520 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 TSNARE1Q96NA8 513 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 KCNH3Q9ULD8 1083 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 NIP7Q9Y221 180 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 TMEM2Q9UHN6 1383 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 EYA3Q99504 573 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 SWAP70Q9UH65 585 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 YEATS2Q9ULM3 1422 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 CEBPAP49715 358 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 MCTP2Q6DN12 878 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 TMTC1Q8IUR5 882 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 SETBP1Q9Y6X0 1596 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 ANXA1P04083 346 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 GABPB1Q06547 395 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 CCDC129Q6ZRS4 1044 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 B4GALNT4Q76KP1 1039 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 CEP83Q9Y592 693 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 APOBRQ0VD83 1088 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 RNF187Q5TA31 235 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 CSRNP2Q9H175 543 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 KDM6BO15054 1643 aa13.55□□□□□ -0.24
CDC42BPA-203ENST00000366766 PPP2R5EQ16537 467 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 SSH3Q8TE77 659 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 MTUS1Q9ULD2 1270 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 SYNRGQ9UMZ2 1314 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 ATP2A2P16615 1042 aaKnown RBP13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 TRMT2AQ8IZ69 625 aaKnown RBP13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 KCNG1Q9UIX4 513 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 LRRC2Q9BYS8 371 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 IQCGQ9H095 443 aaKnown RBP13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 RBM26Q5T8P6 1007 aaKnown RBP13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 MYRIPQ8NFW9 859 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 SLC52A2Q9HAB3 445 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 LEO1Q8WVC0 666 aaPredicted RBP13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 BRD1O95696 1058 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 PARP1P09874 1014 aaKnown RBP13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 WDR66Q8TBY9 1149 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 DHX58Q96C10 678 aa13.54□□□□□ -0.24
CDC42BPA-203ENST00000366766 MCM6Q14566 821 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 CWF19L2Q2TBE0 894 aaKnown RBP13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 SMARCC2Q8TAQ2 1214 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 GTF3C6Q969F1 213 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 CCDC26Q8TAB7 109 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 MCM9Q9NXL9 1143 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 PTGS1P23219 599 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 SV2BQ7L1I2 683 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 TRIML1Q8N9V2 468 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 A0A1B0GUL7 405 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 FRMD4BQ9Y2L6 1034 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 BCCIPQ9P287 314 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 PA2G4Q9UQ80 394 aaKnown RBP13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 NBPF11Q86T75 865 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 CDC42BPGQ6DT37 1551 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 ERVV-2B6SEH9 535 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 ZNF75DP51815 510 aa13.53□□□□□ -0.24
CDC42BPA-203ENST00000366766 CFAP58Q5T655 872 aa13.52□□□□□ -0.24
CDC42BPA-203ENST00000366766 OSBPL3Q9H4L5 887 aa13.52□□□□□ -0.24
CDC42BPA-203ENST00000366766 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.24
CDC42BPA-203ENST00000366766 TCEANC2Q96MN5 208 aa13.52□□□□□ -0.24
CDC42BPA-203ENST00000366766 FAM13AO94988 1023 aa13.52□□□□□ -0.24
CDC42BPA-203ENST00000366766 UBE2Q2Q8WVN8 375 aa13.52□□□□□ -0.24
CDC42BPA-203ENST00000366766 BICD1Q96G01 975 aa13.52□□□□□ -0.24
CDC42BPA-203ENST00000366766 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.243e-7■■■■□ 22.8
CDC42BPA-203ENST00000366766 GCKRQ14397 625 aa13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 SPATA24Q86W54 205 aa13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 SMAP1Q8IYB5 467 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 FAM76AQ8TAV0 307 aa13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 KIAA1524Q8TCG1 905 aa13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 HOMER2Q9NSB8 354 aa13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 A0A1W2PRG0 241 aa13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 CAPN2P17655 700 aa13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 LPIN2Q92539 896 aa13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 NAPGQ99747 312 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 ADGRL3Q9HAR2 1447 aa13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 RTCBQ9Y3I0 505 aaKnown RBP13.52□□□□□ -0.25
CDC42BPA-203ENST00000366766 RNF17Q9BXT8 1623 aaKnown RBP13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 PDE8AO60658 829 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 KIFAP3Q92845 792 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 SYNCQ9H7C4 482 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 SEC24BO95487 1268 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 SLC39A6Q13433 755 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 MAGEF1Q9HAY2 307 aa13.51□□□□□ -0.25
CDC42BPA-203ENST00000366766 ZNF202O95125 648 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms