RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 AOC2O75106 756 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 GSTP1P09211 210 aaKnown RBP8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 ADH5P11766 374 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 EIF4BP23588 611 aaKnown RBP8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 RXRBP28702 533 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 COL19A1Q14993 1142 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 UVSSAQ2YD98 709 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 BEND4Q6ZU67 534 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 DYMQ7RTS9 669 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 PDZD3Q86UT5 571 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 FBLIM1Q8WUP2 373 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 WDR18Q9BV38 432 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 SRCIN1Q9C0H9 1055 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 C7orf69Q9H7B7 122 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 CBX8Q9HC52 389 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 PPP1R9AQ9ULJ8 1098 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 AK5Q9Y6K8 562 aa8.15□□□□□ -1.1
RNU4-28P-201ENST00000364739 CELA3AP09093 270 aa8.14□□□□□ -1.11
RNU4-28P-201ENST00000364739 FSTP19883 344 aa8.14□□□□□ -1.11
RNU4-28P-201ENST00000364739 MAP4P27816 1152 aaKnown RBP8.14□□□□□ -1.11
RNU4-28P-201ENST00000364739 USP11P51784 963 aa8.14□□□□□ -1.11
RNU4-28P-201ENST00000364739 RASIP1Q5U651 963 aa8.14□□□□□ -1.11
RNU4-28P-201ENST00000364739 MAP1SQ66K74 1059 aaPredicted RBP8.14□□□□□ -1.11
RNU4-28P-201ENST00000364739 AP4E1Q9UPM8 1137 aa8.14□□□□□ -1.11
RNU4-28P-201ENST00000364739 ACTL7BQ9Y614 415 aa8.14□□□□□ -1.11
RNU4-28P-201ENST00000364739 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
RNU4-28P-201ENST00000364739 BMP6P22004 513 aa8.13□□□□□ -1.11
RNU4-28P-201ENST00000364739 ARNTP27540 789 aa8.13□□□□□ -1.11
RNU4-28P-201ENST00000364739 TRIM26Q12899 539 aaPredicted RBP8.13□□□□□ -1.11
RNU4-28P-201ENST00000364739 NME2P22392 152 aa8.12□□□□□ -1.11
RNU4-28P-201ENST00000364739 PSMD2Q13200 908 aa8.12□□□□□ -1.11
RNU4-28P-201ENST00000364739 CLEC10AQ8IUN9 316 aa8.12□□□□□ -1.11
RNU4-28P-201ENST00000364739 SHISA5Q8N114 240 aa8.12□□□□□ -1.11
RNU4-28P-201ENST00000364739 FAM83CQ9BQN1 747 aa8.12□□□□□ -1.11
RNU4-28P-201ENST00000364739 LGR6Q9HBX8 967 aa8.12□□□□□ -1.11
RNU4-28P-201ENST00000364739 FAM105AQ9NUU6 356 aa8.12□□□□□ -1.11
RNU4-28P-201ENST00000364739 TTF2Q9UNY4 1162 aaKnown RBP8.12□□□□□ -1.11
RNU4-28P-201ENST00000364739 RAB6AP20340 208 aa8.11□□□□□ -1.11
RNU4-28P-201ENST00000364739 ASPAP45381 313 aa8.11□□□□□ -1.11
RNU4-28P-201ENST00000364739 DAB2P98082 770 aa8.11□□□□□ -1.11
RNU4-28P-201ENST00000364739 XPCQ01831 940 aaPredicted RBP8.11□□□□□ -1.11
RNU4-28P-201ENST00000364739 NFKBIBQ15653 356 aa8.11□□□□□ -1.11
RNU4-28P-201ENST00000364739 TMCO4Q5TGY1 634 aa8.11□□□□□ -1.11
RNU4-28P-201ENST00000364739 MEI1Q5TIA1 1274 aa8.11□□□□□ -1.11
RNU4-28P-201ENST00000364739 FRMD6Q96NE9 622 aa8.11□□□□□ -1.11
RNU4-28P-201ENST00000364739 CEP44Q9C0F1 390 aa8.11□□□□□ -1.11
RNU4-28P-201ENST00000364739 NFICP08651 508 aa8.1□□□□□ -1.11
RNU4-28P-201ENST00000364739 GPBAR1Q8TDU6 330 aa8.1□□□□□ -1.11
RNU4-28P-201ENST00000364739 PPM1HQ9ULR3 514 aa8.1□□□□□ -1.11
RNU4-28P-201ENST00000364739 RNF112Q9ULX5 631 aa8.1□□□□□ -1.11
RNU4-28P-201ENST00000364739 FAM95CA0A1B0GW59 222 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 TMPRSS2O15393 492 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 IGLV1-40P01703 118 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 CTSHP09668 335 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 ZNF252P-AS1Q0IIN9 211 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 NFIAQ12857 509 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 HP1BP3Q5SSJ5 553 aaPredicted RBP8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 RNF43Q68DV7 783 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 MFSD14AQ96MC6 490 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 HIF3AQ9Y2N7 669 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 CSADQ9Y600 493 aa8.09□□□□□ -1.11
RNU4-28P-201ENST00000364739 SLFN14P0C7P3 912 aa8.08□□□□□ -1.12
RNU4-28P-201ENST00000364739 MAP3K11Q16584 847 aa8.08□□□□□ -1.12
RNU4-28P-201ENST00000364739 KIF4BQ2VIQ3 1234 aa8.08□□□□□ -1.12
RNU4-28P-201ENST00000364739 PCNX4Q63HM2 1172 aa8.08□□□□□ -1.12
RNU4-28P-201ENST00000364739 FBXL6Q8N531 539 aa8.08□□□□□ -1.12
RNU4-28P-201ENST00000364739 BCL2L13Q9BXK5 485 aa8.08□□□□□ -1.12
RNU4-28P-201ENST00000364739 BTBD11A6QL63 1104 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 DYNC1LI2O43237 492 aaPredicted RBP8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 FGD1P98174 961 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 PTPN11Q06124 597 aaPredicted RBP8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 CCDC85BQ15834 202 aaPredicted RBP8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 TMC4Q7Z404 712 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 GIPC2Q8TF65 315 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 ACSBG1Q96GR2 724 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 FANCD2OSQ96PS1 177 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 EMILIN2Q9BXX0 1053 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 SEMA6CQ9H3T2 930 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 DISC1Q9NRI5 854 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 KRT82Q9NSB4 513 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 CRIM1Q9NZV1 1036 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 PCDHGC5Q9Y5F6 944 aa8.07□□□□□ -1.12
RNU4-28P-201ENST00000364739 F6X3S4 739 aa8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 ERCC3P19447 782 aa8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 ADMP35318 185 aa8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 MFAP1P55081 439 aaKnown RBP8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 ID3Q02535 119 aa8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 SHKBP1Q8TBC3 707 aa8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 GSX1Q9H4S2 264 aaPredicted RBP8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 ACSS3Q9H6R3 686 aa8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 GOLGA2P5Q9HBQ8 144 aa8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 DAGLAQ9Y4D2 1042 aa8.06□□□□□ -1.12
RNU4-28P-201ENST00000364739 DCDC2CA8MYV0 355 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 WDR64B1ANS9 1081 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 TGFB1P01137 390 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 HCLS1P14317 486 aaPredicted RBP8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 TTLL4Q14679 1199 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 LLGL2Q6P1M3 1020 aa8.05□□□□□ -1.12
RNU4-28P-201ENST00000364739 PAOXQ6QHF9 649 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms