RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 DMRTB1Q96MA1 342 aa3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 TCF12Q99081 682 aa3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 NRSN2Q9GZP1 204 aa3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 GSX1Q9H4S2 264 aaPredicted RBP3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ZNF576Q9H609 170 aa3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 PAK6Q9NQU5 681 aaPredicted RBP3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 LATS2Q9NRM7 1088 aa3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 KRT82Q9NSB4 513 aa3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 CCDC87Q9NVE4 849 aa3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ZC3H7BQ9UGR2 993 aaKnown RBP3.69□□□□□ -1.82
RNU6-1048P-201ENST00000364054 METTL12A8MUP2 240 aa3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 H3BRB1 525 aa3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 GADD45BO75293 160 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 POLR3DP05423 398 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 GRIA4P48058 902 aa3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ID3Q02535 119 aa3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ZNF211Q13398 564 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ZNF648Q5T619 568 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 PRPF40BQ6NWY9 871 aaKnown RBP3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ATG4DQ86TL0 474 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 TUT1Q9H6E5 874 aaKnown RBP3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 FAM105AQ9NUU6 356 aa3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 NLRP2Q9NX02 1062 aa3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 VAV3Q9UKW4 847 aa3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 SAMM50Q9Y512 469 aa3.68□□□□□ -1.82
RNU6-1048P-201ENST00000364054 TMEM265A0A087WTH1 108 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ARID3CA6NKF2 412 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 IFI16Q16666 785 aaKnown RBP3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 SPRED3Q2MJR0 410 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 DTHD1Q6ZMT9 781 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 KSR1Q8IVT5 923 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 SMYD4Q8IYR2 804 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 CCER1Q8TC90 406 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 BCL7CQ8WUZ0 217 aaPredicted RBP3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 GATA6Q92908 595 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 SLC38A3Q99624 504 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 EMILIN2Q9BXX0 1053 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 RC3H2Q9HBD1 1191 aaKnown RBP3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 FAM53CQ9NYF3 392 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 PCOLCE2Q9UKZ9 415 aa3.67□□□□□ -1.82
RNU6-1048P-201ENST00000364054 TMEM238LA0A1B0GVL6 79 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 FARP2O94887 1054 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 PRKCQQ04759 706 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ZNF124Q15973 351 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ZNF792Q3KQV3 632 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ANGEL2Q5VTE6 544 aaKnown RBP3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 SEZ6L2Q6UXD5 910 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ZNF574Q6ZN55 896 aaPredicted RBP3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 PI4K2BQ8TCG2 481 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 CCDC74AQ96AQ1 378 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 HRASLS5Q96KN8 279 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 FAM129BQ96TA1 746 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 TRIM56Q9BRZ2 755 aaKnown RBP3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 WDR18Q9BV38 432 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 SSU72Q9NP77 194 aaKnown RBP3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 NPHS2Q9NP85 383 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 ANO2Q9NQ90 1003 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 C1GALT1Q9NS00 363 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 TMEM39AQ9NV64 488 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 CRIM1Q9NZV1 1036 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 GTF2IRD1Q9UHL9 959 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 SNX11Q9Y5W9 270 aa3.66□□□□□ -1.82
RNU6-1048P-201ENST00000364054 RNGTTO60942 597 aaKnown RBP3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 GSTP1P09211 210 aaKnown RBP3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 FAM87AP0C7U9 286 aa3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 FUT4P22083 530 aa3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 KIF4BQ2VIQ3 1234 aa3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 PHLDB3Q6NSJ2 640 aa3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 ERICH6Q7L0X2 663 aa3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 FAM181AQ8N9Y4 354 aa3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 KCT2Q8NC54 265 aa3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 TMEM40Q8WWA1 233 aa3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 ALKBH8Q96BT7 664 aaKnown RBP3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 GPN3Q9UHW5 284 aaPredicted RBP3.65□□□□□ -1.83
RNU6-1048P-201ENST00000364054 EIF1AYO14602 144 aaKnown RBP3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 TMPRSS2O15393 492 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 DYNC1LI2O43237 492 aaPredicted RBP3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 PAPLNO95428 1278 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 BNIP3Q12983 259 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 CDK5R2Q13319 367 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 SCARA3Q6AZY7 606 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 NFXL1Q6ZNB6 911 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 BHLHE22Q8NFJ8 381 aaPredicted RBP3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 ASB11Q8WXH4 323 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 FAM168AQ92567 244 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 KCNB2Q92953 911 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 CCDC120Q96HB5 630 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 FANCD2OSQ96PS1 177 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 CSRNP1Q96S65 589 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 CEP44Q9C0F1 390 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 ABCB6Q9NP58 842 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 PICK1Q9NRD5 415 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 PPP1R9AQ9ULJ8 1098 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 GTF3C3Q9Y5Q9 886 aa3.64□□□□□ -1.83
RNU6-1048P-201ENST00000364054 DBX1A6NMT0 343 aa3.63□□□□□ -1.83
RNU6-1048P-201ENST00000364054 CEACAM5P06731 702 aa3.63□□□□□ -1.83
RNU6-1048P-201ENST00000364054 CTSBP07858 339 aa3.63□□□□□ -1.83
RNU6-1048P-201ENST00000364054 LIG1P18858 919 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms