RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 SDF4Q9BRK5 362 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 SLC26A6Q9BXS9 759 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 MCM9Q9NXL9 1143 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 FBXO3Q9UK99 471 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 CLEC4GQ6UXB4 293 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 CCDC73Q6ZRK6 1079 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 PARP3Q9Y6F1 533 aa10.63□□□□□ -0.71
CALD1-202ENST00000361901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
CALD1-202ENST00000361901 SPATA31A6Q5VVP1 1343 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 TSPY2A6NKD2 308 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 GADD45BO75293 160 aaPredicted RBP10.62□□□□□ -0.71
CALD1-202ENST00000361901 DYNLL1P63167 89 aaKnown RBP10.62□□□□□ -0.71
CALD1-202ENST00000361901 NFIXQ14938 502 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 ZSCAN23Q3MJ62 389 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 TRIM22Q8IYM9 498 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 C17orf53Q8N3J3 647 aaPredicted RBP10.62□□□□□ -0.71
CALD1-202ENST00000361901 DSCC1Q9BVC3 393 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 ZC3H12CQ9C0D7 883 aaKnown RBP10.62□□□□□ -0.71
CALD1-202ENST00000361901 ANKRD2Q9GZV1 360 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 RBSNQ9H1K0 784 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 TTC12Q9H892 705 aaPredicted RBP10.62□□□□□ -0.71
CALD1-202ENST00000361901 MINPP1Q9UNW1 487 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 NTSR2O95665 410 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 CALRP27797 417 aaKnown RBP10.62□□□□□ -0.71
CALD1-202ENST00000361901 CDC37L1Q7L3B6 337 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 CKAP2LQ8IYA6 745 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 CMTR1Q8N1G2 835 aaKnown RBP10.62□□□□□ -0.71
CALD1-202ENST00000361901 CCDC112Q8NEF3 446 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 TM6SF1Q9BZW5 370 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 SAP30BPQ9UHR5 308 aaKnown RBP10.62□□□□□ -0.71
CALD1-202ENST00000361901 CREBRFQ8IUR6 639 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 SPC24Q8NBT2 197 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 TSPY26PQ9H489 355 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 DENND2AQ9ULE3 1009 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 STX8Q9UNK0 236 aa10.62□□□□□ -0.71
CALD1-202ENST00000361901 CYP2D7A0A087X1C5 515 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 ZBTB43O43298 467 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 LDHBP07195 334 aaKnown RBP10.61□□□□□ -0.71
CALD1-202ENST00000361901 WTAPQ15007 396 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 TNS2Q63HR2 1409 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 hCG_1642624A0A1W2PR95 340 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 RXRBP28702 533 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 ADD2P35612 726 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 IQCA1Q86XH1 822 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 PHKBQ93100 1093 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 CRNKL1Q9BZJ0 848 aaKnown RBP10.61□□□□□ -0.71
CALD1-202ENST00000361901 ZNF804BA4D1E1 1349 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 USP42Q9H9J4 1324 aaKnown RBP10.61□□□□□ -0.71
CALD1-202ENST00000361901 IARSP41252 1262 aaKnown RBP10.61□□□□□ -0.71
CALD1-202ENST00000361901 TXNRD1Q16881 649 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 IFNL3Q8IZI9 196 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 LCORLQ8N3X6 602 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 ZNF609O15014 1411 aa10.61□□□□□ -0.71
CALD1-202ENST00000361901 TRPM3Q9HCF6 1732 aaPredicted RBP10.61□□□□□ -0.71
CALD1-202ENST00000361901 COL9A3Q14050 684 aaPredicted RBP10.6□□□□□ -0.71
CALD1-202ENST00000361901 ZNF804AQ7Z570 1209 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 DRC1Q96MC2 740 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 ROBO1Q9Y6N7 1651 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 BRD1O95696 1058 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 DOK7Q18PE1 504 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 PLA2G12BQ9BX93 195 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
CALD1-202ENST00000361901 GGA1Q9UJY5 639 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 MPHOSPH10O00566 681 aaKnown RBP10.6□□□□□ -0.71
CALD1-202ENST00000361901 ADD1P35611 737 aaKnown RBP10.6□□□□□ -0.71
CALD1-202ENST00000361901 GIMAP6Q6P9H5 292 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 CTR9Q6PD62 1173 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 ZNF444Q8N0Y2 327 aaPredicted RBP10.6□□□□□ -0.71
CALD1-202ENST00000361901 RBM17Q96I25 401 aaKnown RBP10.6□□□□□ -0.71
CALD1-202ENST00000361901 USP17L12C9JPN9 530 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 USP17L21D6R901 530 aa10.6□□□□□ -0.71
CALD1-202ENST00000361901 POLR3GO15318 223 aaPredicted RBP10.6□□□□□ -0.71
CALD1-202ENST00000361901 ZNF396Q96N95 335 aaPredicted RBP10.6□□□□□ -0.71
CALD1-202ENST00000361901 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
CALD1-202ENST00000361901 STOX1Q6ZVD7 989 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 TNMDQ9H2S6 317 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 VAT1LQ9HCJ6 419 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 ALS2Q96Q42 1657 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 BECN2A8MW95 431 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 BAG3O95817 575 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 KLRK1P26718 216 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 PRDX5P30044 214 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 GTF2IP78347 998 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 SCRN1Q12765 414 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 IKQ13123 557 aaPredicted RBP10.59□□□□□ -0.71
CALD1-202ENST00000361901 UBE4AQ14139 1066 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 DIXDC1Q155Q3 683 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 FNBP4Q8N3X1 1017 aaPredicted RBP10.59□□□□□ -0.71
CALD1-202ENST00000361901 ALG1Q9BT22 464 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 LMBRD1Q9NUN5 540 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 BSDC1Q9NW68 430 aaPredicted RBP10.59□□□□□ -0.71
CALD1-202ENST00000361901 CFAP45Q9UL16 551 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
CALD1-202ENST00000361901 CDKL5O76039 1030 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 FAM47AQ5JRC9 791 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
CALD1-202ENST00000361901 ESR2Q92731 530 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 USP25Q9UHP3 1055 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 LMO7Q8WWI1 1683 aa10.59□□□□□ -0.71
CALD1-202ENST00000361901 STRCQ7RTU9 1775 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms