RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 GJB4Q9NTQ9 266 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 SH3TC1Q8TE82 1336 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 JCADQ9P266 1359 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.73
TOP1-201ENST00000361337 RXRBP28702 533 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 LMAN1P49257 510 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 TSGA10IPQ3SY00 556 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 ISM2Q6H9L7 571 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 SYT10Q6XYQ8 523 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 FAM53CQ9NYF3 392 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 RCOR1Q9UKL0 485 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 PXDNQ92626 1479 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 A0A1B0GUL7 405 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 FANCGO15287 622 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 TMEM51Q9NW97 253 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 CFAP45Q9UL16 551 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 H0YHG0 523 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 NOM1Q5C9Z4 860 aaKnown RBP10.51□□□□□ -0.73
TOP1-201ENST00000361337 TPTE2Q6XPS3 522 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 MIGA1Q8NAN2 632 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 SMARCC2Q8TAQ2 1214 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 HMG20BQ9P0W2 317 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 SPATA31A1Q5TZJ5 1347 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 PALLDQ8WX93 1383 aa10.51□□□□□ -0.73
TOP1-201ENST00000361337 GOLGA8FQ08AF8 430 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 GOLGA8DPQ0D2H9 430 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 PDIA6Q15084 440 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 NFXL1Q6ZNB6 911 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 ERO1AQ96HE7 468 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 PPP1R13BQ96KQ4 1090 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 XPO4Q9C0E2 1151 aaKnown RBP10.5□□□□□ -0.73
TOP1-201ENST00000361337 ZSWIM4Q9H7M6 989 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 ARGLU1Q9NWB6 273 aaPredicted RBP10.5□□□□□ -0.73
TOP1-201ENST00000361337 KINO60870 393 aaKnown RBP10.5□□□□□ -0.73
TOP1-201ENST00000361337 SLU7O95391 586 aaKnown RBP10.5□□□□□ -0.73
TOP1-201ENST00000361337 NDUFA8P51970 172 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 LEKR1Q6ZMV7 388 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 ANKRD18AQ8IVF6 992 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 CCDC191Q8NCU4 936 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 GPR101Q96P66 508 aaPredicted RBP10.5□□□□□ -0.73
TOP1-201ENST00000361337 EPC1Q9H2F5 836 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 CWC15Q9P013 229 aaKnown RBP10.5□□□□□ -0.73
TOP1-201ENST00000361337 PCDHA7Q9UN72 937 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 LAMB2P55268 1798 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 ATP2B1P20020 1258 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 ITPK1Q13572 414 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 CCDC152Q4G0S7 254 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 CCDC73Q6ZRK6 1079 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 TMC6Q7Z403 805 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 ZSCAN16Q9H4T2 348 aaPredicted RBP10.5□□□□□ -0.73
TOP1-201ENST00000361337 IFNKQ9P0W0 207 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 NEDD4P46934 1319 aa10.5□□□□□ -0.73
TOP1-201ENST00000361337 SMC2O95347 1197 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 ATP2B2Q01814 1243 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 FAM160A1Q05DH4 1040 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 SUSD4Q5VX71 490 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 RALYLQ86SE5 291 aaKnown RBP10.49□□□□□ -0.73
TOP1-201ENST00000361337 NEK11Q8NG66 645 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 ROBO1Q9Y6N7 1651 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 PFKFB2O60825 505 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 POLR3DP05423 398 aaPredicted RBP10.49□□□□□ -0.73
TOP1-201ENST00000361337 ADORA1P30542 326 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 CLCN6P51797 869 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 TRDNQ13061 729 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 GIGYF2Q6Y7W6 1299 aaKnown RBP10.49□□□□□ -0.73
TOP1-201ENST00000361337 ANO10Q9NW15 660 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 FHOD1Q9Y613 1164 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 CLIC4Q9Y696 253 aa10.49□□□□□ -0.73
TOP1-201ENST00000361337 EYA2O00167 538 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 EN1Q05925 392 aaPredicted RBP10.48□□□□□ -0.73
TOP1-201ENST00000361337 TNNI3KQ59H18 835 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 CEP57L1Q8IYX8 460 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 FMR1NBQ8N0W7 255 aaPredicted RBP10.48□□□□□ -0.73
TOP1-201ENST00000361337 CNBD1Q8NA66 436 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 SDF4Q9BRK5 362 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 CENPHQ9H3R5 247 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 FPGT-TNNI3KV9GXZ4 949 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 CYP19A1P11511 503 aaPredicted RBP10.48□□□□□ -0.73
TOP1-201ENST00000361337 ATP1A3P13637 1013 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 FDPSP14324 419 aaKnown RBP10.48□□□□□ -0.73
TOP1-201ENST00000361337 IRX5P78411 483 aaPredicted RBP10.48□□□□□ -0.73
TOP1-201ENST00000361337 AIDAQ96BJ3 306 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 CCDC34Q96HJ3 373 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 NEMFO60524 1076 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 CAVIN2O95810 425 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 H2AFXP16104 143 aaPredicted RBP10.48□□□□□ -0.73
TOP1-201ENST00000361337 TDO2P48775 406 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 DEFB132Q7Z7B7 95 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 CDC5LQ99459 802 aaKnown RBP10.48□□□□□ -0.73
TOP1-201ENST00000361337 UTYO14607 1347 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 MAP3K15Q6ZN16 1313 aa10.48□□□□□ -0.73
TOP1-201ENST00000361337 IL15P40933 162 aaPredicted RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 SETQ01105 290 aaPredicted RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 PTPN12Q05209 780 aaKnown RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 KRT32Q14532 448 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 ERFEQ4G0M1 354 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 SLC9C2Q5TAH2 1124 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 NLRP10Q86W26 655 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 NOC3LQ8WTT2 800 aaKnown RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 ANKRD65E5RJM6 399 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms