RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 HDXQ7Z353 690 aa13.67□□□□□ -0.22
EPHB4-202ENST00000360620 IGSF22Q8N9C0 903 aa13.67□□□□□ -0.22
EPHB4-202ENST00000360620 KIAA0754O94854 1291 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 MCM3P25205 808 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 TTF1Q15361 905 aaPredicted RBP13.66□□□□□ -0.22
EPHB4-202ENST00000360620 CTAGE1Q96RT6 745 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 GPAA1O43292 621 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 ST7Q9NRC1 585 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 CUTAO60888 179 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 ADD1P35611 737 aaKnown RBP13.66□□□□□ -0.22
EPHB4-202ENST00000360620 WTAPQ15007 396 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 SLFNL1Q499Z3 407 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 APPBP2Q92624 585 aa13.66□□□□□ -0.22
EPHB4-202ENST00000360620 USP42Q9H9J4 1324 aaKnown RBP13.65□□□□□ -0.22
EPHB4-202ENST00000360620 CCZ1BP86790 482 aa13.65□□□□□ -0.22
EPHB4-202ENST00000360620 CCZ1P86791 482 aaPredicted RBP13.65□□□□□ -0.22
EPHB4-202ENST00000360620 PIP4K2BP78356 416 aa13.65□□□□□ -0.22
EPHB4-202ENST00000360620 ZNF827Q17R98 1081 aa13.65□□□□□ -0.22
EPHB4-202ENST00000360620 CLIC6Q96NY7 704 aa13.65□□□□□ -0.22
EPHB4-202ENST00000360620 OSBPL5Q9H0X9 879 aaPredicted RBP13.65□□□□□ -0.22
EPHB4-202ENST00000360620 POLR3EQ9NVU0 708 aa13.65□□□□□ -0.22
EPHB4-202ENST00000360620 PCDHA5Q9Y5H7 936 aa13.65□□□□□ -0.22
EPHB4-202ENST00000360620 RRAGBQ5VZM2 374 aa13.65□□□□□ -0.23
EPHB4-202ENST00000360620 DHX40Q8IX18 779 aaKnown RBP13.65□□□□□ -0.23
EPHB4-202ENST00000360620 MLKLQ8NB16 471 aa13.65□□□□□ -0.23
EPHB4-202ENST00000360620 PRDM11Q9NQV5 511 aa13.65□□□□□ -0.23
EPHB4-202ENST00000360620 GPHNQ9NQX3 736 aaPredicted RBP13.65□□□□□ -0.23
EPHB4-202ENST00000360620 GUCA1BQ9UMX6 200 aa13.65□□□□□ -0.23
EPHB4-202ENST00000360620 ANKRD18BA2A2Z9 1011 aa13.64□□□□□ -0.23
EPHB4-202ENST00000360620 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
EPHB4-202ENST00000360620 RANBP6O60518 1105 aaKnown RBP13.64□□□□□ -0.23
EPHB4-202ENST00000360620 DIS3L2Q8IYB7 885 aaKnown RBP13.64□□□□□ -0.23
EPHB4-202ENST00000360620 CCT6AP40227 531 aaKnown RBP13.64□□□□□ -0.23
EPHB4-202ENST00000360620 POSTNQ15063 836 aa13.64□□□□□ -0.23
EPHB4-202ENST00000360620 PLBD2Q8NHP8 589 aa13.64□□□□□ -0.23
EPHB4-202ENST00000360620 GJB4Q9NTQ9 266 aa13.64□□□□□ -0.23
EPHB4-202ENST00000360620 PHLPP2Q6ZVD8 1323 aa13.64□□□□□ -0.23
EPHB4-202ENST00000360620 SHTN1A0MZ66 631 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 IKBKBO14920 756 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 HNRNPH2P55795 449 aaKnown RBP13.63□□□□□ -0.23
EPHB4-202ENST00000360620 SPA17Q15506 151 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 EPHA10Q5JZY3 1008 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 CNGA4Q8IV77 575 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 RNF41Q9H4P4 317 aaPredicted RBP13.63□□□□□ -0.23
EPHB4-202ENST00000360620 JADE2Q9NQC1 790 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 FGAP02671 866 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 PTPN12Q05209 780 aaKnown RBP13.63□□□□□ -0.23
EPHB4-202ENST00000360620 FMR1NBQ8N0W7 255 aaPredicted RBP13.63□□□□□ -0.23
EPHB4-202ENST00000360620 CENPHQ9H3R5 247 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 SLC52A2Q9HAB3 445 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 DIP2BQ9P265 1576 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 SPAG1Q07617 926 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 ST3GAL1Q11201 340 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 ZMYM1Q5SVZ6 1142 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 E4F1Q66K89 784 aaPredicted RBP13.63□□□□□ -0.23
EPHB4-202ENST00000360620 XAGE2Q96GT9 111 aa13.63□□□□□ -0.23
EPHB4-202ENST00000360620 SLC39A14Q15043 492 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 RILPL1Q5EBL4 403 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 TRMT112Q9UI30 125 aaKnown RBP13.62□□□□□ -0.23
EPHB4-202ENST00000360620 MAST3O60307 1309 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 DLC1Q96QB1 1528 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 CHGBP05060 677 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 NBPF11Q86T75 865 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 ZKSCAN3Q9BRR0 538 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 TMEM131LA2VDJ0 1609 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 ZBTB22O15209 634 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 MATR3P43243 847 aaKnown RBP eCLIP13.62□□□□□ -0.23
EPHB4-202ENST00000360620 ZAP70P43403 619 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 TUBB4BP68371 445 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 AMOTL1Q8IY63 956 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 CAPZA3Q96KX2 299 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 CABP5Q9NP86 173 aa13.62□□□□□ -0.23
EPHB4-202ENST00000360620 RDXP35241 583 aaKnown RBP13.61□□□□□ -0.23
EPHB4-202ENST00000360620 USP8P40818 1118 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 TSGA10IPQ3SY00 556 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 ARMCX5Q6P1M9 558 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 IQCA1Q86XH1 822 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
EPHB4-202ENST00000360620 SMARCC2Q8TAQ2 1214 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 KRT23Q9C075 422 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 ALDH8A1Q9H2A2 487 aaPredicted RBP13.61□□□□□ -0.23
EPHB4-202ENST00000360620 PREX1Q8TCU6 1659 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 STX10O60499 249 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 NLRP5P59047 1200 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 NYAP1Q6ZVC0 841 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 RABGGTAQ92696 567 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 NAPGQ99747 312 aaPredicted RBP13.61□□□□□ -0.23
EPHB4-202ENST00000360620 TANGO6Q9C0B7 1094 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 SERTAD1Q9UHV2 236 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 SLFN14P0C7P3 912 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 TRIM21P19474 475 aaKnown RBP13.61□□□□□ -0.23
EPHB4-202ENST00000360620 DNA2P51530 1060 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 KIF23Q02241 960 aaPredicted RBP13.61□□□□□ -0.23
EPHB4-202ENST00000360620 BRD3Q15059 726 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 LRRC24Q50LG9 513 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 DCAF5Q96JK2 942 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 CNNM2Q9H8M5 875 aa13.61□□□□□ -0.23
EPHB4-202ENST00000360620 KCNJ14Q9UNX9 436 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms