RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TTC21BQ7Z4L5 1316 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 GNA11P29992 359 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 KIFC2Q96AC6 838 aa14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 DKC1O60832 514 aaKnown RBP eCLIP14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 TRMT112Q9UI30 125 aaKnown RBP14.74□□□□□ -0.05
SRGAP3-201ENST00000360413 LIG3P49916 1009 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 HOOK2Q96ED9 719 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 NOX5Q96PH1 765 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 CASKIN1Q8WXD9 1431 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 C6orf229H3BNL8 230 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 C17orf53Q8N3J3 647 aaPredicted RBP14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 PPANQ9NQ55 473 aaKnown RBP14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 ZC4H2Q9NQZ6 224 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 SMTNP53814 917 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 PHLDB3Q6NSJ2 640 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 TRMT1LQ7Z2T5 733 aaKnown RBP14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 ZNF622Q969S3 477 aaKnown RBP eCLIP14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 LRRC23Q53EV4 343 aaPredicted RBP14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 IFIT1BQ5T764 474 aaKnown RBP14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 GOLGA5Q8TBA6 731 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 DACT3Q96B18 629 aaPredicted RBP14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 BCL2L12Q9HB09 334 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 SPECC1L-ADORA2AF8WAN1 911 aa14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 SPATS2Q86XZ4 545 aaKnown RBP14.73□□□□□ -0.05
SRGAP3-201ENST00000360413 SESN3P58005 492 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 IGHDP01880 384 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 SLC12A5Q9H2X9 1139 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 RPSAP08865 295 aaKnown RBP14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 ASIC1P78348 528 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 ITIH3Q06033 890 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 ALG1Q9BT22 464 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 CCT6AP40227 531 aaKnown RBP14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 RAD54L2Q9Y4B4 1467 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 I3L4J1 428 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 CCDC65Q8IXS2 484 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 SMARCC2Q8TAQ2 1214 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 MRRFQ96E11 262 aaKnown RBP14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 RBSNQ9H1K0 784 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 TRIM27P14373 513 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 MCM7P33993 719 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 WTAPQ15007 396 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 WDR44Q5JSH3 913 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 HACE1Q8IYU2 909 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 ITSN2Q9NZM3 1697 aa14.72□□□□□ -0.05
SRGAP3-201ENST00000360413 PFDN6O15212 129 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 PLCB4Q15147 1175 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 Q9H521 79 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 SPTLC2O15270 562 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 TSHZ3Q63HK5 1081 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 LCA5Q86VQ0 697 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 DHX58Q96C10 678 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 FAN1Q9Y2M0 1017 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 STX17P56962 302 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 MCM10Q7L590 875 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 UBL4BQ8N7F7 174 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 ABTB1Q969K4 478 aaPredicted RBP14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 HAND2P61296 217 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 MIS18AQ9NYP9 233 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 LARSQ9P2J5 1176 aaKnown RBP14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 TTF2Q9UNY4 1162 aaKnown RBP14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 MYO10Q9HD67 2058 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 DNAJC8O75937 253 aaPredicted RBP14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 RNASE9P60153 205 aaKnown RBP14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 PPP2R5AQ15172 486 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 PSPC1Q8WXF1 523 aaKnown RBP14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 CCDC61Q9Y6R9 512 aa14.71□□□□□ -0.05
SRGAP3-201ENST00000360413 CLTAP09496 248 aa14.71□□□□□ -0.06
SRGAP3-201ENST00000360413 IRX5P78411 483 aaPredicted RBP14.71□□□□□ -0.06
SRGAP3-201ENST00000360413 NYXQ9GZU5 481 aa14.71□□□□□ -0.06
SRGAP3-201ENST00000360413 CYP26C1Q6V0L0 522 aa14.71□□□□□ -0.06
SRGAP3-201ENST00000360413 PPP1R9AQ9ULJ8 1098 aa14.71□□□□□ -0.06
SRGAP3-201ENST00000360413 NSD2O96028 1365 aa14.71□□□□□ -0.06
SRGAP3-201ENST00000360413 KIAA1107Q9UPP5 1409 aa14.71□□□□□ -0.06
SRGAP3-201ENST00000360413 NUCB1Q02818 461 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 ZNF804AQ7Z570 1209 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 TNNI2P48788 182 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 HHATQ5VTY9 493 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 TRIM35Q9UPQ4 493 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 AGTPBP1Q9UPW5 1226 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 VPS41P49754 854 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 GOLGA8QA0A0J9YX86 632 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 GOLGA8OA6NCC3 632 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 GOLGA8CPA6NN73 597 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 GOLGA8NF8WBI6 632 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 NAA16Q6N069 864 aaPredicted RBP14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 WDR46O15213 610 aaKnown RBP14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 MX2P20592 715 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 LPXNO60711 386 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 FAM8A1Q9UBU6 413 aa14.7□□□□□ -0.06
SRGAP3-201ENST00000360413 TMED1Q13445 227 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 VAT1LQ9HCJ6 419 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 RFC4P35249 363 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 DENND2CQ68D51 928 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 THEGQ9P2T0 379 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 STX8Q9UNK0 236 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 MRFAP1Q9Y605 127 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 PAK2Q13177 524 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 ANKRD20A3Q5VUR7 823 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 ATL3Q6DD88 541 aa14.69□□□□□ -0.06
SRGAP3-201ENST00000360413 FAM204AQ9H8W3 233 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms