RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 PPP2R2CQ9Y2T4 447 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 NWD2Q9ULI1 1742 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 EFCAB8A8MWE9 144 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 TBC1D8O95759 1140 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 TOP1P11387 765 aaKnown RBP12.55□□□□□ -0.4
RPE-202ENST00000359429 LRRFIP1Q32MZ4 808 aaKnown RBP12.55□□□□□ -0.4
RPE-202ENST00000359429 PHKBQ93100 1093 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 CHMP4CQ96CF2 233 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 TRERF1Q96PN7 1200 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 MAP3K14Q99558 947 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 UBXN6Q9BZV1 441 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 PCDHA5Q9Y5H7 936 aa12.55□□□□□ -0.4
RPE-202ENST00000359429 MEGF6O75095 1541 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 CAMTA1Q9Y6Y1 1673 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 CAPN2P17655 700 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 ST5P78524 1137 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 NEK11Q8NG66 645 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 NCOA7Q8NI08 942 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 ALG1Q9BT22 464 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 CCP110O43303 1012 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 FAM193AP78312 1265 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 KRT40Q6A162 431 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 TOGARAM2Q6ZUX3 1019 aa12.54□□□□□ -0.4
RPE-202ENST00000359429 ARGLU1Q9NWB6 273 aaPredicted RBP12.54□□□□□ -0.4
RPE-202ENST00000359429 AFDNP55196 1824 aaKnown RBP12.54□□□□□ -0.4
RPE-202ENST00000359429 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
RPE-202ENST00000359429 ZAP70P43403 619 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 ADKP55263 362 aaKnown RBP12.53□□□□□ -0.4
RPE-202ENST00000359429 DHX8Q14562 1220 aaKnown RBP12.53□□□□□ -0.4
RPE-202ENST00000359429 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
RPE-202ENST00000359429 CALCOCO1Q9P1Z2 691 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 PPP6R2O75170 966 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 GNG11P61952 73 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 MAP3K9P80192 1104 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
RPE-202ENST00000359429 CCDC158Q5M9N0 1113 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 RESP18Q5W5W9 173 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 CC2D1AQ6P1N0 951 aaPredicted RBP12.53□□□□□ -0.4
RPE-202ENST00000359429 CYB5R4Q7L1T6 521 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 RALYLQ86SE5 291 aaKnown RBP12.53□□□□□ -0.4
RPE-202ENST00000359429 CREBRFQ8IUR6 639 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 XAGE2Q96GT9 111 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 CCDC85AQ96PX6 553 aaPredicted RBP12.53□□□□□ -0.4
RPE-202ENST00000359429 SRRTQ9BXP5 876 aaKnown RBP12.53□□□□□ -0.4
RPE-202ENST00000359429 ZBTB3Q9H5J0 574 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 ARFGEF2Q9Y6D5 1785 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 TMEM94Q12767 1356 aa12.53□□□□□ -0.4
RPE-202ENST00000359429 FAM237AA0A1B0GTK4 181 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 TULP2O00295 520 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 ZNF213O14771 459 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 ARHGAP6O43182 974 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 FMR1Q06787 632 aaKnown RBP eCLIP12.52□□□□□ -0.4
RPE-202ENST00000359429 TICAM2Q86XR7 235 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 TC2NQ8N9U0 490 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 SMARCE1Q969G3 411 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 KIFC2Q96AC6 838 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 CCDC34Q96HJ3 373 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 C19orf44Q9H6X5 657 aa12.52□□□□□ -0.4
RPE-202ENST00000359429 GPAA1O43292 621 aa12.52□□□□□ -0.41
RPE-202ENST00000359429 GRIN1Q05586 938 aa12.52□□□□□ -0.41
RPE-202ENST00000359429 TTC39AQ5SRH9 613 aa12.52□□□□□ -0.41
RPE-202ENST00000359429 KRBA2Q6ZNG9 492 aa12.52□□□□□ -0.41
RPE-202ENST00000359429 KRT28Q7Z3Y7 464 aa12.52□□□□□ -0.41
RPE-202ENST00000359429 TBC1D10CQ8IV04 446 aa12.52□□□□□ -0.41
RPE-202ENST00000359429 PDILTQ8N807 584 aa12.52□□□□□ -0.41
RPE-202ENST00000359429 MED15Q96RN5 788 aa12.52□□□□□ -0.41
RPE-202ENST00000359429 BAG1Q99933 345 aaPredicted RBP12.52□□□□□ -0.41
RPE-202ENST00000359429 DESI2Q9BSY9 194 aa12.52□□□□□ -0.41
RPE-202ENST00000359429 IRX2Q9BZI1 471 aaPredicted RBP12.52□□□□□ -0.41
RPE-202ENST00000359429 ZNF142P52746 1687 aaPredicted RBP12.51□□□□□ -0.41
RPE-202ENST00000359429 ZSCAN12O43309 604 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 A1BGP04217 495 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 OAS2P29728 719 aaKnown RBP12.51□□□□□ -0.41
RPE-202ENST00000359429 GYS2P54840 703 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
RPE-202ENST00000359429 ZNF827Q17R98 1081 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 TEX35Q5T0J7 233 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 RSRC2Q7L4I2 434 aaKnown RBP12.51□□□□□ -0.41
RPE-202ENST00000359429 FCHSD1Q86WN1 690 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 CNNM3Q8NE01 707 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPE-202ENST00000359429 APPBP2Q92624 585 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 MYL10Q9BUA6 226 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 CEP126Q9P2H0 1117 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 MRFAP1Q9Y605 127 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 CPDO75976 1380 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 RANBP6O60518 1105 aaKnown RBP12.51□□□□□ -0.41
RPE-202ENST00000359429 CASQ1P31415 396 aa12.51□□□□□ -0.41
RPE-202ENST00000359429 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
RPE-202ENST00000359429 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms