RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 PPFIA3O75145 1194 aa30.55■■■□□ 2.48
C1orf228-201ENST00000357508 CAVIN4Q5BKX8 364 aa30.55■■■□□ 2.48
C1orf228-201ENST00000357508 SH2B2O14492 632 aaPredicted RBP30.55■■■□□ 2.48
C1orf228-201ENST00000357508 PRKAB2O43741 272 aa30.55■■■□□ 2.48
C1orf228-201ENST00000357508 CCDC24Q8N4L8 307 aa30.54■■■□□ 2.48
C1orf228-201ENST00000357508 FAM84BQ96KN1 310 aaPredicted RBP30.54■■■□□ 2.48
C1orf228-201ENST00000357508 KLHL34Q8N239 644 aa30.53■■■□□ 2.48
C1orf228-201ENST00000357508 RNF214Q8ND24 703 aa30.53■■■□□ 2.48
C1orf228-201ENST00000357508 COL23A1Q86Y22 540 aaPredicted RBP30.53■■■□□ 2.48
C1orf228-201ENST00000357508 RRAGDQ9NQL2 400 aaPredicted RBP30.53■■■□□ 2.48
C1orf228-201ENST00000357508 ABCF2Q9UG63 623 aa30.53■■■□□ 2.48
C1orf228-201ENST00000357508 SLC4A4Q9Y6R1 1079 aa30.53■■■□□ 2.48
C1orf228-201ENST00000357508 CYP7A1P22680 504 aa30.52■■■□□ 2.48
C1orf228-201ENST00000357508 ADD1P35611 737 aaKnown RBP30.52■■■□□ 2.48
C1orf228-201ENST00000357508 CTDSPL2Q05D32 466 aa30.52■■■□□ 2.48
C1orf228-201ENST00000357508 RAB11FIP4Q86YS3 637 aa30.52■■■□□ 2.48
C1orf228-201ENST00000357508 MIGA1Q8NAN2 632 aa30.52■■■□□ 2.48
C1orf228-201ENST00000357508 TRIM44Q96DX7 344 aaPredicted RBP30.52■■■□□ 2.48
C1orf228-201ENST00000357508 TMEM87BQ96K49 555 aa30.52■■■□□ 2.48
C1orf228-201ENST00000357508 ADGRA1Q86SQ6 560 aa30.52■■■□□ 2.48
C1orf228-201ENST00000357508 CFAP45Q9UL16 551 aa30.52■■■□□ 2.48
C1orf228-201ENST00000357508 TACC3Q9Y6A5 838 aa30.52■■■□□ 2.48
C1orf228-201ENST00000357508 ECM29Q5VYK3 1845 aa30.51■■■□□ 2.48
C1orf228-201ENST00000357508 VPS37DQ86XT2 251 aa30.51■■■□□ 2.47
C1orf228-201ENST00000357508 NACAP1Q9BZK3 213 aa30.51■■■□□ 2.47
C1orf228-201ENST00000357508 INCENPQ9NQS7 918 aa30.51■■■□□ 2.47
C1orf228-201ENST00000357508 LIG1P18858 919 aa30.5■■■□□ 2.47
C1orf228-201ENST00000357508 FBXO33Q7Z6M2 555 aa30.5■■■□□ 2.47
C1orf228-201ENST00000357508 RAI14Q9P0K7 980 aa30.5■■■□□ 2.47
C1orf228-201ENST00000357508 TM4SF1P30408 202 aa30.5■■■□□ 2.47
C1orf228-201ENST00000357508 TDO2P48775 406 aa30.5■■■□□ 2.47
C1orf228-201ENST00000357508 GUCY1B3Q02153 619 aa30.5■■■□□ 2.47
C1orf228-201ENST00000357508 IGDCC4Q8TDY8 1250 aa30.5■■■□□ 2.47
C1orf228-201ENST00000357508 PDLIM2Q96JY6 352 aa30.5■■■□□ 2.47
C1orf228-201ENST00000357508 AKNAD1Q5T1N1 836 aa30.49■■■□□ 2.47
C1orf228-201ENST00000357508 PGBD1Q96JS3 809 aa30.49■■■□□ 2.47
C1orf228-201ENST00000357508 CPLX1O14810 134 aa30.49■■■□□ 2.47
C1orf228-201ENST00000357508 KLRK1P26718 216 aa30.49■■■□□ 2.47
C1orf228-201ENST00000357508 GIMAP6Q6P9H5 292 aa30.49■■■□□ 2.47
C1orf228-201ENST00000357508 FUCA2Q9BTY2 467 aa30.49■■■□□ 2.47
C1orf228-201ENST00000357508 ANKRD2Q9GZV1 360 aa30.49■■■□□ 2.47
C1orf228-201ENST00000357508 CNNM2Q9H8M5 875 aa30.49■■■□□ 2.47
C1orf228-201ENST00000357508 GOLGA6L4A6NEF3 574 aa30.48■■■□□ 2.47
C1orf228-201ENST00000357508 SENP2Q9HC62 589 aa30.48■■■□□ 2.47
C1orf228-201ENST00000357508 ORC3Q9UBD5 711 aaPredicted RBP30.48■■■□□ 2.47
C1orf228-201ENST00000357508 SEMA3EO15041 775 aa30.47■■■□□ 2.47
C1orf228-201ENST00000357508 APOA5Q6Q788 366 aa30.47■■■□□ 2.47
C1orf228-201ENST00000357508 STAG1Q8WVM7 1258 aa30.47■■■□□ 2.47
C1orf228-201ENST00000357508 LY9Q9HBG7 655 aa30.47■■■□□ 2.47
C1orf228-201ENST00000357508 ANO8Q9HCE9 1232 aaPredicted RBP30.47■■■□□ 2.47
C1orf228-201ENST00000357508 NPHP1O15259 732 aa30.47■■■□□ 2.47
C1orf228-201ENST00000357508 KRT23Q9C075 422 aa30.47■■■□□ 2.47
C1orf228-201ENST00000357508 ZSWIM5Q9P217 1185 aa30.47■■■□□ 2.47
C1orf228-201ENST00000357508 BAZ2AQ9UIF9 1905 aaKnown RBP30.46■■■□□ 2.47
C1orf228-201ENST00000357508 KDM4AO75164 1064 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 SF3B2Q13435 895 aaKnown RBP30.46■■■□□ 2.47
C1orf228-201ENST00000357508 ATL3Q6DD88 541 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 MFSD6Q6ZSS7 791 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 DEFB132Q7Z7B7 95 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 SGMS1Q86VZ5 419 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 MAST2Q6P0Q8 1798 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 CCDC88AQ3V6T2 1871 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 MAGEB6P1A0A0J9YX57 407 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 METAP2P50579 478 aaKnown RBP eCLIP30.46■■■□□ 2.47
C1orf228-201ENST00000357508 CNBD1Q8NA66 436 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 FLAD1Q8NFF5 587 aa30.46■■■□□ 2.47
C1orf228-201ENST00000357508 TMEM67Q5HYA8 995 aa30.45■■■□□ 2.47
C1orf228-201ENST00000357508 C8orf76Q96K31 380 aa30.45■■■□□ 2.47
C1orf228-201ENST00000357508 RIOK1Q9BRS2 568 aaKnown RBP30.45■■■□□ 2.47
C1orf228-201ENST00000357508 PDS5AQ29RF7 1337 aaKnown RBP30.44■■■□□ 2.46
C1orf228-201ENST00000357508 DDR1Q08345 913 aa30.44■■■□□ 2.46
C1orf228-201ENST00000357508 PRR5LQ6MZQ0 368 aa30.44■■■□□ 2.46
C1orf228-201ENST00000357508 RCOR1Q9UKL0 485 aa30.44■■■□□ 2.46
C1orf228-201ENST00000357508 SERPINB2P05120 415 aa30.44■■■□□ 2.46
C1orf228-201ENST00000357508 LIFRP42702 1097 aa30.44■■■□□ 2.46
C1orf228-201ENST00000357508 ZNF396Q96N95 335 aaPredicted RBP30.44■■■□□ 2.46
C1orf228-201ENST00000357508 NUP62CLQ9H1M0 184 aa30.44■■■□□ 2.46
C1orf228-201ENST00000357508 BAG6P46379 1132 aa30.43■■■□□ 2.46
C1orf228-201ENST00000357508 FBXO18Q8NFZ0 1043 aa30.43■■■□□ 2.46
C1orf228-201ENST00000357508 ZNF384Q8TF68 577 aa30.43■■■□□ 2.46
C1orf228-201ENST00000357508 USP28Q96RU2 1077 aa30.43■■■□□ 2.46
C1orf228-201ENST00000357508 FTOQ9C0B1 505 aaKnown RBP eCLIP30.43■■■□□ 2.46
C1orf228-201ENST00000357508 DACT1Q9NYF0 836 aa30.43■■■□□ 2.46
C1orf228-201ENST00000357508 CEBPZQ03701 1054 aaKnown RBP30.43■■■□□ 2.46
C1orf228-201ENST00000357508 OTUD7BQ6GQQ9 843 aa30.43■■■□□ 2.46
C1orf228-201ENST00000357508 SDR42E1Q8WUS8 393 aa30.43■■■□□ 2.46
C1orf228-201ENST00000357508 HIBADHP31937 336 aaKnown RBP30.42■■■□□ 2.46
C1orf228-201ENST00000357508 SLC15A2Q16348 729 aa30.42■■■□□ 2.46
C1orf228-201ENST00000357508 ESPNB1AK53 854 aa30.41■■■□□ 2.46
C1orf228-201ENST00000357508 POLRMTO00411 1230 aaKnown RBP30.41■■■□□ 2.46
C1orf228-201ENST00000357508 IFIT3O14879 490 aaKnown RBP30.41■■■□□ 2.46
C1orf228-201ENST00000357508 ZBTB43O43298 467 aa30.41■■■□□ 2.46
C1orf228-201ENST00000357508 RXRAP19793 462 aa30.41■■■□□ 2.46
C1orf228-201ENST00000357508 CDC27P30260 824 aa30.41■■■□□ 2.46
C1orf228-201ENST00000357508 PPARAQ07869 468 aa30.41■■■□□ 2.46
C1orf228-201ENST00000357508 UVSSAQ2YD98 709 aa30.41■■■□□ 2.46
C1orf228-201ENST00000357508 NFXL1Q6ZNB6 911 aa30.41■■■□□ 2.46
C1orf228-201ENST00000357508 BICD2Q8TD16 824 aa30.41■■■□□ 2.46
C1orf228-201ENST00000357508 DDX19AQ9NUU7 478 aaKnown RBP30.41■■■□□ 2.46
C1orf228-201ENST00000357508 MICU3Q86XE3 530 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms