RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.02■□□□□ 0.47
RXRA-201ENST00000356384 EVCP57679 992 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 NEDD9Q14511 834 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 KSR2Q6VAB6 950 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 BRAPQ7Z569 592 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 NOC4LQ9BVI4 516 aaKnown RBP18.01■□□□□ 0.47
RXRA-201ENST00000356384 NSD2O96028 1365 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 ACEP12821 1306 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 ZNF174Q15697 407 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 U2AF2P26368 475 aaKnown RBP eCLIP18.01■□□□□ 0.47
RXRA-201ENST00000356384 ATP5DP30049 168 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 SV2BQ7L1I2 683 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 EPSTI1Q96J88 318 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 FNBP1Q96RU3 617 aa18.01■□□□□ 0.47
RXRA-201ENST00000356384 EPB41P11171 864 aaKnown RBP18■□□□□ 0.47
RXRA-201ENST00000356384 ATP11AP98196 1134 aa18■□□□□ 0.47
RXRA-201ENST00000356384 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
RXRA-201ENST00000356384 MIPOL1Q8TD10 442 aa18■□□□□ 0.47
RXRA-201ENST00000356384 SNX21Q969T3 373 aa18■□□□□ 0.47
RXRA-201ENST00000356384 ITSN2Q9NZM3 1697 aa18■□□□□ 0.47
RXRA-201ENST00000356384 UTP14CQ5TAP6 766 aaKnown RBP18■□□□□ 0.47
RXRA-201ENST00000356384 WDR66Q8TBY9 1149 aa18■□□□□ 0.47
RXRA-201ENST00000356384 CABLES1Q8TDN4 633 aa18■□□□□ 0.47
RXRA-201ENST00000356384 ZKSCAN3Q9BRR0 538 aa18■□□□□ 0.47
RXRA-201ENST00000356384 A0A1B0GVL5 298 aa18■□□□□ 0.47
RXRA-201ENST00000356384 STX10O60499 249 aa18■□□□□ 0.47
RXRA-201ENST00000356384 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18■□□□□ 0.473e-7■■■□□ 18.8
RXRA-201ENST00000356384 TNFAIP3P21580 790 aa18■□□□□ 0.47
RXRA-201ENST00000356384 MYL5Q02045 173 aa18■□□□□ 0.47
RXRA-201ENST00000356384 LETM2Q2VYF4 491 aa18■□□□□ 0.47
RXRA-201ENST00000356384 FYB2Q5VWT5 728 aa18■□□□□ 0.47
RXRA-201ENST00000356384 JAG2Q9Y219 1238 aa18■□□□□ 0.47
RXRA-201ENST00000356384 TUBBP07437 444 aa18■□□□□ 0.47
RXRA-201ENST00000356384 CSRNP2Q9H175 543 aa18■□□□□ 0.47
RXRA-201ENST00000356384 NPHP3Q7Z494 1330 aa17.99■□□□□ 0.47
RXRA-201ENST00000356384 PSMD6Q15008 389 aa17.99■□□□□ 0.47
RXRA-201ENST00000356384 RNF34Q969K3 372 aa17.99■□□□□ 0.47
RXRA-201ENST00000356384 KIFAP3Q92845 792 aa17.99■□□□□ 0.47
RXRA-201ENST00000356384 IFT74Q96LB3 600 aa17.99■□□□□ 0.47
RXRA-201ENST00000356384 DHX32Q7L7V1 743 aaKnown RBP17.99■□□□□ 0.47
RXRA-201ENST00000356384 FAM184BQ9ULE4 1060 aa17.99■□□□□ 0.47
RXRA-201ENST00000356384 HGSO14964 777 aaPredicted RBP17.99■□□□□ 0.47
RXRA-201ENST00000356384 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
RXRA-201ENST00000356384 DENND4BO75064 1496 aaPredicted RBP17.99■□□□□ 0.47
RXRA-201ENST00000356384 PLCG2P16885 1265 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 PCK1P35558 622 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 GKAP1Q5VSY0 366 aaPredicted RBP17.98■□□□□ 0.47
RXRA-201ENST00000356384 KRBA2Q6ZNG9 492 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 SIRT1Q96EB6 747 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 ZC3H12CQ9C0D7 883 aaKnown RBP17.98■□□□□ 0.47
RXRA-201ENST00000356384 PLCH2O75038 1416 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 RUFY3Q7L099 469 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 MRPL50Q8N5N7 158 aaKnown RBP17.98■□□□□ 0.47
RXRA-201ENST00000356384 VPS16Q9H269 839 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 OGFRQ9NZT2 677 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 SYCP2Q9BX26 1530 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 RIMBP2O15034 1052 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 TBC1D8BQ0IIM8 1120 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 C8orf74Q6P047 294 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 C8orf58Q8NAV2 365 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 PARP1P09874 1014 aaKnown RBP17.98■□□□□ 0.47
RXRA-201ENST00000356384 FMNL3Q8IVF7 1028 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 NSFL1CQ9UNZ2 370 aaKnown RBP17.98■□□□□ 0.47
RXRA-201ENST00000356384 TACC3Q9Y6A5 838 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 DISP1Q96F81 1524 aa17.98■□□□□ 0.47
RXRA-201ENST00000356384 TFCP2Q12800 502 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 CACNA2D3Q8IZS8 1091 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 IGSF22Q8N9C0 903 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 ELP1O95163 1332 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 TTC36A6NLP5 189 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 SDCCAG8Q86SQ7 713 aaPredicted RBP17.97■□□□□ 0.47
RXRA-201ENST00000356384 TTC41PQ6P2S7 1318 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 CHMP2AO43633 222 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 PDE4DQ08499 809 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 CADPS2Q86UW7 1296 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 PPP1R12CQ9BZL4 782 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 RASSF4Q9H2L5 321 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 KIF3CO14782 793 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 CEP120Q8N960 986 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 NAPGQ99747 312 aaPredicted RBP17.97■□□□□ 0.47
RXRA-201ENST00000356384 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
RXRA-201ENST00000356384 PPARDQ03181 441 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 RAB3GAP1Q15042 981 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 ZNF365Q70YC5 407 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 TRIM31Q9BZY9 425 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 RBM28Q9NW13 759 aaKnown RBP17.96■□□□□ 0.47
RXRA-201ENST00000356384 FEZ2Q9UHY8 353 aaPredicted RBP17.96■□□□□ 0.47
RXRA-201ENST00000356384 PPP2R5DQ14738 602 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.96■□□□□ 0.47
RXRA-201ENST00000356384 CCDC169A6NNP5 214 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 DZIP3Q86Y13 1208 aaKnown RBP17.96■□□□□ 0.47
RXRA-201ENST00000356384 VCX3BQ9H321 246 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 PPANQ9NQ55 473 aaKnown RBP17.96■□□□□ 0.47
RXRA-201ENST00000356384 NDUFAB1O14561 156 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 ACTN4O43707 911 aaKnown RBP17.96■□□□□ 0.47
RXRA-201ENST00000356384 LDHBP07195 334 aaKnown RBP17.96■□□□□ 0.47
RXRA-201ENST00000356384 ZNF131P52739 623 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 ERCC6LQ2NKX8 1250 aa17.96■□□□□ 0.47
RXRA-201ENST00000356384 UTP11Q9Y3A2 253 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms