RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ITIH3Q06033 890 aa16.66■□□□□ 0.26
LMX1B-201ENST00000355497 BIRC3Q13489 604 aa16.66■□□□□ 0.26
LMX1B-201ENST00000355497 LIN9Q5TKA1 542 aa16.66■□□□□ 0.26
LMX1B-201ENST00000355497 POTEDQ86YR6 584 aa16.66■□□□□ 0.26
LMX1B-201ENST00000355497 BACH1O14867 736 aa16.66■□□□□ 0.26
LMX1B-201ENST00000355497 UBL4BQ8N7F7 174 aa16.66■□□□□ 0.26
LMX1B-201ENST00000355497 TACC3Q9Y6A5 838 aa16.66■□□□□ 0.26
LMX1B-201ENST00000355497 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
LMX1B-201ENST00000355497 SARNPP82979 210 aaKnown RBP16.66■□□□□ 0.26
LMX1B-201ENST00000355497 ASIC2Q16515 512 aa16.66■□□□□ 0.26
LMX1B-201ENST00000355497 UTP14CQ5TAP6 766 aaKnown RBP16.66■□□□□ 0.26
LMX1B-201ENST00000355497 NYXQ9GZU5 481 aa16.66■□□□□ 0.26
LMX1B-201ENST00000355497 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
LMX1B-201ENST00000355497 VWA3AA6NCI4 1184 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 KRT9P35527 623 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 IGSF22Q8N9C0 903 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 HAUS7Q99871 368 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 ARID4AP29374 1257 aaPredicted RBP16.65■□□□□ 0.26
LMX1B-201ENST00000355497 SMC5Q8IY18 1101 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 SATB1Q01826 763 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 C16orf71Q8IYS4 520 aaPredicted RBP16.65■□□□□ 0.26
LMX1B-201ENST00000355497 INTS4Q96HW7 963 aaKnown RBP16.65■□□□□ 0.26
LMX1B-201ENST00000355497 RAD50Q92878 1312 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 CALUO43852 315 aaPredicted RBP16.65■□□□□ 0.26
LMX1B-201ENST00000355497 IFT20Q8IY31 132 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 NDUFAB1O14561 156 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 STK10O94804 968 aaKnown RBP16.65■□□□□ 0.26
LMX1B-201ENST00000355497 U2AF2P26368 475 aaKnown RBP eCLIP16.65■□□□□ 0.26
LMX1B-201ENST00000355497 SLC8A3P57103 927 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 ZNF365Q70YC5 407 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 MRRFQ96E11 262 aaKnown RBP16.65■□□□□ 0.26
LMX1B-201ENST00000355497 NUF2Q9BZD4 464 aa16.65■□□□□ 0.26
LMX1B-201ENST00000355497 ZNF131P52739 623 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 ZNF174Q15697 407 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 SDCCAG8Q86SQ7 713 aaPredicted RBP16.64■□□□□ 0.25
LMX1B-201ENST00000355497 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
LMX1B-201ENST00000355497 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.25
LMX1B-201ENST00000355497 PCDHB15Q9Y5E8 787 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 A6NNZ2 444 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 TUBB8Q3ZCM7 444 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 CNNM4Q6P4Q7 775 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 TSNAXIP1Q2TAA8 658 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 GABPB2Q8TAK5 448 aaPredicted RBP16.64■□□□□ 0.25
LMX1B-201ENST00000355497 MCUR1Q96AQ8 359 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 ACEP12821 1306 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 GOLGA6CA6NDK9 693 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 GOLGA6DP0CG33 693 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 TAOK1Q7L7X3 1001 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
LMX1B-201ENST00000355497 RNF34Q969K3 372 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 GOLGA6AQ9NYA3 693 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 TBC1D8BQ0IIM8 1120 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 CCDC62Q6P9F0 684 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.64■□□□□ 0.25
LMX1B-201ENST00000355497 NOS1P29475 1434 aa16.64■□□□□ 0.25
LMX1B-201ENST00000355497 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 RXRAP19793 462 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 INPP5BP32019 993 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 PDE4DQ08499 809 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 CROCCP2Q86T23 111 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 A0A1B0GVL5 298 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 TBC1D31Q96DN5 1066 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 NOX5Q96PH1 765 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 VCXQ9H320 206 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
LMX1B-201ENST00000355497 RFC1P35251 1148 aaPredicted RBP16.62■□□□□ 0.25
LMX1B-201ENST00000355497 SP4Q02446 784 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 ARHGAP24Q8N264 748 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 ARHGEF2Q92974 986 aaKnown RBP16.62■□□□□ 0.25
LMX1B-201ENST00000355497 DISP3Q9P2K9 1392 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 PTPN23Q9H3S7 1636 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 IGSF3O75054 1194 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 SETSIPP0DME0 302 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 SMTNP53814 917 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 CLNS1AP54105 237 aaKnown RBP16.62■□□□□ 0.25
LMX1B-201ENST00000355497 LETM2Q2VYF4 491 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 ZKSCAN3Q9BRR0 538 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.62■□□□□ 0.25
LMX1B-201ENST00000355497 PPP1R12CQ9BZL4 782 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 PPANQ9NQ55 473 aaKnown RBP16.62■□□□□ 0.25
LMX1B-201ENST00000355497 TFCP2Q12800 502 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 AKAP4Q5JQC9 854 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 SECISBP2LQ93073 1101 aaKnown RBP16.62■□□□□ 0.25
LMX1B-201ENST00000355497 VPS16Q9H269 839 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 DAPK3O43293 454 aa16.62■□□□□ 0.25
LMX1B-201ENST00000355497 IRX5P78411 483 aaPredicted RBP16.62■□□□□ 0.25
LMX1B-201ENST00000355497 GBP7Q8N8V2 638 aaPredicted RBP16.62■□□□□ 0.25
LMX1B-201ENST00000355497 HARSP12081 509 aaKnown RBP16.61■□□□□ 0.25
LMX1B-201ENST00000355497 HHATQ5VTY9 493 aa16.61■□□□□ 0.25
LMX1B-201ENST00000355497 PROCA1Q8NCQ7 364 aaPredicted RBP16.61■□□□□ 0.25
LMX1B-201ENST00000355497 LDHBP07195 334 aaKnown RBP16.61■□□□□ 0.25
LMX1B-201ENST00000355497 CHRNA2Q15822 529 aa16.61■□□□□ 0.25
LMX1B-201ENST00000355497 FAM114A2Q9NRY5 505 aa16.61■□□□□ 0.25
LMX1B-201ENST00000355497 HELLSQ9NRZ9 838 aa16.61■□□□□ 0.25
LMX1B-201ENST00000355497 GIPC1O14908 333 aa16.61■□□□□ 0.25
LMX1B-201ENST00000355497 C8orf34Q49A92 452 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms