RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 IPO11Q9UI26 975 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 LRFN2Q9ULH4 789 aa12.85□□□□□ -0.35
NUDCD3-202ENST00000355451 KIAA1841Q6NSI8 718 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 DCLK2Q8N568 766 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 SYTL2Q9HCH5 934 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 IQSEC3Q9UPP2 1182 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 ZEB2O60315 1214 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 DCUN1D2Q6PH85 259 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 STK32BQ9NY57 414 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 RTCBQ9Y3I0 505 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 CTAGE9A4FU28 777 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 RILPQ96NA2 401 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 MX2P20592 715 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 MOSPD1Q9UJG1 213 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 SLC4A4Q9Y6R1 1079 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 NPR1P16066 1061 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 PPP1R12CQ9BZL4 782 aa12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 SH2B1Q9NRF2 756 aaPredicted RBP12.84□□□□□ -0.35
NUDCD3-202ENST00000355451 TTC22Q5TAA0 569 aa12.83□□□□□ -0.35
NUDCD3-202ENST00000355451 RPL13P26373 211 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 ZBTB41Q5SVQ8 909 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 MCUR1Q96AQ8 359 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 YARSP54577 528 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 RTN1Q16799 776 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 PPP4R1Q8TF05 950 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 ABCF3Q9NUQ8 709 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 OTUD7BQ6GQQ9 843 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 CSADQ9Y600 493 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 LGSNQ5TDP6 509 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 GRPEL1Q9HAV7 217 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
NUDCD3-202ENST00000355451 DKC1O60832 514 aaKnown RBP eCLIP12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 HSP90AA4PQ58FG1 418 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 FAM180AQ6UWF9 173 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 MAEAQ7L5Y9 396 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 SCYL1Q96KG9 808 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 ZBED2Q9BTP6 218 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 GBP1P32455 592 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 UBASH3AP57075 661 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 CCDC122Q5T0U0 273 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 PCK1P35558 622 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 SYKP43405 635 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 PPP2R5AQ15172 486 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 RUFY3Q7L099 469 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 CAPZA3Q96KX2 299 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 A0A1B0GUL7 405 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 BMP15O95972 392 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 CCPG1Q9ULG6 757 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 NUB1Q9Y5A7 615 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 CTAGE15A4D2H0 777 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 CTAGE8P0CG41 777 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 TRIM50Q86XT4 487 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 CTAGE4Q8IX94 777 aa12.82□□□□□ -0.36
NUDCD3-202ENST00000355451 DNAJC21Q5F1R6 531 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 TMTC2Q8N394 836 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 LZICQ8WZA0 190 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 USTQ9Y2C2 406 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 MCM6Q14566 821 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 IQCB1Q15051 598 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 FNBP4Q8N3X1 1017 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 HDAC11Q96DB2 347 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 MAP10Q9P2G4 905 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 ORC6Q9Y5N6 252 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 NVLO15381 856 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 MCM5P33992 734 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 C16orf72Q14CZ0 275 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 SZRD1Q7Z422 152 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 EXOC7Q9UPT5 735 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 APOBRQ0VD83 1088 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 TMCO5AQ8N6Q1 288 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 SRPK1Q96SB4 655 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 RNASELQ05823 741 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 ZNF365Q70YC5 407 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 SPDL1Q96EA4 605 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 PGBD1Q96JS3 809 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 CPSF2Q9P2I0 782 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 DDX39AO00148 427 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 ZNF165P49910 485 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 KRT81Q14533 505 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 SUCLA2Q9P2R7 463 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 KRT10P13645 584 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 CCDC38Q502W7 563 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 MYLK4Q86YV6 388 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 RPS6KC1Q96S38 1066 aa12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 MMTAG2Q9BU76 263 aaKnown RBP12.81□□□□□ -0.36
NUDCD3-202ENST00000355451 UQCRFS1P1P0C7P4 283 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 CCDC26Q8TAB7 109 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 SLITRK6Q9H5Y7 841 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 CNNM2Q9H8M5 875 aa12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 SCHIP1Q9P0W5 487 aaPredicted RBP12.8□□□□□ -0.36
NUDCD3-202ENST00000355451 MAGEB6P1A0A0J9YX57 407 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms