RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 DNAJC25Q9H1X3 360 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 CLIP2Q9UDT6 1046 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 USP42Q9H9J4 1324 aaKnown RBP12.94□□□□□ -0.34
NEIL1-201ENST00000355059 RGS12O14924 1447 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 PPEF1O14829 653 aaPredicted RBP12.94□□□□□ -0.34
NEIL1-201ENST00000355059 GPAA1O43292 621 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 SCARF1Q14162 830 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 SLC15A2Q16348 729 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 ZNF827Q17R98 1081 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 MFSD14BQ5SR56 506 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 RC3H1Q5TC82 1133 aaKnown RBP12.94□□□□□ -0.34
NEIL1-201ENST00000355059 ZNF396Q96N95 335 aaPredicted RBP12.94□□□□□ -0.34
NEIL1-201ENST00000355059 MCM9Q9NXL9 1143 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 TMOD2Q9NZR1 351 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 MINPP1Q9UNW1 487 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 DLG5Q8TDM6 1919 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 MAGEB6P1A0A0J9YX57 407 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 SLC3A2P08195 630 aaKnown RBP12.94□□□□□ -0.34
NEIL1-201ENST00000355059 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
NEIL1-201ENST00000355059 WTIPA6NIX2 430 aaPredicted RBP12.93□□□□□ -0.34
NEIL1-201ENST00000355059 RXRAP19793 462 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 TCP10Q12799 353 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 ME3Q16798 604 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 DDX19AQ9NUU7 478 aaKnown RBP12.93□□□□□ -0.34
NEIL1-201ENST00000355059 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.93□□□□□ -0.34
NEIL1-201ENST00000355059 AOX1Q06278 1338 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 LTBP4Q8N2S1 1624 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 LARGE1O95461 756 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 CDC37L1Q7L3B6 337 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 SDR42E1Q8WUS8 393 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 NAT10Q9H0A0 1025 aaKnown RBP12.93□□□□□ -0.34
NEIL1-201ENST00000355059 TRMT1Q9NXH9 659 aaKnown RBP12.93□□□□□ -0.34
NEIL1-201ENST00000355059 IFIT3O14879 490 aaKnown RBP12.93□□□□□ -0.34
NEIL1-201ENST00000355059 TNNT1P13805 278 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 MICU3Q86XE3 530 aa12.93□□□□□ -0.34
NEIL1-201ENST00000355059 CCAR2Q8N163 923 aaKnown RBP12.93□□□□□ -0.34
NEIL1-201ENST00000355059 LSG1Q9H089 658 aaKnown RBP12.93□□□□□ -0.34
NEIL1-201ENST00000355059 CCDC69A6NI79 296 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 BAG3O95817 575 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 MTX1Q13505 466 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 ATG9AQ7Z3C6 839 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 OGFOD1Q8N543 542 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 PRIMPOLQ96LW4 560 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 DENND2AQ9ULE3 1009 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 CNTNAP4Q9C0A0 1308 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 LDHCP07864 332 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 ADRA2BP18089 450 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 Q6ZUG5 572 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 CARMIL3Q8ND23 1372 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 STX8Q9UNK0 236 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 RAD17O75943 681 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 GRAPQ13588 217 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 RASGRF1Q13972 1273 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 SPTY2D1Q68D10 685 aaPredicted RBP12.92□□□□□ -0.34
NEIL1-201ENST00000355059 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
NEIL1-201ENST00000355059 EYA3Q99504 573 aa12.92□□□□□ -0.34
NEIL1-201ENST00000355059 VIRMAQ69YN4 1812 aaKnown RBP12.91□□□□□ -0.34
NEIL1-201ENST00000355059 SLC27A2O14975 620 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 ZFYP08048 801 aaPredicted RBP12.91□□□□□ -0.34
NEIL1-201ENST00000355059 TRIM29Q14134 588 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 ZNF589Q86UQ0 364 aaPredicted RBP12.91□□□□□ -0.34
NEIL1-201ENST00000355059 CRNKL1Q9BZJ0 848 aaKnown RBP12.91□□□□□ -0.34
NEIL1-201ENST00000355059 HMG20BQ9P0W2 317 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 MTMR6Q9Y217 621 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 FAM193AP78312 1265 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
NEIL1-201ENST00000355059 DIXDC1Q155Q3 683 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 CEP57L1Q8IYX8 460 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 PI4K2BQ8TCG2 481 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 IL25Q9H293 177 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 LRP6O75581 1613 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 TSPY2A6NKD2 308 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 MCAMP43121 646 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 MAPKAPK5Q8IW41 473 aa12.91□□□□□ -0.34
NEIL1-201ENST00000355059 BIN1O00499 593 aa12.9□□□□□ -0.34
NEIL1-201ENST00000355059 PDE6AP16499 860 aa12.9□□□□□ -0.34
NEIL1-201ENST00000355059 RABL6Q3YEC7 729 aaPredicted RBP12.9□□□□□ -0.34
NEIL1-201ENST00000355059 FAM43BQ6ZT52 329 aaPredicted RBP12.9□□□□□ -0.34
NEIL1-201ENST00000355059 ZNF444Q8N0Y2 327 aaPredicted RBP12.9□□□□□ -0.34
NEIL1-201ENST00000355059 FSIP1Q8NA03 581 aa12.9□□□□□ -0.34
NEIL1-201ENST00000355059 PDGFDQ9GZP0 370 aaPredicted RBP12.9□□□□□ -0.34
NEIL1-201ENST00000355059 LIG1P18858 919 aa12.9□□□□□ -0.34
NEIL1-201ENST00000355059 MFSD6Q6ZSS7 791 aa12.9□□□□□ -0.34
NEIL1-201ENST00000355059 APPBP2Q92624 585 aa12.9□□□□□ -0.34
NEIL1-201ENST00000355059 HAUS7Q99871 368 aa12.9□□□□□ -0.34
NEIL1-201ENST00000355059 TTF2Q9UNY4 1162 aaKnown RBP12.9□□□□□ -0.34
NEIL1-201ENST00000355059 SLIT2O94813 1529 aa12.9□□□□□ -0.34
NEIL1-201ENST00000355059 JAK2O60674 1132 aa12.9□□□□□ -0.35
NEIL1-201ENST00000355059 GPR162Q16538 588 aa12.9□□□□□ -0.35
NEIL1-201ENST00000355059 CCAR1Q8IX12 1150 aaKnown RBP12.9□□□□□ -0.35
NEIL1-201ENST00000355059 TPCN1Q9ULQ1 816 aa12.9□□□□□ -0.35
NEIL1-201ENST00000355059 CIAO1O76071 339 aa12.89□□□□□ -0.35
NEIL1-201ENST00000355059 CTDSPL2Q05D32 466 aa12.89□□□□□ -0.35
NEIL1-201ENST00000355059 TEX11Q8IYF3 940 aa12.89□□□□□ -0.35
NEIL1-201ENST00000355059 CNKSR1Q969H4 720 aa12.89□□□□□ -0.35
NEIL1-201ENST00000355059 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
NEIL1-201ENST00000355059 XDHP47989 1333 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms