RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 RPS8P62241 208 aaKnown RBP18.21■□□□□ 0.51
MBD1-205ENST00000353909 PHKBQ93100 1093 aa18.21■□□□□ 0.51
MBD1-205ENST00000353909 GJD4Q96KN9 370 aaPredicted RBP18.21■□□□□ 0.51
MBD1-205ENST00000353909 WDR19Q8NEZ3 1342 aa18.21■□□□□ 0.5
MBD1-205ENST00000353909 C8orf76Q96K31 380 aa18.2■□□□□ 0.5
MBD1-205ENST00000353909 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
MBD1-205ENST00000353909 LY9Q9HBG7 655 aa18.2■□□□□ 0.5
MBD1-205ENST00000353909 TFCP2L1Q9NZI6 479 aa18.2■□□□□ 0.5
MBD1-205ENST00000353909 THSD7AQ9UPZ6 1657 aa18.2■□□□□ 0.5
MBD1-205ENST00000353909 VPS37DQ86XT2 251 aa18.2■□□□□ 0.5
MBD1-205ENST00000353909 TOMM22Q9NS69 142 aa18.2■□□□□ 0.5
MBD1-205ENST00000353909 RCOR1Q9UKL0 485 aa18.2■□□□□ 0.5
MBD1-205ENST00000353909 DHX16O60231 1041 aaKnown RBP18.19■□□□□ 0.5
MBD1-205ENST00000353909 TXNRD3Q86VQ6 643 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 FBXO18Q8NFZ0 1043 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 JAG2Q9Y219 1238 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 CHD4Q14839 1912 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.19■□□□□ 0.5
MBD1-205ENST00000353909 KIF28PB7ZC32 967 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 METAP2P50579 478 aaKnown RBP eCLIP18.19■□□□□ 0.5
MBD1-205ENST00000353909 DYNLL1P63167 89 aaKnown RBP18.19■□□□□ 0.5
MBD1-205ENST00000353909 MAP3K11Q16584 847 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 TMEM67Q5HYA8 995 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 AKNAD1Q5T1N1 836 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 TNMDQ9H2S6 317 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 LRRC4BQ9NT99 713 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.19■□□□□ 0.5
MBD1-205ENST00000353909 PNPLA7Q6ZV29 1317 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 C4BP0C0L5 1744 aa18.19■□□□□ 0.5
MBD1-205ENST00000353909 CAVIN4Q5BKX8 364 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 FAM217BQ9NTX9 383 aaPredicted RBP18.18■□□□□ 0.5
MBD1-205ENST00000353909 ZMYM6O95789 1325 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 AP5Z1O43299 807 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 TM4SF1P30408 202 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 ZSCAN30Q86W11 494 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 GOLPH3LQ9H4A5 285 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 NHSQ6T4R5 1651 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 SPATA31A6Q5VVP1 1343 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 IFIT3O14879 490 aaKnown RBP18.18■□□□□ 0.5
MBD1-205ENST00000353909 MEX3CQ5U5Q3 659 aaKnown RBP18.18■□□□□ 0.5
MBD1-205ENST00000353909 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 MFSD6Q6ZSS7 791 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 NYXQ9GZU5 481 aa18.18■□□□□ 0.5
MBD1-205ENST00000353909 CYP2D7A0A087X1C5 515 aa18.17■□□□□ 0.5
MBD1-205ENST00000353909 MINDY4BA8MYZ0 360 aa18.17■□□□□ 0.5
MBD1-205ENST00000353909 TMEM87BQ96K49 555 aa18.17■□□□□ 0.5
MBD1-205ENST00000353909 GNL3LQ9NVN8 582 aaKnown RBP18.17■□□□□ 0.5
MBD1-205ENST00000353909 CACNA1SQ13698 1873 aa18.17■□□□□ 0.5
MBD1-205ENST00000353909 AFF2P51816 1311 aa18.17■□□□□ 0.5
MBD1-205ENST00000353909 EVX2Q03828 476 aa18.17■□□□□ 0.5
MBD1-205ENST00000353909 RIOK1Q9BRS2 568 aaKnown RBP18.17■□□□□ 0.5
MBD1-205ENST00000353909 CLSTN2Q9H4D0 955 aa18.17■□□□□ 0.5
MBD1-205ENST00000353909 CLIC4Q9Y696 253 aa18.17■□□□□ 0.5
MBD1-205ENST00000353909 MRVI1Q9Y6F6 885 aa18.17■□□□□ 0.5
MBD1-205ENST00000353909 TAF1LQ8IZX4 1826 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 ZBTB43O43298 467 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 RANBP6O60518 1105 aaKnown RBP18.16■□□□□ 0.5
MBD1-205ENST00000353909 PLCB2Q00722 1185 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 TYRO3Q06418 890 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 NTRK3Q16288 839 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 NACAP1Q9BZK3 213 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 MAGEB6P1A0A0J9YX57 407 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 FBXO33Q7Z6M2 555 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 SGMS1Q86VZ5 419 aa18.16■□□□□ 0.5
MBD1-205ENST00000353909 CCAR1Q8IX12 1150 aaKnown RBP18.16■□□□□ 0.5
MBD1-205ENST00000353909 BAZ2AQ9UIF9 1905 aaKnown RBP18.15■□□□□ 0.5
MBD1-205ENST00000353909 NPHP1O15259 732 aa18.15■□□□□ 0.5
MBD1-205ENST00000353909 GNAT2P19087 354 aa18.15■□□□□ 0.5
MBD1-205ENST00000353909 RFC4P35249 363 aa18.15■□□□□ 0.5
MBD1-205ENST00000353909 ME1P48163 572 aa18.15■□□□□ 0.5
MBD1-205ENST00000353909 DDX19AQ9NUU7 478 aaKnown RBP18.15■□□□□ 0.5
MBD1-205ENST00000353909 ADCY5O95622 1261 aa18.15■□□□□ 0.5
MBD1-205ENST00000353909 HSPA1LP34931 641 aa18.15■□□□□ 0.5
MBD1-205ENST00000353909 PPARAQ07869 468 aa18.15■□□□□ 0.5
MBD1-205ENST00000353909 SEPT12Q8IYM1 358 aa18.15■□□□□ 0.5
MBD1-205ENST00000353909 CMTR1Q8N1G2 835 aaKnown RBP18.15■□□□□ 0.5
MBD1-205ENST00000353909 STAG1Q8WVM7 1258 aa18.15■□□□□ 0.5
MBD1-205ENST00000353909 COL24A1Q17RW2 1714 aa18.14■□□□□ 0.5
MBD1-205ENST00000353909 NFIXQ14938 502 aa18.14■□□□□ 0.5
MBD1-205ENST00000353909 UVSSAQ2YD98 709 aa18.14■□□□□ 0.5
MBD1-205ENST00000353909 CHMP4CQ96CF2 233 aa18.14■□□□□ 0.5
MBD1-205ENST00000353909 ZNF396Q96N95 335 aaPredicted RBP18.14■□□□□ 0.5
MBD1-205ENST00000353909 ALG1Q9BT22 464 aa18.14■□□□□ 0.5
MBD1-205ENST00000353909 SBF2Q86WG5 1849 aa18.14■□□□□ 0.49
MBD1-205ENST00000353909 A0A087WWV3 80 aa18.14■□□□□ 0.49
MBD1-205ENST00000353909 GOLGA8AA7E2F4 631 aa18.14■□□□□ 0.49
MBD1-205ENST00000353909 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
MBD1-205ENST00000353909 CHAF1AQ13111 956 aaPredicted RBP18.14■□□□□ 0.49
MBD1-205ENST00000353909 SNW1Q13573 536 aaKnown RBP18.14■□□□□ 0.49
MBD1-205ENST00000353909 TRAPPC3LQ5T215 181 aa18.14■□□□□ 0.49
MBD1-205ENST00000353909 RBM43Q6ZSC3 357 aaKnown RBP18.14■□□□□ 0.49
MBD1-205ENST00000353909 CCDC82Q8N4S0 544 aa18.14■□□□□ 0.49
MBD1-205ENST00000353909 PCDHA7Q9UN72 937 aa18.14■□□□□ 0.49
MBD1-205ENST00000353909 SLC12A7Q9Y666 1083 aa18.14■□□□□ 0.49
MBD1-205ENST00000353909 TNRC6CQ9HCJ0 1690 aaKnown RBP18.14■□□□□ 0.49
MBD1-205ENST00000353909 PRDX5P30044 214 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms