RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 CCDC82Q8N4S0 544 aa19.31■□□□□ 0.68
PDAP1-201ENST00000350498 CCDC87Q9NVE4 849 aa19.31■□□□□ 0.68
PDAP1-201ENST00000350498 TAF1P21675 1872 aa19.31■□□□□ 0.68
PDAP1-201ENST00000350498 UBE3CQ15386 1083 aa19.31■□□□□ 0.68
PDAP1-201ENST00000350498 DDB1Q16531 1140 aa19.31■□□□□ 0.68
PDAP1-201ENST00000350498 RRP12Q5JTH9 1297 aaKnown RBP19.31■□□□□ 0.68
PDAP1-201ENST00000350498 CCDC73Q6ZRK6 1079 aa19.31■□□□□ 0.68
PDAP1-201ENST00000350498 PTF1AQ7RTS3 328 aa19.31■□□□□ 0.68
PDAP1-201ENST00000350498 LCORLQ8N3X6 602 aa19.31■□□□□ 0.68
PDAP1-201ENST00000350498 ZHX1Q9UKY1 873 aaPredicted RBP19.31■□□□□ 0.68
PDAP1-201ENST00000350498 NIP7Q9Y221 180 aaKnown RBP eCLIP19.31■□□□□ 0.68
PDAP1-201ENST00000350498 LOC102724428A0A0B4J2F2 783 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 SH2B2O14492 632 aaPredicted RBP19.3■□□□□ 0.68
PDAP1-201ENST00000350498 CAMTA2O94983 1202 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 SIK1P57059 783 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 MYSM1Q5VVJ2 828 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 IFNL3Q8IZI9 196 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 ZSWIM5Q9P217 1185 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 ANGEL1Q9UNK9 670 aaKnown RBP19.3■□□□□ 0.68
PDAP1-201ENST00000350498 GOLGA6L19H0YKK7 550 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 BIN1O00499 593 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 IGSF3O75054 1194 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 NCBP1Q09161 790 aaKnown RBP19.3■□□□□ 0.68
PDAP1-201ENST00000350498 TRDNQ13061 729 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 STK38Q15208 465 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 TPD52L1Q16890 204 aaPredicted RBP19.3■□□□□ 0.68
PDAP1-201ENST00000350498 APOA5Q6Q788 366 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 ADGRA1Q86SQ6 560 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 FMR1NBQ8N0W7 255 aaPredicted RBP19.3■□□□□ 0.68
PDAP1-201ENST00000350498 CCDC24Q8N4L8 307 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 IGDCC4Q8TDY8 1250 aa19.3■□□□□ 0.68
PDAP1-201ENST00000350498 FAM217BQ9NTX9 383 aaPredicted RBP19.3■□□□□ 0.68
PDAP1-201ENST00000350498 RANBP6O60518 1105 aaKnown RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 KINO60870 393 aaKnown RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 WDHD1O75717 1129 aaPredicted RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 METAP2P50579 478 aaKnown RBP eCLIP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 KIF23Q02241 960 aaPredicted RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 FAM160A1Q05DH4 1040 aa19.29■□□□□ 0.68
PDAP1-201ENST00000350498 DHX40Q8IX18 779 aaKnown RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 ZNF512BQ96KM6 892 aaPredicted RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 UTP14AQ9BVJ6 771 aaKnown RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 TRMT1Q9NXH9 659 aaKnown RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 RTEL1Q9NZ71 1219 aa19.29■□□□□ 0.68
PDAP1-201ENST00000350498 CTIFO43310 598 aaKnown RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 TTF1Q15361 905 aaPredicted RBP19.29■□□□□ 0.68
PDAP1-201ENST00000350498 TICAM2Q86XR7 235 aa19.29■□□□□ 0.68
PDAP1-201ENST00000350498 ALG1Q9BT22 464 aa19.29■□□□□ 0.68
PDAP1-201ENST00000350498 GSG1L2A8MUP6 293 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 ZSCAN20P17040 1043 aaPredicted RBP19.28■□□□□ 0.68
PDAP1-201ENST00000350498 SF3A1Q15459 793 aaKnown RBP19.28■□□□□ 0.68
PDAP1-201ENST00000350498 BICDL1Q6ZP65 573 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 LRRC8AQ8IWT6 810 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 ANKRD7Q92527 254 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 TOMM22Q9NS69 142 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.28■□□□□ 0.68
PDAP1-201ENST00000350498 V9GYY5 206 aaPredicted RBP19.28■□□□□ 0.68
PDAP1-201ENST00000350498 GUCY1A2P33402 732 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 NFXL1Q6ZNB6 911 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 AOPEPQ8N6M6 819 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 LY9Q9HBG7 655 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 C4AP0C0L4 1744 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 C4BP0C0L5 1744 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 ROBO1Q9Y6N7 1651 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 MROH5Q6ZUA9 1318 aa19.28■□□□□ 0.68
PDAP1-201ENST00000350498 SMAP1Q8IYB5 467 aaPredicted RBP19.27■□□□□ 0.68
PDAP1-201ENST00000350498 ABCC12Q96J65 1359 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 COL14A1Q05707 1796 aaKnown RBP19.27■□□□□ 0.68
PDAP1-201ENST00000350498 MROH7-TTC4A0A0A0MT08 1334 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 SPATA31A1Q5TZJ5 1347 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 BECN2A8MW95 431 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 NTSR2O95665 410 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 SLC5A1P13866 664 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 GYG1P46976 350 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 CHRNDQ07001 517 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 TMEM67Q5HYA8 995 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 SLC51AQ86UW1 340 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 SDR42E1Q8WUS8 393 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 MRPS27Q92552 414 aaKnown RBP19.27■□□□□ 0.68
PDAP1-201ENST00000350498 SDF4Q9BRK5 362 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 NAPBQ9H115 298 aa19.27■□□□□ 0.68
PDAP1-201ENST00000350498 DDX60Q8IY21 1712 aaKnown RBP19.27■□□□□ 0.67
PDAP1-201ENST00000350498 SPTLC2O15270 562 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 EVX2Q03828 476 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 NTRK3Q16288 839 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 STX1AQ16623 288 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 KRT40Q6A162 431 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 ADALQ6DHV7 355 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 KLHL34Q8N239 644 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 PATL2C9JE40 543 aaKnown RBP19.26■□□□□ 0.67
PDAP1-201ENST00000350498 UQCRFS1P1P0C7P4 283 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 DPCR1Q3MIW9 517 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.26■□□□□ 0.67
PDAP1-201ENST00000350498 CLIC6Q96NY7 704 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 ZMYM6O95789 1325 aa19.26■□□□□ 0.67
PDAP1-201ENST00000350498 DHX16O60231 1041 aaKnown RBP19.25■□□□□ 0.67
PDAP1-201ENST00000350498 VPS37DQ86XT2 251 aa19.25■□□□□ 0.67
PDAP1-201ENST00000350498 ABCF2Q9UG63 623 aa19.25■□□□□ 0.67
PDAP1-201ENST00000350498 ATRNO75882 1429 aa19.25■□□□□ 0.67
PDAP1-201ENST00000350498 IFIT3O14879 490 aaKnown RBP19.25■□□□□ 0.67
PDAP1-201ENST00000350498 AXDND1Q5T1B0 1012 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms