RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.11■□□□□ 0.33
COG3-201ENST00000349995 EXOC5O00471 708 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 EP400NLQ6ZTU2 488 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 TTC6Q86TZ1 520 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.11■□□□□ 0.33
COG3-201ENST00000349995 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
COG3-201ENST00000349995 KIF1CO43896 1103 aaKnown RBP17.1■□□□□ 0.33
COG3-201ENST00000349995 KCNG4Q8TDN1 519 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 RABGGTAQ92696 567 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 CDKL5O76039 1030 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 TRIM68Q6AZZ1 485 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 SPTLC2O15270 562 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 LACTBP83111 547 aaPredicted RBP17.1■□□□□ 0.33
COG3-201ENST00000349995 FAM135BQ49AJ0 1406 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 PIK3R5Q8WYR1 880 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 TRIM21P19474 475 aaKnown RBP17.1■□□□□ 0.33
COG3-201ENST00000349995 PPFIA1Q13136 1202 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 PPP1R7Q15435 360 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
COG3-201ENST00000349995 AKR1B15C9JRZ8 316 aaPredicted RBP17.09■□□□□ 0.33
COG3-201ENST00000349995 RNF40O75150 1001 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 AFMP43652 599 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 ADKP55263 362 aaKnown RBP17.09■□□□□ 0.33
COG3-201ENST00000349995 ABCF2Q9UG63 623 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 ABCA6Q8N139 1617 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 A2ML1A8K2U0 1454 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 GOLGA8BA8MQT2 603 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 GCOM1H8Y6P7 765 aaPredicted RBP17.09■□□□□ 0.33
COG3-201ENST00000349995 MYZAPP0CAP1 466 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 LMNTD2Q8IXW0 634 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 RPUSD2Q8IZ73 545 aaKnown RBP17.09■□□□□ 0.33
COG3-201ENST00000349995 PPFIA4O75335 1185 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 CCDC129Q6ZRS4 1044 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 SMARCC2Q8TAQ2 1214 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 MED4Q9NPJ6 270 aa17.09■□□□□ 0.33
COG3-201ENST00000349995 DDX21Q9NR30 783 aaKnown RBP eCLIP17.09■□□□□ 0.33
COG3-201ENST00000349995 TPX2Q9ULW0 747 aaKnown RBP17.09■□□□□ 0.33
COG3-201ENST00000349995 KRT86O43790 486 aa17.08■□□□□ 0.33
COG3-201ENST00000349995 SNCBQ16143 134 aa17.08■□□□□ 0.33
COG3-201ENST00000349995 CCDC122Q5T0U0 273 aa17.08■□□□□ 0.33
COG3-201ENST00000349995 LDHAL6AQ6ZMR3 332 aa17.08■□□□□ 0.33
COG3-201ENST00000349995 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.32
COG3-201ENST00000349995 IFT88Q13099 833 aa17.08■□□□□ 0.32
COG3-201ENST00000349995 MRFAP1Q9Y605 127 aa17.08■□□□□ 0.32
COG3-201ENST00000349995 CEP152O94986 1710 aa17.08■□□□□ 0.32
COG3-201ENST00000349995 CLTAP09496 248 aa17.08■□□□□ 0.32
COG3-201ENST00000349995 PRPF4BQ13523 1007 aaKnown RBP17.08■□□□□ 0.32
COG3-201ENST00000349995 WHAMMP3Q1A5X7 153 aa17.08■□□□□ 0.32
COG3-201ENST00000349995 SEPT11Q9NVA2 429 aaKnown RBP17.08■□□□□ 0.32
COG3-201ENST00000349995 SERPINA10Q9UK55 444 aa17.08■□□□□ 0.32
COG3-201ENST00000349995 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
COG3-201ENST00000349995 PLEKHG1Q9ULL1 1385 aa17.08■□□□□ 0.32
COG3-201ENST00000349995 USP27XA6NNY8 438 aa17.08■□□□□ 0.32
COG3-201ENST00000349995 CCDC170Q8IYT3 715 aa17.08■□□□□ 0.32
COG3-201ENST00000349995 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.08■□□□□ 0.32
COG3-201ENST00000349995 ATP7BP35670 1465 aa17.07■□□□□ 0.32
COG3-201ENST00000349995 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
COG3-201ENST00000349995 SAMD15Q9P1V8 674 aa17.07■□□□□ 0.32
COG3-201ENST00000349995 PPP2R2CQ9Y2T4 447 aa17.07■□□□□ 0.32
COG3-201ENST00000349995 VIMP08670 466 aaKnown RBP17.07■□□□□ 0.32
COG3-201ENST00000349995 CYLC1P35663 651 aaPredicted RBP17.07■□□□□ 0.32
COG3-201ENST00000349995 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.07■□□□□ 0.32
COG3-201ENST00000349995 KIF5AQ12840 1032 aa17.07■□□□□ 0.32
COG3-201ENST00000349995 PHF23Q9BUL5 403 aaPredicted RBP17.07■□□□□ 0.32
COG3-201ENST00000349995 MACROD2A1Z1Q3 448 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 PTPN21Q16825 1174 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 Q6ZUG5 572 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 WDR66Q8TBY9 1149 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 NSRP1Q9H0G5 558 aaKnown RBP17.06■□□□□ 0.32
COG3-201ENST00000349995 USP6P35125 1406 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 GLI2P10070 1586 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 CCDC151A5D8V7 595 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 MTIF2P46199 727 aaKnown RBP17.06■□□□□ 0.32
COG3-201ENST00000349995 ACTN3Q08043 901 aaPredicted RBP17.06■□□□□ 0.32
COG3-201ENST00000349995 WWC2Q6AWC2 1192 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 PSMB7Q99436 277 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 PSDA5PKW4 1024 aaPredicted RBP17.06■□□□□ 0.32
COG3-201ENST00000349995 TACC1O75410 805 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 NOP2P46087 812 aaKnown RBP17.06■□□□□ 0.32
COG3-201ENST00000349995 HAND2P61296 217 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 SATB1Q01826 763 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
COG3-201ENST00000349995 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 SMIM24O75264 130 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 IGSF22Q8N9C0 903 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 TDRD7Q8NHU6 1098 aaKnown RBP17.06■□□□□ 0.32
COG3-201ENST00000349995 CDK5RAP3Q96JB5 506 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 ZHX3Q9H4I2 956 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 LRP2BPQ9P2M1 347 aa17.06■□□□□ 0.32
COG3-201ENST00000349995 GSTTP1A0A1W2PQM5 241 aa17.05■□□□□ 0.32
COG3-201ENST00000349995 SLFNL1Q499Z3 407 aa17.05■□□□□ 0.32
COG3-201ENST00000349995 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
COG3-201ENST00000349995 AKAP2Q9Y2D5 859 aa17.05■□□□□ 0.32
COG3-201ENST00000349995 SNX14Q9Y5W7 946 aa17.05■□□□□ 0.32
COG3-201ENST00000349995 KIAA0232Q92628 1395 aa17.05■□□□□ 0.32
COG3-201ENST00000349995 ADGRB3O60242 1522 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms