RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 RHOXF2Q9BQY4 288 aa20.43■□□□□ 0.86
APP-202ENST00000348990 RASSF4Q9H2L5 321 aa20.43■□□□□ 0.86
APP-202ENST00000348990 TOMM22Q9NS69 142 aa20.43■□□□□ 0.86
APP-202ENST00000348990 CEP126Q9P2H0 1117 aa20.43■□□□□ 0.86
APP-202ENST00000348990 FMN2Q9NZ56 1722 aa20.43■□□□□ 0.86
APP-202ENST00000348990 TSPOAP1O95153 1857 aa20.43■□□□□ 0.86
APP-202ENST00000348990 GCP02774 474 aa20.43■□□□□ 0.86
APP-202ENST00000348990 KRT40Q6A162 431 aa20.43■□□□□ 0.86
APP-202ENST00000348990 GOLGA6L9A6NEM1 432 aa20.43■□□□□ 0.86
APP-202ENST00000348990 MTF1Q14872 753 aa20.43■□□□□ 0.86
APP-202ENST00000348990 SHC4Q6S5L8 630 aa20.43■□□□□ 0.86
APP-202ENST00000348990 CERS3Q8IU89 383 aa20.43■□□□□ 0.86
APP-202ENST00000348990 MYL10Q9BUA6 226 aa20.43■□□□□ 0.86
APP-202ENST00000348990 HOOK1Q9UJC3 728 aaKnown RBP20.43■□□□□ 0.86
APP-202ENST00000348990 PDE11AQ9HCR9 933 aa20.42■□□□□ 0.86
APP-202ENST00000348990 CHMP4BP1P59074 171 aa20.42■□□□□ 0.86
APP-202ENST00000348990 PPFIBP1Q86W92 1011 aa20.42■□□□□ 0.86
APP-202ENST00000348990 PDE4BQ07343 736 aa20.42■□□□□ 0.86
APP-202ENST00000348990 WWC2Q6AWC2 1192 aa20.42■□□□□ 0.86
APP-202ENST00000348990 AGXT2Q9BYV1 514 aa20.42■□□□□ 0.86
APP-202ENST00000348990 STX17P56962 302 aa20.41■□□□□ 0.86
APP-202ENST00000348990 HSP90B2PQ58FF3 399 aa20.41■□□□□ 0.86
APP-202ENST00000348990 SPECC1LQ69YQ0 1117 aa20.41■□□□□ 0.86
APP-202ENST00000348990 HSD3B7Q9H2F3 369 aa20.41■□□□□ 0.86
APP-202ENST00000348990 RNF216Q9NWF9 866 aaPredicted RBP20.41■□□□□ 0.86
APP-202ENST00000348990 TULP2O00295 520 aa20.41■□□□□ 0.86
APP-202ENST00000348990 MAP3K9P80192 1104 aa20.41■□□□□ 0.86
APP-202ENST00000348990 PUS3Q9BZE2 481 aaKnown RBP20.41■□□□□ 0.86
APP-202ENST00000348990 ZBTB3Q9H5J0 574 aa20.41■□□□□ 0.86
APP-202ENST00000348990 KIF5CO60282 957 aa20.4■□□□□ 0.86
APP-202ENST00000348990 GRAMD1CQ8IYS0 662 aa20.4■□□□□ 0.86
APP-202ENST00000348990 RABGGTAQ92696 567 aa20.4■□□□□ 0.86
APP-202ENST00000348990 ZNF569Q5MCW4 686 aa20.4■□□□□ 0.86
APP-202ENST00000348990 MRFAP1Q9Y605 127 aa20.4■□□□□ 0.86
APP-202ENST00000348990 ATP8B1O43520 1251 aa20.4■□□□□ 0.86
APP-202ENST00000348990 SNRPA1P09661 255 aaKnown RBP20.4■□□□□ 0.86
APP-202ENST00000348990 CCDC175P0C221 793 aa20.4■□□□□ 0.86
APP-202ENST00000348990 CDC27P30260 824 aa20.4■□□□□ 0.86
APP-202ENST00000348990 NWD1Q149M9 1564 aa20.4■□□□□ 0.86
APP-202ENST00000348990 MYO1CO00159 1063 aa20.39■□□□□ 0.86
APP-202ENST00000348990 TXLNAP40222 546 aa20.39■□□□□ 0.86
APP-202ENST00000348990 IARSP41252 1262 aaKnown RBP20.39■□□□□ 0.86
APP-202ENST00000348990 METTL16Q86W50 562 aaKnown RBP20.39■□□□□ 0.86
APP-202ENST00000348990 LCMT1Q9UIC8 334 aa20.39■□□□□ 0.86
APP-202ENST00000348990 DENND2AQ9ULE3 1009 aa20.39■□□□□ 0.86
APP-202ENST00000348990 NALCNQ8IZF0 1738 aa20.39■□□□□ 0.85
APP-202ENST00000348990 SOWAHDA6NJG2 315 aa20.39■□□□□ 0.85
APP-202ENST00000348990 POLR2DO15514 142 aaKnown RBP20.39■□□□□ 0.85
APP-202ENST00000348990 IL15P40933 162 aaPredicted RBP20.39■□□□□ 0.85
APP-202ENST00000348990 PI16Q6UXB8 463 aa20.39■□□□□ 0.85
APP-202ENST00000348990 SLC26A6Q9BXS9 759 aa20.39■□□□□ 0.85
APP-202ENST00000348990 FUT8Q9BYC5 575 aa20.39■□□□□ 0.85
APP-202ENST00000348990 SAMSN1Q9NSI8 373 aaKnown RBP20.39■□□□□ 0.85
APP-202ENST00000348990 HPS5Q9UPZ3 1129 aa20.39■□□□□ 0.85
APP-202ENST00000348990 LRRC37A3O60309 1634 aa20.39■□□□□ 0.85
APP-202ENST00000348990 NEDD4P46934 1319 aa20.39■□□□□ 0.85
APP-202ENST00000348990 DIP2BQ9P265 1576 aa20.39■□□□□ 0.85
APP-202ENST00000348990 STX10O60499 249 aa20.38■□□□□ 0.85
APP-202ENST00000348990 FOXP4Q8IVH2 680 aaPredicted RBP20.38■□□□□ 0.85
APP-202ENST00000348990 C19orf44Q9H6X5 657 aa20.38■□□□□ 0.85
APP-202ENST00000348990 TUBE1Q9UJT0 475 aa20.38■□□□□ 0.85
APP-202ENST00000348990 CRYBG1Q9Y4K1 1723 aa20.38■□□□□ 0.85
APP-202ENST00000348990 CHD2O14647 1828 aaKnown RBP20.38■□□□□ 0.85
APP-202ENST00000348990 H3BQF6 201 aa20.38■□□□□ 0.85
APP-202ENST00000348990 FCHSD1Q86WN1 690 aa20.38■□□□□ 0.85
APP-202ENST00000348990 PXDNQ92626 1479 aa20.38■□□□□ 0.85
APP-202ENST00000348990 NCAPD2Q15021 1401 aa20.38■□□□□ 0.85
APP-202ENST00000348990 ANKARQ7Z5J8 1434 aa20.38■□□□□ 0.85
APP-202ENST00000348990 ERLIN1O75477 346 aa20.37■□□□□ 0.85
APP-202ENST00000348990 SLC52A2Q9HAB3 445 aa20.37■□□□□ 0.85
APP-202ENST00000348990 SUGCTQ9HAC7 445 aa20.37■□□□□ 0.85
APP-202ENST00000348990 ANKRD65E5RJM6 399 aa20.37■□□□□ 0.85
APP-202ENST00000348990 CDKL5O76039 1030 aa20.37■□□□□ 0.85
APP-202ENST00000348990 SAFBQ15424 915 aaKnown RBP eCLIP20.37■□□□□ 0.85
APP-202ENST00000348990 MRPL44Q9H9J2 332 aaKnown RBP20.37■□□□□ 0.85
APP-202ENST00000348990 INTS13Q9NVM9 706 aa20.37■□□□□ 0.85
APP-202ENST00000348990 AXIN2Q9Y2T1 843 aa20.37■□□□□ 0.85
APP-202ENST00000348990 EIF3JO75822 258 aaKnown RBP20.37■□□□□ 0.85
APP-202ENST00000348990 ADORA1P30542 326 aa20.37■□□□□ 0.85
APP-202ENST00000348990 RRP12Q5JTH9 1297 aaKnown RBP20.37■□□□□ 0.85
APP-202ENST00000348990 TC2NQ8N9U0 490 aa20.37■□□□□ 0.85
APP-202ENST00000348990 PUS7LQ9H0K6 701 aaKnown RBP20.37■□□□□ 0.85
APP-202ENST00000348990 UBE2Q2LH0YL09 131 aa20.36■□□□□ 0.85
APP-202ENST00000348990 EYA2O00167 538 aa20.36■□□□□ 0.85
APP-202ENST00000348990 ATG9AQ7Z3C6 839 aa20.36■□□□□ 0.85
APP-202ENST00000348990 GOLGA6L1Q8N7Z2 621 aa20.36■□□□□ 0.85
APP-202ENST00000348990 SERTAD1Q9UHV2 236 aa20.36■□□□□ 0.85
APP-202ENST00000348990 GOLGA8AA7E2F4 631 aa20.36■□□□□ 0.85
APP-202ENST00000348990 IDH1O75874 414 aaKnown RBP20.36■□□□□ 0.85
APP-202ENST00000348990 AFMP43652 599 aa20.36■□□□□ 0.85
APP-202ENST00000348990 FMR1Q06787 632 aaKnown RBP eCLIP20.36■□□□□ 0.85
APP-202ENST00000348990 CCDC57Q2TAC2 916 aa20.36■□□□□ 0.85
APP-202ENST00000348990 THEMISQ8N1K5 641 aaPredicted RBP20.36■□□□□ 0.85
APP-202ENST00000348990 IPO4Q8TEX9 1081 aaKnown RBP20.36■□□□□ 0.85
APP-202ENST00000348990 RAI14Q9P0K7 980 aa20.36■□□□□ 0.85
APP-202ENST00000348990 B4E1Z4 1266 aa20.35■□□□□ 0.85
APP-202ENST00000348990 AKR1B15C9JRZ8 316 aaPredicted RBP20.35■□□□□ 0.85
APP-202ENST00000348990 GPAA1O43292 621 aa20.35■□□□□ 0.85
APP-202ENST00000348990 TFRCP02786 760 aaKnown RBP20.35■□□□□ 0.85
APP-202ENST00000348990 KRI1Q8N9T8 703 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms