RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SH3TC1Q8TE82 1336 aa21.46■■□□□ 1.03
SCARF1-202ENST00000348987 ZSCAN12O43309 604 aa21.45■■□□□ 1.02
SCARF1-202ENST00000348987 SF3A1Q15459 793 aaKnown RBP21.45■■□□□ 1.02
SCARF1-202ENST00000348987 DHX32Q7L7V1 743 aaKnown RBP21.45■■□□□ 1.02
SCARF1-202ENST00000348987 GLI3P10071 1580 aa21.45■■□□□ 1.02
SCARF1-202ENST00000348987 SERPINC1P01008 464 aa21.45■■□□□ 1.02
SCARF1-202ENST00000348987 CFAP100Q494V2 611 aa21.45■■□□□ 1.02
SCARF1-202ENST00000348987 RGS22Q8NE09 1264 aa21.45■■□□□ 1.02
SCARF1-202ENST00000348987 VPS18Q9P253 973 aa21.45■■□□□ 1.02
SCARF1-202ENST00000348987 HSPD1P10809 573 aaKnown RBP21.44■■□□□ 1.02
SCARF1-202ENST00000348987 CCDC85AQ96PX6 553 aaPredicted RBP21.44■■□□□ 1.02
SCARF1-202ENST00000348987 GPHNQ9NQX3 736 aaPredicted RBP21.44■■□□□ 1.02
SCARF1-202ENST00000348987 A0A1B0GUL7 405 aa21.44■■□□□ 1.02
SCARF1-202ENST00000348987 FOXR1Q6PIV2 292 aa21.44■■□□□ 1.02
SCARF1-202ENST00000348987 LEKR1Q6ZMV7 388 aa21.44■■□□□ 1.02
SCARF1-202ENST00000348987 IQUBQ8NA54 791 aa21.44■■□□□ 1.02
SCARF1-202ENST00000348987 ZCRB1Q8TBF4 217 aaKnown RBP21.44■■□□□ 1.02
SCARF1-202ENST00000348987 RABGGTAQ92696 567 aa21.44■■□□□ 1.02
SCARF1-202ENST00000348987 ZSWIM4Q9H7M6 989 aa21.44■■□□□ 1.02
SCARF1-202ENST00000348987 SLAIN2Q9P270 581 aa21.44■■□□□ 1.02
SCARF1-202ENST00000348987 CLIC4Q9Y696 253 aa21.44■■□□□ 1.02
SCARF1-202ENST00000348987 MYH15Q9Y2K3 1946 aa21.44■■□□□ 1.02
SCARF1-202ENST00000348987 TMEM232C9JQI7 657 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 ZMYM1Q5SVZ6 1142 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 ICE2Q659A1 982 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 CHMP4CQ96CF2 233 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 PDE11AQ9HCR9 933 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 MAST3O60307 1309 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 RFX7Q2KHR2 1363 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 A0A1W2PQ27 194 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 A0A1W2PQ64 194 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 A0A1W2PQD8 194 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 E7EWF7 191 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 ZNF202O95125 648 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 MCM6Q14566 821 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 STK38Q15208 465 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 LINC00301Q8NCQ3 95 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 RTEL1Q9NZ71 1219 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 PLEKHG2Q9H7P9 1386 aa21.43■■□□□ 1.02
SCARF1-202ENST00000348987 EXOSC10Q01780 885 aaKnown RBP21.42■■□□□ 1.02
SCARF1-202ENST00000348987 CTR9Q6PD62 1173 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 DHX58Q96C10 678 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 PALLDQ8WX93 1383 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 EYA2O00167 538 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 MAP2K7O14733 419 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 POLR3DP05423 398 aaPredicted RBP21.42■■□□□ 1.02
SCARF1-202ENST00000348987 IFIT1P09914 478 aaKnown RBP21.42■■□□□ 1.02
SCARF1-202ENST00000348987 TOP1P11387 765 aaKnown RBP21.42■■□□□ 1.02
SCARF1-202ENST00000348987 OTUD7BQ6GQQ9 843 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 TMEM139Q8IV31 216 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 GOLGA6L1Q8N7Z2 621 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 M0R2C6 588 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 TXLNAP40222 546 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 IL15P40933 162 aaPredicted RBP21.42■■□□□ 1.02
SCARF1-202ENST00000348987 FKBP4Q02790 459 aaKnown RBP eCLIP21.42■■□□□ 1.02
SCARF1-202ENST00000348987 GOLGA1Q92805 767 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 YY1AP1Q9H869 796 aa21.42■■□□□ 1.02
SCARF1-202ENST00000348987 IKBKBO14920 756 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 ARHGAP6O43182 974 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 OSBP2Q969R2 916 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 HELLSQ9NRZ9 838 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 XIRP1Q702N8 1843 aaKnown RBP21.41■■□□□ 1.02
SCARF1-202ENST00000348987 CCDC151A5D8V7 595 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 HSP90AB3PQ58FF7 597 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 PACS2Q86VP3 889 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 FCHSD1Q86WN1 690 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 VSTM4Q8IW00 320 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 DSCC1Q9BVC3 393 aa21.41■■□□□ 1.02
SCARF1-202ENST00000348987 ADORA1P30542 326 aa21.4■■□□□ 1.02
SCARF1-202ENST00000348987 KIFC2Q96AC6 838 aa21.4■■□□□ 1.02
SCARF1-202ENST00000348987 WDR17Q8IZU2 1322 aa21.4■■□□□ 1.02
SCARF1-202ENST00000348987 N4BP1O75113 896 aaKnown RBP21.4■■□□□ 1.02
SCARF1-202ENST00000348987 HAND2P61296 217 aa21.4■■□□□ 1.02
SCARF1-202ENST00000348987 TOGARAM2Q6ZUX3 1019 aa21.4■■□□□ 1.02
SCARF1-202ENST00000348987 IVLP07476 585 aa21.39■■□□□ 1.01
SCARF1-202ENST00000348987 NOM1Q5C9Z4 860 aaKnown RBP21.39■■□□□ 1.01
SCARF1-202ENST00000348987 SALL1Q9NSC2 1324 aa21.39■■□□□ 1.01
SCARF1-202ENST00000348987 FOXP2O15409 715 aa21.39■■□□□ 1.01
SCARF1-202ENST00000348987 CBFA2T2O43439 604 aa21.39■■□□□ 1.01
SCARF1-202ENST00000348987 PDIA3P30101 505 aaKnown RBP21.39■■□□□ 1.01
SCARF1-202ENST00000348987 AGXT2Q9BYV1 514 aa21.39■■□□□ 1.01
SCARF1-202ENST00000348987 ABCC6O95255 1503 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 SPTLC2O15270 562 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 RNF113AO15541 343 aaKnown RBP21.38■■□□□ 1.01
SCARF1-202ENST00000348987 HMGB1P09429 215 aaKnown RBP21.38■■□□□ 1.01
SCARF1-202ENST00000348987 SCARF1Q14162 830 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 PI16Q6UXB8 463 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 PDILTQ8N807 584 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 BAG1Q99933 345 aaPredicted RBP21.38■■□□□ 1.01
SCARF1-202ENST00000348987 TTC31Q49AM3 519 aaPredicted RBP21.38■■□□□ 1.01
SCARF1-202ENST00000348987 HSP90AA4PQ58FG1 418 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 JAKMIP3Q5VZ66 844 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 GPR108Q9NPR9 543 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 JRKLQ9Y4A0 524 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 CARMIL3Q8ND23 1372 aa21.38■■□□□ 1.01
SCARF1-202ENST00000348987 ANKRD65E5RJM6 399 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 FDPSP14324 419 aaKnown RBP21.37■■□□□ 1.01
SCARF1-202ENST00000348987 EVA1CP58658 441 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 BRD3Q15059 726 aa21.37■■□□□ 1.01
SCARF1-202ENST00000348987 KCNG4Q8TDN1 519 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms