RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 MYO1BO43795 1136 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 ADALQ6DHV7 355 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
NUP50-201ENST00000347635 ZNF772Q68DY9 489 aaPredicted RBP16.78■□□□□ 0.28
NUP50-201ENST00000347635 USP28Q96RU2 1077 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 NRXN1Q9ULB1 1477 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
NUP50-201ENST00000347635 MCM6Q14566 821 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 ADCY9O60503 1353 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 XPO4Q9C0E2 1151 aaKnown RBP16.78■□□□□ 0.28
NUP50-201ENST00000347635 CENPHQ9H3R5 247 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 LZTFL1Q9NQ48 299 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 NRBP1Q9UHY1 535 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 ERLIN2O94905 339 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 PLCG2P16885 1265 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 ZHX3Q9H4I2 956 aa16.78■□□□□ 0.28
NUP50-201ENST00000347635 PPP2R3AQ06190 1150 aa16.77■□□□□ 0.28
NUP50-201ENST00000347635 TAF4BQ92750 862 aa16.77■□□□□ 0.28
NUP50-201ENST00000347635 TRIM75PA6NK02 468 aa16.77■□□□□ 0.28
NUP50-201ENST00000347635 PATL2C9JE40 543 aaKnown RBP16.77■□□□□ 0.28
NUP50-201ENST00000347635 ZC3H12CQ9C0D7 883 aaKnown RBP16.77■□□□□ 0.28
NUP50-201ENST00000347635 USP8P40818 1118 aa16.77■□□□□ 0.27
NUP50-201ENST00000347635 TUBB4BP68371 445 aa16.77■□□□□ 0.27
NUP50-201ENST00000347635 ESR2Q92731 530 aa16.77■□□□□ 0.27
NUP50-201ENST00000347635 ZNF274Q96GC6 653 aaPredicted RBP16.77■□□□□ 0.27
NUP50-201ENST00000347635 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.27
NUP50-201ENST00000347635 KIF5BP33176 963 aa16.77■□□□□ 0.27
NUP50-201ENST00000347635 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.27
NUP50-201ENST00000347635 TAF5LO75529 589 aa16.76■□□□□ 0.27
NUP50-201ENST00000347635 SSBP05455 408 aaKnown RBP eCLIP16.76■□□□□ 0.27
NUP50-201ENST00000347635 A1BGP04217 495 aa16.76■□□□□ 0.27
NUP50-201ENST00000347635 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
NUP50-201ENST00000347635 KIAA1468Q9P260 1216 aa16.76■□□□□ 0.27
NUP50-201ENST00000347635 WDHD1O75717 1129 aaPredicted RBP16.76■□□□□ 0.27
NUP50-201ENST00000347635 CACNA2D4Q7Z3S7 1137 aa16.76■□□□□ 0.27
NUP50-201ENST00000347635 SEC62Q99442 399 aaKnown RBP16.76■□□□□ 0.27
NUP50-201ENST00000347635 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
NUP50-201ENST00000347635 USP31Q70CQ4 1352 aa16.76■□□□□ 0.27
NUP50-201ENST00000347635 SCRN1Q12765 414 aa16.76■□□□□ 0.27
NUP50-201ENST00000347635 APPBP2Q92624 585 aa16.76■□□□□ 0.27
NUP50-201ENST00000347635 AKR1B15C9JRZ8 316 aaPredicted RBP16.75■□□□□ 0.27
NUP50-201ENST00000347635 FGFR1OPO95684 399 aaKnown RBP16.75■□□□□ 0.27
NUP50-201ENST00000347635 PAFAH1B1P43034 410 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 CKAP4Q07065 602 aaKnown RBP16.75■□□□□ 0.27
NUP50-201ENST00000347635 ALS2CR12Q96Q35 445 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 ANGEL1Q9UNK9 670 aaKnown RBP16.75■□□□□ 0.27
NUP50-201ENST00000347635 CUTAO60888 179 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 CYP7A1P22680 504 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 TSG101Q99816 390 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 HAUS7Q99871 368 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 PUF60Q9UHX1 559 aaKnown RBP16.75■□□□□ 0.27
NUP50-201ENST00000347635 IVLP07476 585 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 DMTNQ08495 405 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 ZNF569Q5MCW4 686 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 IFIT1BQ5T764 474 aaKnown RBP16.75■□□□□ 0.27
NUP50-201ENST00000347635 TMEM87BQ96K49 555 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 TRIM47Q96LD4 638 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 CABP5Q9NP86 173 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 JADE2Q9NQC1 790 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 ZNF219Q9P2Y4 722 aaPredicted RBP16.75■□□□□ 0.27
NUP50-201ENST00000347635 XAGE2Q96GT9 111 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 CARD6Q9BX69 1037 aa16.75■□□□□ 0.27
NUP50-201ENST00000347635 STX17P56962 302 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 TCIRG1Q13488 830 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 NECTIN1Q15223 517 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 CT47A1Q5JQC4 288 aaPredicted RBP16.74■□□□□ 0.27
NUP50-201ENST00000347635 FAM107BQ9H098 131 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
NUP50-201ENST00000347635 ODF2Q5BJF6 829 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 ZNF594Q96JF6 807 aaPredicted RBP16.74■□□□□ 0.27
NUP50-201ENST00000347635 RTL9Q8NET4 1388 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 UBA7P41226 1012 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 BAG6P46379 1132 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 B4E1Z4 1266 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 KRT2P35908 639 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 ZNF589Q86UQ0 364 aaPredicted RBP16.74■□□□□ 0.27
NUP50-201ENST00000347635 TCP11L1Q9NUJ3 509 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 DENND2AQ9ULE3 1009 aa16.74■□□□□ 0.27
NUP50-201ENST00000347635 ARHGAP6O43182 974 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 RILPL1Q5EBL4 403 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 MYSM1Q5VVJ2 828 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 OGFOD1Q8N543 542 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 TNS3Q68CZ2 1445 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 GPAA1O43292 621 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 STAT6P42226 847 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 TTC14Q96N46 770 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 NCAPD2Q15021 1401 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 TRAF1Q13077 416 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 PROSER3Q2NL68 480 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 CNGA4Q8IV77 575 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 MAGEB6Q8N7X4 407 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 PCDHA7Q9UN72 937 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 TRIM21P19474 475 aaKnown RBP16.73■□□□□ 0.27
NUP50-201ENST00000347635 AMPD3Q01432 767 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 FAM89AQ96GI7 184 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
NUP50-201ENST00000347635 PTPRMP28827 1452 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 NEXMIFQ5QGS0 1516 aa16.73■□□□□ 0.27
NUP50-201ENST00000347635 CYLC1P35663 651 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms