RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 AK2P54819 239 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 CTDSPL2Q05D32 466 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 FUT2Q10981 343 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 CUL4AQ13619 759 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 PKP1Q13835 747 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 MPHOSPH8Q99549 860 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
ATG4A-202ENST00000345734 C4BP0C0L5 1744 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 MROH5Q6ZUA9 1318 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 C4AP0C0L4 1744 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 ARAP2Q8WZ64 1704 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 RNF113AO15541 343 aaKnown RBP11.03□□□□□ -0.64
ATG4A-202ENST00000345734 ZKSCAN1P17029 563 aaPredicted RBP11.03□□□□□ -0.64
ATG4A-202ENST00000345734 FGFR2P21802 821 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 ZMYM1Q5SVZ6 1142 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 RUFY3Q7L099 469 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 LRRC4BQ9NT99 713 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 RTL9Q8NET4 1388 aa11.03□□□□□ -0.64
ATG4A-202ENST00000345734 M0R2C6 588 aa11.02□□□□□ -0.64
ATG4A-202ENST00000345734 ZPR1O75312 459 aa11.02□□□□□ -0.64
ATG4A-202ENST00000345734 HSP90B1P14625 803 aaKnown RBP11.02□□□□□ -0.64
ATG4A-202ENST00000345734 PHKA1P46020 1223 aa11.02□□□□□ -0.64
ATG4A-202ENST00000345734 PUM3Q15397 648 aaKnown RBP11.02□□□□□ -0.64
ATG4A-202ENST00000345734 VPS53Q5VIR6 699 aa11.02□□□□□ -0.64
ATG4A-202ENST00000345734 SYMPKQ92797 1274 aaKnown RBP11.02□□□□□ -0.64
ATG4A-202ENST00000345734 TM6SF1Q9BZW5 370 aa11.02□□□□□ -0.64
ATG4A-202ENST00000345734 CWC22Q9HCG8 908 aaKnown RBP11.02□□□□□ -0.64
ATG4A-202ENST00000345734 HELLSQ9NRZ9 838 aa11.02□□□□□ -0.64
ATG4A-202ENST00000345734 ABCC12Q96J65 1359 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 MAST3O60307 1309 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 IGHMBP2P38935 993 aaKnown RBP11.02□□□□□ -0.65
ATG4A-202ENST00000345734 COL24A1Q17RW2 1714 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 CCDC102BQ68D86 513 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 FAM196AQ6ZSG2 479 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 SAMD7Q7Z3H4 446 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 CCDC24Q8N4L8 307 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 LPIN2Q92539 896 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 RPAP1Q9BWH6 1393 aaPredicted RBP11.02□□□□□ -0.65
ATG4A-202ENST00000345734 PDRG1Q9NUG6 133 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 RABGEF1Q9UJ41 708 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 CYP46A1Q9Y6A2 500 aa11.02□□□□□ -0.65
ATG4A-202ENST00000345734 GTF2E1P29083 439 aaPredicted RBP11.01□□□□□ -0.65
ATG4A-202ENST00000345734 RNF20Q5VTR2 975 aa11.01□□□□□ -0.65
ATG4A-202ENST00000345734 OSBP2Q969R2 916 aa11.01□□□□□ -0.65
ATG4A-202ENST00000345734 SETDB2Q96T68 719 aa11.01□□□□□ -0.65
ATG4A-202ENST00000345734 CYP2E1P05181 493 aaPredicted RBP11□□□□□ -0.65
ATG4A-202ENST00000345734 SF3B3Q15393 1217 aaKnown RBP11□□□□□ -0.65
ATG4A-202ENST00000345734 KRT27Q7Z3Y8 459 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 SERPINA10Q9UK55 444 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 ZDHHC9Q9Y397 364 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 LAMA4Q16363 1823 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 A0A1B0GUL6 1792 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 ARHGAP33O14559 1287 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 LARGE1O95461 756 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 SLC5A1P13866 664 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 ARID4AP29374 1257 aaPredicted RBP11□□□□□ -0.65
ATG4A-202ENST00000345734 NUCB2P80303 420 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 CHRNDQ07001 517 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 SLC10A5Q5PT55 438 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 TRAPPC3LQ5T215 181 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 NBPF5PQ86XG9 351 aaPredicted RBP11□□□□□ -0.65
ATG4A-202ENST00000345734 TICAM2Q86XR7 235 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 LRRN4Q8WUT4 740 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 INTS4Q96HW7 963 aaKnown RBP11□□□□□ -0.65
ATG4A-202ENST00000345734 ZNF512BQ96KM6 892 aaPredicted RBP11□□□□□ -0.65
ATG4A-202ENST00000345734 TCEANC2Q96MN5 208 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 HMG20BQ9P0W2 317 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 LIMCH1Q9UPQ0 1083 aa11□□□□□ -0.65
ATG4A-202ENST00000345734 A0A0G2JLW4 131 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 TRIM37O94972 964 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 CYP21A2P08686 494 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 HSPD1P10809 573 aaKnown RBP10.99□□□□□ -0.65
ATG4A-202ENST00000345734 RFC4P35249 363 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 GJA5P36382 358 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 WASHC4Q2M389 1173 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 TSGA10IPQ3SY00 556 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 CALR3Q96L12 384 aaKnown RBP10.99□□□□□ -0.65
ATG4A-202ENST00000345734 CDC5LQ99459 802 aaKnown RBP10.99□□□□□ -0.65
ATG4A-202ENST00000345734 PIH1D3Q9NQM4 214 aaKnown RBP10.99□□□□□ -0.65
ATG4A-202ENST00000345734 UBR3Q6ZT12 1888 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 WTIPA6NIX2 430 aaPredicted RBP10.99□□□□□ -0.65
ATG4A-202ENST00000345734 C6orf229H3BNL8 230 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 CFHP08603 1231 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 PSMA5P28066 241 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 CELF1Q92879 486 aaKnown RBP10.99□□□□□ -0.65
ATG4A-202ENST00000345734 GLMNQ92990 594 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 NYXQ9GZU5 481 aa10.99□□□□□ -0.65
ATG4A-202ENST00000345734 CFAP99D6REC4 459 aa10.98□□□□□ -0.65
ATG4A-202ENST00000345734 ZFYP08048 801 aaPredicted RBP10.98□□□□□ -0.65
ATG4A-202ENST00000345734 UQCRFS1P1P0C7P4 283 aa10.98□□□□□ -0.65
ATG4A-202ENST00000345734 RPS6KB1P23443 525 aa10.98□□□□□ -0.65
ATG4A-202ENST00000345734 BCAMP50895 628 aa10.98□□□□□ -0.65
ATG4A-202ENST00000345734 PRPF38BQ5VTL8 546 aaKnown RBP10.98□□□□□ -0.65
ATG4A-202ENST00000345734 FOXD4L5Q5VV16 416 aaPredicted RBP10.98□□□□□ -0.65
ATG4A-202ENST00000345734 BLOC1S2Q6QNY1 142 aa10.98□□□□□ -0.65
ATG4A-202ENST00000345734 ANKRD18AQ8IVF6 992 aa10.98□□□□□ -0.65
ATG4A-202ENST00000345734 EPS8L1Q8TE68 723 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms