RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 UTP14CQ5TAP6 766 aaKnown RBP17.7■□□□□ 0.42
PTPRU-201ENST00000345512 ARHGEF25Q86VW2 580 aa17.7■□□□□ 0.42
PTPRU-201ENST00000345512 IGSF22Q8N9C0 903 aa17.7■□□□□ 0.42
PTPRU-201ENST00000345512 PIK3C2BO00750 1634 aa17.7■□□□□ 0.42
PTPRU-201ENST00000345512 MTIF2P46199 727 aaKnown RBP17.7■□□□□ 0.42
PTPRU-201ENST00000345512 ADKP55263 362 aaKnown RBP17.7■□□□□ 0.42
PTPRU-201ENST00000345512 SLC4A8Q2Y0W8 1093 aa17.7■□□□□ 0.42
PTPRU-201ENST00000345512 FKBP15Q5T1M5 1219 aa17.7■□□□□ 0.42
PTPRU-201ENST00000345512 PLA2G4DQ86XP0 818 aa17.7■□□□□ 0.42
PTPRU-201ENST00000345512 FANCLQ9NW38 375 aa17.7■□□□□ 0.42
PTPRU-201ENST00000345512 KCNJ14Q9UNX9 436 aa17.7■□□□□ 0.42
PTPRU-201ENST00000345512 SPAG1Q07617 926 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 LINC00301Q8NCQ3 95 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 SMARCC1Q92922 1105 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-201ENST00000345512 CLIC6Q96NY7 704 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 CENPHQ9H3R5 247 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 LUC7LQ9NQ29 371 aaKnown RBP17.69■□□□□ 0.42
PTPRU-201ENST00000345512 MAST3O60307 1309 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 SALL3Q9BXA9 1300 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 USP32Q8NFA0 1604 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 BMP15O95972 392 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 ITGA6P23229 1130 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 PPP1R13BQ96KQ4 1090 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 TRIM47Q96LD4 638 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 PUS3Q9BZE2 481 aaKnown RBP17.69■□□□□ 0.42
PTPRU-201ENST00000345512 MKNK2Q9HBH9 465 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 KRT18P05783 430 aaKnown RBP17.69■□□□□ 0.42
PTPRU-201ENST00000345512 MCM3P25205 808 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 CCT6AP40227 531 aaKnown RBP17.69■□□□□ 0.42
PTPRU-201ENST00000345512 MLKLQ8NB16 471 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 JADE2Q9NQC1 790 aa17.69■□□□□ 0.42
PTPRU-201ENST00000345512 GPHNQ9NQX3 736 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-201ENST00000345512 PTPN21Q16825 1174 aa17.68■□□□□ 0.42
PTPRU-201ENST00000345512 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
PTPRU-201ENST00000345512 DNA2P51530 1060 aa17.68■□□□□ 0.42
PTPRU-201ENST00000345512 POSTNQ15063 836 aa17.68■□□□□ 0.42
PTPRU-201ENST00000345512 VPS18Q9P253 973 aa17.68■□□□□ 0.42
PTPRU-201ENST00000345512 USP31Q70CQ4 1352 aa17.68■□□□□ 0.42
PTPRU-201ENST00000345512 TSPY2A6NKD2 308 aa17.68■□□□□ 0.42
PTPRU-201ENST00000345512 CAPN2P17655 700 aa17.68■□□□□ 0.42
PTPRU-201ENST00000345512 TRIM21P19474 475 aaKnown RBP17.68■□□□□ 0.42
PTPRU-201ENST00000345512 PSDA5PKW4 1024 aaPredicted RBP17.68■□□□□ 0.42
PTPRU-201ENST00000345512 GUCA1BQ9UMX6 200 aa17.68■□□□□ 0.42
PTPRU-201ENST00000345512 ARMT1Q9H993 441 aa17.67■□□□□ 0.42
PTPRU-201ENST00000345512 PPLO60437 1756 aa17.67■□□□□ 0.42
PTPRU-201ENST00000345512 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
PTPRU-201ENST00000345512 USP5P45974 858 aa17.67■□□□□ 0.42
PTPRU-201ENST00000345512 CTDSPL2Q05D32 466 aa17.67■□□□□ 0.42
PTPRU-201ENST00000345512 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
PTPRU-201ENST00000345512 SPECC1LQ69YQ0 1117 aa17.67■□□□□ 0.42
PTPRU-201ENST00000345512 CTR9Q6PD62 1173 aa17.67■□□□□ 0.42
PTPRU-201ENST00000345512 GOLGA8FQ08AF8 430 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 GOLGA8DPQ0D2H9 430 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 SYCP1Q15431 976 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 SARM1Q6SZW1 724 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 DESI2Q9BSY9 194 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 TAF6LQ9Y6J9 622 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 ZNF532Q9HCE3 1301 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 VWA3AA6NCI4 1184 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 USO1O60763 962 aaKnown RBP17.66■□□□□ 0.42
PTPRU-201ENST00000345512 MATR3P43243 847 aaKnown RBP eCLIP17.66■□□□□ 0.42
PTPRU-201ENST00000345512 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
PTPRU-201ENST00000345512 PYM1Q9BRP8 204 aaKnown RBP17.66■□□□□ 0.42
PTPRU-201ENST00000345512 GOLPH3LQ9H4A5 285 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 POLR3EQ9NVU0 708 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 KIAA0754O94854 1291 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 STAT6P42226 847 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 CHMP4BP1P59074 171 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 ATP2B2Q01814 1243 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 ZNF174Q15697 407 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 CNGA4Q8IV77 575 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 GJB4Q9NTQ9 266 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 RMND1Q9NWS8 449 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 USP27XA6NNY8 438 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 ADORA1P30542 326 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 KRT2P35908 639 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 CDR1P51861 262 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 CACNA2D4Q7Z3S7 1137 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 SERTAD1Q9UHV2 236 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 PCDHA5Q9Y5H7 936 aa17.66■□□□□ 0.42
PTPRU-201ENST00000345512 USP42Q9H9J4 1324 aaKnown RBP17.65■□□□□ 0.42
PTPRU-201ENST00000345512 DEXIO95424 95 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 OSBP2Q969R2 916 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 DLC1Q96QB1 1528 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 M0R2C6 588 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 IL2RBP14784 551 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 PIP4K2BP78356 416 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 SLC39A14Q15043 492 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 VPS16Q9H269 839 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 OVOS2A0A0J9YW53 1432 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 OVOS2Q6IE36 1432 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 SH3TC1Q8TE82 1336 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 GOLGA6L10A6NI86 522 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 WDHD1O75717 1129 aaPredicted RBP17.65■□□□□ 0.42
PTPRU-201ENST00000345512 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 PPP2R2CQ9Y2T4 447 aa17.65■□□□□ 0.42
PTPRU-201ENST00000345512 MAP2P11137 1827 aaKnown RBP17.65■□□□□ 0.42
PTPRU-201ENST00000345512 KIF5BP33176 963 aa17.64■□□□□ 0.42
PTPRU-201ENST00000345512 PAFAH1B1P43034 410 aa17.64■□□□□ 0.42
PTPRU-201ENST00000345512 UBXN1Q04323 297 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms