RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PPP1R9BQ96SB3 815 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 ANKIB1Q9P2G1 1089 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 WDR19Q8NEZ3 1342 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 GOLGA8BA8MQT2 603 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 SEMA3EO15041 775 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 PPFIA3O75145 1194 aa21.86■■□□□ 1.09
HOXA9-201ENST00000343483 HMGN5P82970 282 aaKnown RBP21.86■■□□□ 1.09
HOXA9-201ENST00000343483 NEDD4P46934 1319 aa21.85■■□□□ 1.09
HOXA9-201ENST00000343483 UBR3Q6ZT12 1888 aa21.85■■□□□ 1.09
HOXA9-201ENST00000343483 B4E1Z4 1266 aa21.85■■□□□ 1.09
HOXA9-201ENST00000343483 CTDSPL2Q05D32 466 aa21.85■■□□□ 1.09
HOXA9-201ENST00000343483 CSPP1Q1MSJ5 1256 aa21.85■■□□□ 1.09
HOXA9-201ENST00000343483 SLC51AQ86UW1 340 aa21.85■■□□□ 1.09
HOXA9-201ENST00000343483 RPGRQ92834 1020 aaKnown RBP21.85■■□□□ 1.09
HOXA9-201ENST00000343483 MAGEB6P1A0A0J9YX57 407 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 SERPINB2P05120 415 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 ST5P78524 1137 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 FAM173BQ6P4H8 233 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 CYB5R4Q7L1T6 521 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 NKX2-3Q8TAU0 364 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 CHMP4CQ96CF2 233 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 FOSBP53539 338 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 INCENPQ9NQS7 918 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 KIF3AQ9Y496 699 aa21.84■■□□□ 1.09
HOXA9-201ENST00000343483 CHAF1AQ13111 956 aaPredicted RBP21.83■■□□□ 1.09
HOXA9-201ENST00000343483 NAA16Q6N069 864 aaPredicted RBP21.83■■□□□ 1.09
HOXA9-201ENST00000343483 TXNRD3Q86VQ6 643 aa21.83■■□□□ 1.09
HOXA9-201ENST00000343483 RAB11FIP4Q86YS3 637 aa21.83■■□□□ 1.09
HOXA9-201ENST00000343483 UBE2HP62256 183 aa21.83■■□□□ 1.08
HOXA9-201ENST00000343483 KRT85P78386 507 aa21.83■■□□□ 1.08
HOXA9-201ENST00000343483 ANGEL1Q9UNK9 670 aaKnown RBP21.83■■□□□ 1.08
HOXA9-201ENST00000343483 SDR42E1Q8WUS8 393 aa21.82■■□□□ 1.08
HOXA9-201ENST00000343483 SALL1Q9NSC2 1324 aa21.82■■□□□ 1.08
HOXA9-201ENST00000343483 HPS5Q9UPZ3 1129 aa21.81■■□□□ 1.08
HOXA9-201ENST00000343483 ESPNB1AK53 854 aa21.81■■□□□ 1.08
HOXA9-201ENST00000343483 DHX16O60231 1041 aaKnown RBP21.81■■□□□ 1.08
HOXA9-201ENST00000343483 ZBTB7AO95365 584 aa21.81■■□□□ 1.08
HOXA9-201ENST00000343483 AKNAD1Q5T1N1 836 aa21.81■■□□□ 1.08
HOXA9-201ENST00000343483 MFSD6Q6ZSS7 791 aa21.81■■□□□ 1.08
HOXA9-201ENST00000343483 JAG2Q9Y219 1238 aa21.81■■□□□ 1.08
HOXA9-201ENST00000343483 GOLGB1Q14789 3259 aaKnown RBP21.8■■□□□ 1.08
HOXA9-201ENST00000343483 SH2B2O14492 632 aaPredicted RBP21.8■■□□□ 1.08
HOXA9-201ENST00000343483 STK11IPQ8N1F8 1099 aa21.8■■□□□ 1.08
HOXA9-201ENST00000343483 ZNF384Q8TF68 577 aa21.8■■□□□ 1.08
HOXA9-201ENST00000343483 RIOK1Q9BRS2 568 aaKnown RBP21.8■■□□□ 1.08
HOXA9-201ENST00000343483 TSPY26PQ9H489 355 aa21.8■■□□□ 1.08
HOXA9-201ENST00000343483 CNNM2Q9H8M5 875 aa21.8■■□□□ 1.08
HOXA9-201ENST00000343483 TOMM22Q9NS69 142 aa21.8■■□□□ 1.08
HOXA9-201ENST00000343483 PDS5AQ29RF7 1337 aaKnown RBP21.8■■□□□ 1.08
HOXA9-201ENST00000343483 KDM4AO75164 1064 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 DDR1Q08345 913 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 CRY2Q49AN0 593 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 COL23A1Q86Y22 540 aaPredicted RBP21.79■■□□□ 1.08
HOXA9-201ENST00000343483 CPLX1O14810 134 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 DYNLL1P63167 89 aaKnown RBP21.79■■□□□ 1.08
HOXA9-201ENST00000343483 MECOMQ03112 1051 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 RESTQ13127 1097 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 RRP12Q5JTH9 1297 aaKnown RBP21.79■■□□□ 1.08
HOXA9-201ENST00000343483 NSUN4Q96CB9 384 aaKnown RBP21.79■■□□□ 1.08
HOXA9-201ENST00000343483 TMEM87BQ96K49 555 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 LEMD3Q9Y2U8 911 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 TACC3Q9Y6A5 838 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 XDHP47989 1333 aa21.79■■□□□ 1.08
HOXA9-201ENST00000343483 CLCN1P35523 988 aa21.78■■□□□ 1.08
HOXA9-201ENST00000343483 STAG1Q8WVM7 1258 aa21.78■■□□□ 1.08
HOXA9-201ENST00000343483 KRT23Q9C075 422 aa21.78■■□□□ 1.08
HOXA9-201ENST00000343483 ZSWIM5Q9P217 1185 aa21.78■■□□□ 1.08
HOXA9-201ENST00000343483 IRS2Q9Y4H2 1338 aa21.78■■□□□ 1.08
HOXA9-201ENST00000343483 PRDX5P30044 214 aa21.78■■□□□ 1.08
HOXA9-201ENST00000343483 TMEM67Q5HYA8 995 aa21.78■■□□□ 1.08
HOXA9-201ENST00000343483 CCDC183Q5T5S1 534 aa21.78■■□□□ 1.08
HOXA9-201ENST00000343483 NFXL1Q6ZNB6 911 aa21.78■■□□□ 1.08
HOXA9-201ENST00000343483 RBM17Q96I25 401 aaKnown RBP21.78■■□□□ 1.08
HOXA9-201ENST00000343483 ZSCAN16Q9H4T2 348 aaPredicted RBP21.78■■□□□ 1.08
HOXA9-201ENST00000343483 TFIP11Q9UBB9 837 aaKnown RBP21.78■■□□□ 1.08
HOXA9-201ENST00000343483 CACNA1SQ13698 1873 aa21.77■■□□□ 1.08
HOXA9-201ENST00000343483 MINDY4BA8MYZ0 360 aa21.77■■□□□ 1.08
HOXA9-201ENST00000343483 POLRMTO00411 1230 aaKnown RBP21.77■■□□□ 1.08
HOXA9-201ENST00000343483 PPARAQ07869 468 aa21.77■■□□□ 1.08
HOXA9-201ENST00000343483 TTC6Q86TZ1 520 aa21.77■■□□□ 1.08
HOXA9-201ENST00000343483 IGDCC4Q8TDY8 1250 aa21.77■■□□□ 1.08
HOXA9-201ENST00000343483 SENP2Q9HC62 589 aa21.77■■□□□ 1.08
HOXA9-201ENST00000343483 ATF5Q9Y2D1 282 aaPredicted RBP21.77■■□□□ 1.08
HOXA9-201ENST00000343483 FDPSP14324 419 aaKnown RBP21.76■■□□□ 1.07
HOXA9-201ENST00000343483 HMGB2P26583 209 aaKnown RBP21.76■■□□□ 1.07
HOXA9-201ENST00000343483 SCAND2PQ9GZW5 306 aaPredicted RBP21.76■■□□□ 1.07
HOXA9-201ENST00000343483 IFIT3O14879 490 aaKnown RBP21.76■■□□□ 1.07
HOXA9-201ENST00000343483 METAP2P50579 478 aaKnown RBP eCLIP21.76■■□□□ 1.07
HOXA9-201ENST00000343483 GUCY1B3Q02153 619 aa21.76■■□□□ 1.07
HOXA9-201ENST00000343483 APOA5Q6Q788 366 aa21.76■■□□□ 1.07
HOXA9-201ENST00000343483 RNF214Q8ND24 703 aa21.76■■□□□ 1.07
HOXA9-201ENST00000343483 GPR101Q96P66 508 aaPredicted RBP21.76■■□□□ 1.07
HOXA9-201ENST00000343483 LY9Q9HBG7 655 aa21.76■■□□□ 1.07
HOXA9-201ENST00000343483 TIAM2Q8IVF5 1701 aa21.75■■□□□ 1.07
HOXA9-201ENST00000343483 RXRAP19793 462 aa21.75■■□□□ 1.07
HOXA9-201ENST00000343483 GPSM2P81274 684 aa21.75■■□□□ 1.07
HOXA9-201ENST00000343483 MICU3Q86XE3 530 aa21.75■■□□□ 1.07
HOXA9-201ENST00000343483 SPATA32Q96LK8 384 aa21.75■■□□□ 1.07
HOXA9-201ENST00000343483 RNF41Q9H4P4 317 aaPredicted RBP21.75■■□□□ 1.07
HOXA9-201ENST00000343483 AATFQ9NY61 560 aaKnown RBP eCLIP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms