RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 PCDH11YQ9BZA8 1340 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.12□□□□□ -0.95
UBE4B-202ENST00000343090 HOXB7P09629 217 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 POTEJP0CG39 1038 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 NCBP1Q09161 790 aaKnown RBP9.12□□□□□ -0.95
UBE4B-202ENST00000343090 EAF2Q96CJ1 260 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-202ENST00000343090 BABAM1Q9NWV8 329 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 hCG_1642624A0A1W2PR95 340 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 TBCAO75347 108 aaKnown RBP9.12□□□□□ -0.95
UBE4B-202ENST00000343090 ZAP70P43403 619 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 TNNI2P48788 182 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 SSH3Q8TE77 659 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 CARD6Q9BX69 1037 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 EBAG9O00559 213 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 EHBP1Q8NDI1 1231 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 BAG1Q99933 345 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-202ENST00000343090 KCNH3Q9ULD8 1083 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 CTNND2Q9UQB3 1225 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
UBE4B-202ENST00000343090 MAP2K2P36507 400 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 GPIHBP1Q8IV16 184 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 SAP30BPQ9UHR5 308 aaKnown RBP9.11□□□□□ -0.95
UBE4B-202ENST00000343090 TPCN1Q9ULQ1 816 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 ARHGEF10O15013 1369 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 POLR2DO15514 142 aaKnown RBP9.11□□□□□ -0.95
UBE4B-202ENST00000343090 SMC1AQ14683 1233 aaKnown RBP9.11□□□□□ -0.95
UBE4B-202ENST00000343090 APPBP2Q92624 585 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 ANGEL1Q9UNK9 670 aaKnown RBP9.11□□□□□ -0.95
UBE4B-202ENST00000343090 NEURL1BA8MQ27 555 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 VPS16Q9H269 839 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
UBE4B-202ENST00000343090 KCNJ14Q9UNX9 436 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 V9GY48 417 aaPredicted RBP9.11□□□□□ -0.95
UBE4B-202ENST00000343090 E7EWF7 191 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 ATP2C2O75185 946 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 ZNF202O95125 648 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 CALM1P0DP23 149 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 CALM2P0DP24 149 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 CALM3P0DP25 149 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 GNAQP50148 359 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 FANCCQ00597 558 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 WDR78Q5VTH9 848 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 HDXQ7Z353 690 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 LLPHQ9BRT6 129 aaKnown RBP9.11□□□□□ -0.95
UBE4B-202ENST00000343090 BTG4Q9NY30 223 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 ARHGEF5Q12774 1597 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 LTKP29376 864 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 CETN2P41208 172 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 ST5P78524 1137 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 PPP2R3AQ06190 1150 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 DIS3L2Q8IYB7 885 aaKnown RBP9.11□□□□□ -0.95
UBE4B-202ENST00000343090 CCDC24Q8N4L8 307 aa9.11□□□□□ -0.95
UBE4B-202ENST00000343090 CKAP4Q07065 602 aaKnown RBP9.1□□□□□ -0.95
UBE4B-202ENST00000343090 DTHD1Q6ZMT9 781 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 PIK3AP1Q6ZUJ8 805 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 CEP57Q86XR8 500 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 SCLT1Q96NL6 688 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 C6orf50Q9HD87 102 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 SAMD9LQ8IVG5 1584 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 RIMBP2O15034 1052 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 HSF2BPO75031 334 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 ATL3Q6DD88 541 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 RASEFQ8IZ41 740 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 IQUBQ8NA54 791 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 CCDC42Q96M95 316 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 KIF24Q5T7B8 1368 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
UBE4B-202ENST00000343090 NR1I2O75469 434 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 CALML3P27482 149 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 CETN1Q12798 172 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 ADCK5Q3MIX3 580 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 CEP112Q8N8E3 955 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 STAMQ92783 540 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 RRP36Q96EU6 259 aaKnown RBP9.1□□□□□ -0.95
UBE4B-202ENST00000343090 LRRC27Q9C0I9 530 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 RRP15Q9Y3B9 282 aaKnown RBP9.1□□□□□ -0.95
UBE4B-202ENST00000343090 PLEKHG3A1L390 1219 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 KIF5AQ12840 1032 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 PROSER3Q2NL68 480 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 LETM2Q2VYF4 491 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 LONRF3Q496Y0 759 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 BEND3Q5T5X7 828 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 KRT40Q6A162 431 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 ZNF526Q8TF50 670 aaPredicted RBP9.1□□□□□ -0.95
UBE4B-202ENST00000343090 WWC3Q9ULE0 1092 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 MTMR6Q9Y217 621 aa9.1□□□□□ -0.95
UBE4B-202ENST00000343090 AKR1B15C9JRZ8 316 aaPredicted RBP9.09□□□□□ -0.95
UBE4B-202ENST00000343090 TACC1O75410 805 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 PUM3Q15397 648 aaKnown RBP9.09□□□□□ -0.95
UBE4B-202ENST00000343090 DNAJC21Q5F1R6 531 aaKnown RBP9.09□□□□□ -0.95
UBE4B-202ENST00000343090 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 SIRT2Q8IXJ6 389 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 CMTR1Q8N1G2 835 aaKnown RBP9.09□□□□□ -0.95
UBE4B-202ENST00000343090 IGSF22Q8N9C0 903 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 GOLGA5Q8TBA6 731 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 UBE4AQ14139 1066 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 ZNF804AQ7Z570 1209 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 TRMT44Q8IYL2 757 aaKnown RBP9.09□□□□□ -0.95
UBE4B-202ENST00000343090 C8orf37Q96NL8 207 aa9.09□□□□□ -0.95
UBE4B-202ENST00000343090 UIMC1Q96RL1 719 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms