RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 ADD1P35611 737 aaKnown RBP17.6■□□□□ 0.41
TPM3-208ENST00000341485 IMMTQ16891 758 aaKnown RBP17.6■□□□□ 0.41
TPM3-208ENST00000341485 NAP1L2Q9ULW6 460 aaPredicted RBP17.6■□□□□ 0.41
TPM3-208ENST00000341485 ZNF804BA4D1E1 1349 aa17.6■□□□□ 0.41
TPM3-208ENST00000341485 WTIPA6NIX2 430 aaPredicted RBP17.59■□□□□ 0.41
TPM3-208ENST00000341485 SLC9C2Q5TAH2 1124 aa17.59■□□□□ 0.41
TPM3-208ENST00000341485 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.59■□□□□ 0.41
TPM3-208ENST00000341485 DDX19AQ9NUU7 478 aaKnown RBP17.59■□□□□ 0.41
TPM3-208ENST00000341485 IQSEC3Q9UPP2 1182 aaPredicted RBP17.59■□□□□ 0.41
TPM3-208ENST00000341485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
TPM3-208ENST00000341485 MYO5AQ9Y4I1 1855 aaKnown RBP17.59■□□□□ 0.41
TPM3-208ENST00000341485 GPAA1O43292 621 aa17.59■□□□□ 0.41
TPM3-208ENST00000341485 AP5Z1O43299 807 aa17.59■□□□□ 0.41
TPM3-208ENST00000341485 ADD2P35612 726 aa17.59■□□□□ 0.41
TPM3-208ENST00000341485 EVCP57679 992 aa17.59■□□□□ 0.41
TPM3-208ENST00000341485 BRIP1Q9BX63 1249 aa17.59■□□□□ 0.41
TPM3-208ENST00000341485 CLSTN2Q9H4D0 955 aa17.59■□□□□ 0.41
TPM3-208ENST00000341485 NRXN2Q9P2S2 1712 aa17.59■□□□□ 0.41
TPM3-208ENST00000341485 TYRO3Q06418 890 aa17.58■□□□□ 0.4
TPM3-208ENST00000341485 MAP3K12Q12852 859 aa17.58■□□□□ 0.4
TPM3-208ENST00000341485 DEFB132Q7Z7B7 95 aa17.58■□□□□ 0.4
TPM3-208ENST00000341485 MB21D2Q8IYB1 491 aaPredicted RBP17.58■□□□□ 0.4
TPM3-208ENST00000341485 FAM84BQ96KN1 310 aaPredicted RBP17.58■□□□□ 0.4
TPM3-208ENST00000341485 TNMDQ9H2S6 317 aa17.58■□□□□ 0.4
TPM3-208ENST00000341485 CFAP45Q9UL16 551 aa17.58■□□□□ 0.4
TPM3-208ENST00000341485 KIF3AQ9Y496 699 aa17.58■□□□□ 0.4
TPM3-208ENST00000341485 MRVI1Q9Y6F6 885 aa17.58■□□□□ 0.4
TPM3-208ENST00000341485 PPFIA3O75145 1194 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 NR1I2O75469 434 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 RBM43Q6ZSC3 357 aaKnown RBP17.57■□□□□ 0.4
TPM3-208ENST00000341485 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 BICD2Q8TD16 824 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 CRAMP1Q96RY5 1269 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 XDHP47989 1333 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 KLRG2A4D1S0 409 aaPredicted RBP17.57■□□□□ 0.4
TPM3-208ENST00000341485 PRC1O43663 620 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 BBOX1O75936 387 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
TPM3-208ENST00000341485 MPNDQ8N594 471 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 DENND2AQ9ULE3 1009 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 LEMD3Q9Y2U8 911 aa17.57■□□□□ 0.4
TPM3-208ENST00000341485 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 FDPSP14324 419 aaKnown RBP17.56■□□□□ 0.4
TPM3-208ENST00000341485 PDE6AP16499 860 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 KLRK1P26718 216 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 HIBADHP31937 336 aaKnown RBP17.56■□□□□ 0.4
TPM3-208ENST00000341485 PDE6BP35913 854 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 ANTXR2P58335 489 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 UBE3CQ15386 1083 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 FTOQ9C0B1 505 aaKnown RBP eCLIP17.56■□□□□ 0.47e-6■■□□□ 12.9
TPM3-208ENST00000341485 WWC3Q9ULE0 1092 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 ZNF532Q9HCE3 1301 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 QSER1Q2KHR3 1735 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 CEBPZQ03701 1054 aaKnown RBP17.56■□□□□ 0.4
TPM3-208ENST00000341485 FBXO33Q7Z6M2 555 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 FAM200AQ8TCP9 573 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 LRP2BPQ9P2M1 347 aa17.56■□□□□ 0.4
TPM3-208ENST00000341485 DOCK2Q92608 1830 aa17.55■□□□□ 0.4
TPM3-208ENST00000341485 GUCY1B3Q02153 619 aa17.55■□□□□ 0.4
TPM3-208ENST00000341485 MAGEB6Q8N7X4 407 aa17.55■□□□□ 0.4
TPM3-208ENST00000341485 NCOA7Q8NI08 942 aa17.55■□□□□ 0.4
TPM3-208ENST00000341485 CHMP4CQ96CF2 233 aa17.55■□□□□ 0.4
TPM3-208ENST00000341485 RCOR1Q9UKL0 485 aa17.55■□□□□ 0.4
TPM3-208ENST00000341485 ZNF213O14771 459 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 SEMA3EO15041 775 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 GPSM2P81274 684 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 ILDR1Q86SU0 546 aaPredicted RBP17.54■□□□□ 0.4
TPM3-208ENST00000341485 NBPF3Q9H094 633 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 HPS5Q9UPZ3 1129 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 PPEF1O14829 653 aaPredicted RBP17.54■□□□□ 0.4
TPM3-208ENST00000341485 NPR1P16066 1061 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 PLCB2Q00722 1185 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 TMC4Q7Z404 712 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 SLC51AQ86UW1 340 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 ZNF830Q96NB3 372 aaPredicted RBP17.54■□□□□ 0.4
TPM3-208ENST00000341485 USP28Q96RU2 1077 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 ABCF2Q9UG63 623 aa17.54■□□□□ 0.4
TPM3-208ENST00000341485 KLF18A0A0U1RQI7 1052 aa17.53■□□□□ 0.4
TPM3-208ENST00000341485 ATP2B4P23634 1241 aa17.53■□□□□ 0.4
TPM3-208ENST00000341485 WDR19Q8NEZ3 1342 aa17.53■□□□□ 0.4
TPM3-208ENST00000341485 MYH13Q9UKX3 1938 aa17.52■□□□□ 0.4
TPM3-208ENST00000341485 GOLGA8BA8MQT2 603 aa17.52■□□□□ 0.4
TPM3-208ENST00000341485 SRGNP10124 158 aa17.52■□□□□ 0.4
TPM3-208ENST00000341485 ANO6Q4KMQ2 910 aa17.52■□□□□ 0.4
TPM3-208ENST00000341485 ATL3Q6DD88 541 aa17.52■□□□□ 0.4
TPM3-208ENST00000341485 RALYLQ86SE5 291 aaKnown RBP17.52■□□□□ 0.4
TPM3-208ENST00000341485 AIDAQ96BJ3 306 aa17.52■□□□□ 0.4
TPM3-208ENST00000341485 ZNF396Q96N95 335 aaPredicted RBP17.52■□□□□ 0.4
TPM3-208ENST00000341485 RAI14Q9P0K7 980 aa17.52■□□□□ 0.4
TPM3-208ENST00000341485 GGA1Q9UJY5 639 aa17.52■□□□□ 0.4
TPM3-208ENST00000341485 COL1A1P02452 1464 aaPredicted RBP17.52■□□□□ 0.4
TPM3-208ENST00000341485 TCRBV5S4A2TA0A5A2 114 aa17.52■□□□□ 0.39
TPM3-208ENST00000341485 UFL1O94874 794 aa17.52■□□□□ 0.39
TPM3-208ENST00000341485 TPM2P07951 284 aa17.52■□□□□ 0.39
TPM3-208ENST00000341485 ALDH1B1P30837 517 aa17.52■□□□□ 0.39
TPM3-208ENST00000341485 KIAA2012Q0VF49 1180 aa17.52■□□□□ 0.39
TPM3-208ENST00000341485 TXNRD3Q86VQ6 643 aa17.52■□□□□ 0.39
TPM3-208ENST00000341485 CBX8Q9HC52 389 aa17.52■□□□□ 0.39
TPM3-208ENST00000341485 CHAF1AQ13111 956 aaPredicted RBP17.51■□□□□ 0.39
TPM3-208ENST00000341485 ZNF804AQ7Z570 1209 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms