RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 EZH2Q15910 746 aaKnown RBP14.62□□□□□ -0.07
DNMT1-201ENST00000340748 BRDTQ58F21 947 aaPredicted RBP14.62□□□□□ -0.07
DNMT1-201ENST00000340748 ARMC9Q7Z3E5 817 aa14.62□□□□□ -0.07
DNMT1-201ENST00000340748 KIF24Q5T7B8 1368 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 PPFIA3O75145 1194 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 ISM2Q6H9L7 571 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 KIAA0825Q8IV33 1275 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 GTPBP4Q9BZE4 634 aaKnown RBP14.61□□□□□ -0.07
DNMT1-201ENST00000340748 CHL1O00533 1208 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 ARHGEF10LQ9HCE6 1279 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 GPHNQ9NQX3 736 aaPredicted RBP14.61□□□□□ -0.07
DNMT1-201ENST00000340748 XRCC6P12956 609 aaKnown RBP eCLIP14.61□□□□□ -0.07
DNMT1-201ENST00000340748 CALML3P27482 149 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 KDM2BQ8NHM5 1336 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 C1orf167Q5SNV9 1468 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
DNMT1-201ENST00000340748 NPR1P16066 1061 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 IFI16Q16666 785 aaKnown RBP14.6□□□□□ -0.07
DNMT1-201ENST00000340748 ILDR1Q86SU0 546 aaPredicted RBP14.6□□□□□ -0.07
DNMT1-201ENST00000340748 SHROOM2Q13796 1616 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 TCP10L2B9ZVM9 353 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 TBCAO75347 108 aaKnown RBP14.6□□□□□ -0.07
DNMT1-201ENST00000340748 RPS6KA4O75676 772 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 TRIM75PA6NK02 468 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 CCDC172P0C7W6 258 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 NEBLO76041 1014 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 HS1BP3Q53T59 392 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 GADL1Q6ZQY3 521 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 TEKT1Q969V4 418 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 MASTLQ96GX5 879 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 ADGRB3O60242 1522 aa14.6□□□□□ -0.07
DNMT1-201ENST00000340748 TCERG1LQ5VWI1 586 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 PTPDC1A2A3K4 754 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 CC2D2BQ6DHV5 1058 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 DRC1Q96MC2 740 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 MAP3K15Q6ZN16 1313 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 RAD17O75943 681 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 MFSD14BQ5SR56 506 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 ZNF594Q96JF6 807 aaPredicted RBP14.59□□□□□ -0.07
DNMT1-201ENST00000340748 KCNQ2O43526 872 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 CLCN1P35523 988 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 EIF4A1P60842 406 aaKnown RBP14.59□□□□□ -0.07
DNMT1-201ENST00000340748 GNG11P61952 73 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 TYRO3Q06418 890 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 TTLL7Q6ZT98 887 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 HEATR3Q7Z4Q2 680 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 AS3MTQ9HBK9 375 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 KRT2P35908 639 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 AFMP43652 599 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 APOBRQ0VD83 1088 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 CIAPIN1Q6FI81 312 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 C2orf69Q8N8R5 385 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 C6orf50Q9HD87 102 aa14.59□□□□□ -0.07
DNMT1-201ENST00000340748 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.07
DNMT1-201ENST00000340748 GCOM1H8Y6P7 765 aaPredicted RBP14.58□□□□□ -0.07
DNMT1-201ENST00000340748 KCNQ3O43525 872 aa14.58□□□□□ -0.07
DNMT1-201ENST00000340748 MYZAPP0CAP1 466 aa14.58□□□□□ -0.07
DNMT1-201ENST00000340748 IFFO1Q0D2I5 559 aa14.58□□□□□ -0.07
DNMT1-201ENST00000340748 G2E3Q7L622 706 aa14.58□□□□□ -0.07
DNMT1-201ENST00000340748 TMC4Q7Z404 712 aa14.58□□□□□ -0.07
DNMT1-201ENST00000340748 AOPEPQ8N6M6 819 aa14.58□□□□□ -0.07
DNMT1-201ENST00000340748 CRB1P82279 1406 aa14.58□□□□□ -0.08
DNMT1-201ENST00000340748 SKILP12757 684 aa14.58□□□□□ -0.08
DNMT1-201ENST00000340748 CYLC1P35663 651 aaPredicted RBP14.58□□□□□ -0.08
DNMT1-201ENST00000340748 NOLC1Q14978 699 aaKnown RBP eCLIP14.58□□□□□ -0.087e-9■■■■□ 21.9
DNMT1-201ENST00000340748 SYCP3Q8IZU3 236 aa14.58□□□□□ -0.08
DNMT1-201ENST00000340748 DNAJC25Q9H1X3 360 aa14.58□□□□□ -0.08
DNMT1-201ENST00000340748 SLC5A4Q9NY91 659 aa14.58□□□□□ -0.08
DNMT1-201ENST00000340748 PSMA7O14818 248 aa14.58□□□□□ -0.08
DNMT1-201ENST00000340748 PABPC4Q13310 644 aaKnown RBP eCLIP14.58□□□□□ -0.082e-9■■■■□ 20.9
DNMT1-201ENST00000340748 SMARCC2Q8TAQ2 1214 aa14.58□□□□□ -0.08
DNMT1-201ENST00000340748 RBM28Q9NW13 759 aaKnown RBP14.58□□□□□ -0.08
DNMT1-201ENST00000340748 KIF1BO60333 1816 aa14.58□□□□□ -0.08
DNMT1-201ENST00000340748 EYA2O00167 538 aa14.58□□□□□ -0.08
DNMT1-201ENST00000340748 MARCKSP29966 332 aaPredicted RBP14.58□□□□□ -0.08
DNMT1-201ENST00000340748 CKAP4Q07065 602 aaKnown RBP14.58□□□□□ -0.08
DNMT1-201ENST00000340748 ERICH4A6NGS2 130 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 NAPAP54920 295 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 CCDC91Q7Z6B0 441 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 SEC24BO95487 1268 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 SCNN1DP51172 638 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 CTSWP56202 376 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 MAP3K9P80192 1104 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 CBX1P83916 185 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 CCDC186Q7Z3E2 898 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 DYDC1Q8WWB3 177 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 TMX1Q9H3N1 280 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 DBNDD1Q9H9R9 158 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 USP40Q9NVE5 1235 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 MKRN3Q13064 507 aaKnown RBP14.57□□□□□ -0.08
DNMT1-201ENST00000340748 BMS1Q14692 1282 aaKnown RBP14.57□□□□□ -0.08
DNMT1-201ENST00000340748 ZKSCAN5Q9Y2L8 839 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 RNF123Q5XPI4 1314 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 BBOX1O75936 387 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 CNGA1P29973 690 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 MROH5Q6ZUA9 1318 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 CDC42BPGQ6DT37 1551 aa14.57□□□□□ -0.08
DNMT1-201ENST00000340748 RPS6KB1P23443 525 aa14.56□□□□□ -0.08
DNMT1-201ENST00000340748 SUPT20HL1Q3ZLR7 823 aa14.56□□□□□ -0.08
DNMT1-201ENST00000340748 PAGR1Q9BTK6 254 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms