RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 GRAPLQ8TC17 118 aaPredicted RBP8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 RIOK1Q9BRS2 568 aaKnown RBP8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 FTOQ9C0B1 505 aaKnown RBP eCLIP8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 GNL3LQ9NVN8 582 aaKnown RBP8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 RGS17Q9UGC6 210 aaPredicted RBP8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 IRS2Q9Y4H2 1338 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 TDO2P48775 406 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 GPSM2P81274 684 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 SMARCC2Q8TAQ2 1214 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 NSUN4Q96CB9 384 aaKnown RBP8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 TOMM22Q9NS69 142 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 AATFQ9NY61 560 aaKnown RBP eCLIP8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 ARAP2Q8WZ64 1704 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
SRFBP1-201ENST00000339397 PRDM1O75626 825 aa8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 CEBPZQ03701 1054 aaKnown RBP8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 NAA16Q6N069 864 aaPredicted RBP8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 TTC6Q86TZ1 520 aa8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 IGDCC4Q8TDY8 1250 aa8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 RPGRQ92834 1020 aaKnown RBP8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 ZNF274Q96GC6 653 aaPredicted RBP8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 AIFM3Q96NN9 605 aa8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 GRPEL1Q9HAV7 217 aa8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 COL24A1Q17RW2 1714 aa8.71□□□□□ -1.01
SRFBP1-201ENST00000339397 MAGEB6P1A0A0J9YX57 407 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 GOLGA8BA8MQT2 603 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 CDC27P30260 824 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 TRDNQ13061 729 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 CRY2Q49AN0 593 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 SALL1Q9NSC2 1324 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 EVCP57679 992 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 DIXDC1Q155Q3 683 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 ALX1Q15699 326 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 POTEAQ6S8J7 498 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 MICU3Q86XE3 530 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 CMTR1Q8N1G2 835 aaKnown RBP8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 FAM184AQ8NB25 1140 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 ANKRD2Q9GZV1 360 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 POLLQ9UGP5 575 aa8.71□□□□□ -1.02
SRFBP1-201ENST00000339397 AKNAD1Q5T1N1 836 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 PHKBQ93100 1093 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 ANGEL1Q9UNK9 670 aaKnown RBP8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 PNPLA7Q6ZV29 1317 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 H3BQV1 296 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 PTMSP20962 102 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 RXRBP28702 533 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 IFFO2Q5TF58 517 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 ZNF772Q68DY9 489 aaPredicted RBP8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 MFSD6Q6ZSS7 791 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 FBXL16Q8N461 479 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 AKT1S1Q96B36 256 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 PDGFDQ9GZP0 370 aaPredicted RBP8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 LY9Q9HBG7 655 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 A0A1B0GUL6 1792 aa8.7□□□□□ -1.02
SRFBP1-201ENST00000339397 CACNA1SQ13698 1873 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 DOCK2Q92608 1830 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 USP17L12C9JPN9 530 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 USP17L21D6R901 530 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 SH2B2O14492 632 aaPredicted RBP8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 UFL1O94874 794 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 CYP2D6P10635 497 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 PDCP20941 246 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 ST5P78524 1137 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 PPARAQ07869 468 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 RBSNQ9H1K0 784 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 FAM217BQ9NTX9 383 aaPredicted RBP8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 IFIT3O14879 490 aaKnown RBP8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 PLSCR1O15162 318 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 RESTQ13127 1097 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 TMEM67Q5HYA8 995 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 APOA5Q6Q788 366 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 MYH13Q9UKX3 1938 aa8.69□□□□□ -1.02
SRFBP1-201ENST00000339397 XDHP47989 1333 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 RIMBP2O15034 1052 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 NMT2O60551 498 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 MMP10P09238 476 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 CTR9Q6PD62 1173 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 TMEM87AQ8NBN3 555 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 CHMP4CQ96CF2 233 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 LLPHQ9BRT6 129 aaKnown RBP8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 BAZ2AQ9UIF9 1905 aaKnown RBP8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 POLR3DP05423 398 aaPredicted RBP8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 ZNF445P59923 1031 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 NFXL1Q6ZNB6 911 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 RNF214Q8ND24 703 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 TDRD7Q8NHU6 1098 aaKnown RBP8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 NACAP1Q9BZK3 213 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 ORC3Q9UBD5 711 aaPredicted RBP8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 ATP6V1DQ9Y5K8 247 aa8.68□□□□□ -1.02
SRFBP1-201ENST00000339397 C6orf229H3BNL8 230 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 USP17L8P0C7I0 530 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 LIG1P18858 919 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 MRE11P49959 708 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 EN1Q05925 392 aaPredicted RBP8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 STAG1Q8WVM7 1258 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 PGBD1Q96JS3 809 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 MXD3Q9BW11 206 aa8.67□□□□□ -1.02
SRFBP1-201ENST00000339397 CD209Q9NNX6 404 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms