RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PRELPP51888 382 aa17.37■□□□□ 0.37
NIPAL3-202ENST00000339255 KIAA0825Q8IV33 1275 aa17.37■□□□□ 0.37
NIPAL3-202ENST00000339255 LCORLQ8N3X6 602 aa17.37■□□□□ 0.37
NIPAL3-202ENST00000339255 OGFOD1Q8N543 542 aa17.37■□□□□ 0.37
NIPAL3-202ENST00000339255 GMLQ99445 158 aa17.37■□□□□ 0.37
NIPAL3-202ENST00000339255 MXD3Q9BW11 206 aa17.37■□□□□ 0.37
NIPAL3-202ENST00000339255 HDAC9Q9UKV0 1011 aa17.37■□□□□ 0.37
NIPAL3-202ENST00000339255 RBM8AQ9Y5S9 174 aaKnown RBP17.37■□□□□ 0.37
NIPAL3-202ENST00000339255 NAV1Q8NEY1 1877 aa17.37■□□□□ 0.37
NIPAL3-202ENST00000339255 BAZ2AQ9UIF9 1905 aaKnown RBP17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 F8W031 263 aaPredicted RBP17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 GIMAP6Q6P9H5 292 aa17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 AATFQ9NY61 560 aaKnown RBP eCLIP17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 DAGLAQ9Y4D2 1042 aa17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 PATL2C9JE40 543 aaKnown RBP17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 ALX1Q15699 326 aa17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 VPS53Q5VIR6 699 aa17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 DDRGK1Q96HY6 314 aa17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 ZDHHC15Q96MV8 337 aa17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 SLC4A4Q9Y6R1 1079 aa17.36■□□□□ 0.37
NIPAL3-202ENST00000339255 LAMB1P07942 1786 aa17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 ZC3H4Q9UPT8 1303 aaKnown RBP17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 FOXP2O15409 715 aa17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 APPP05067 770 aa17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 ZKSCAN1P17029 563 aaPredicted RBP17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 BTDP43251 543 aa17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 CRKP46108 304 aa17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 NECTIN1Q15223 517 aa17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 IL17RAQ96F46 866 aa17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 ATP8A2Q9NTI2 1148 aa17.35■□□□□ 0.37
NIPAL3-202ENST00000339255 USP17L8P0C7I0 530 aa17.34■□□□□ 0.37
NIPAL3-202ENST00000339255 SCNN1DP51172 638 aa17.34■□□□□ 0.37
NIPAL3-202ENST00000339255 IL27Q8NEV9 243 aa17.34■□□□□ 0.37
NIPAL3-202ENST00000339255 DPF2Q92785 391 aa17.34■□□□□ 0.37
NIPAL3-202ENST00000339255 RNF181Q9P0P0 153 aa17.34■□□□□ 0.37
NIPAL3-202ENST00000339255 DDX60LQ5H9U9 1706 aaKnown RBP17.33■□□□□ 0.37
NIPAL3-202ENST00000339255 MYH1P12882 1939 aa17.33■□□□□ 0.37
NIPAL3-202ENST00000339255 GSG1L2A8MUP6 293 aa17.33■□□□□ 0.37
NIPAL3-202ENST00000339255 DYNLL1P63167 89 aaKnown RBP17.33■□□□□ 0.37
NIPAL3-202ENST00000339255 KCNB2Q92953 911 aa17.33■□□□□ 0.37
NIPAL3-202ENST00000339255 NAPBQ9H115 298 aa17.33■□□□□ 0.37
NIPAL3-202ENST00000339255 FGAP02671 866 aa17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 IMMTQ16891 758 aaKnown RBP17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 CREB3L3Q68CJ9 461 aa17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 GPC2Q8N158 579 aa17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 TDO2P48775 406 aa17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 KRT32Q14532 448 aa17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 TSGA10IPQ3SY00 556 aa17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 IFNL3Q8IZI9 196 aa17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 MTMR14Q8NCE2 650 aa17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 SH3RF3Q8TEJ3 882 aaPredicted RBP17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 ZNF541Q9H0D2 1346 aa17.32■□□□□ 0.36
NIPAL3-202ENST00000339255 SLC27A2O14975 620 aa17.31■□□□□ 0.36
NIPAL3-202ENST00000339255 RBM5P52756 815 aaKnown RBP eCLIP17.31■□□□□ 0.36
NIPAL3-202ENST00000339255 RHBDL3P58872 404 aa17.31■□□□□ 0.36
NIPAL3-202ENST00000339255 C9orf131Q5VYM1 1079 aa17.31■□□□□ 0.36
NIPAL3-202ENST00000339255 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
NIPAL3-202ENST00000339255 TEX11Q8IYF3 940 aa17.31■□□□□ 0.36
NIPAL3-202ENST00000339255 EPB41L4AQ9HCS5 686 aaPredicted RBP17.31■□□□□ 0.36
NIPAL3-202ENST00000339255 ZBTB12Q9Y330 459 aaPredicted RBP17.31■□□□□ 0.36
NIPAL3-202ENST00000339255 PRKAB2O43741 272 aa17.3■□□□□ 0.36
NIPAL3-202ENST00000339255 ZNF280AP59817 542 aaPredicted RBP17.3■□□□□ 0.36
NIPAL3-202ENST00000339255 SDR42E1Q8WUS8 393 aa17.3■□□□□ 0.36
NIPAL3-202ENST00000339255 UTRNP46939 3433 aa17.3■□□□□ 0.36
NIPAL3-202ENST00000339255 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 USP5P45974 858 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 GMPSP49915 693 aaPredicted RBP17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 RABEP1Q15276 862 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 DLGAP5Q15398 846 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 CFAP100Q494V2 611 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 AMOTL1Q8IY63 956 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 DCP1AQ9NPI6 582 aaPredicted RBP17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 ARPP21Q9UBL0 812 aaPredicted RBP17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 PALD1Q9ULE6 856 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 SNX14Q9Y5W7 946 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 SPDYE2BA6NHP3 402 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 ZNF213O14771 459 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 CYP21A2P08686 494 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 SPDYE6P0CI01 402 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 CDC42EP5Q6NZY7 148 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 KIF2CQ99661 725 aa17.29■□□□□ 0.36
NIPAL3-202ENST00000339255 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
NIPAL3-202ENST00000339255 PSMA5P28066 241 aa17.28■□□□□ 0.36
NIPAL3-202ENST00000339255 RASEFQ8IZ41 740 aa17.28■□□□□ 0.36
NIPAL3-202ENST00000339255 TM6SF1Q9BZW5 370 aa17.28■□□□□ 0.36
NIPAL3-202ENST00000339255 USP40Q9NVE5 1235 aa17.28■□□□□ 0.36
NIPAL3-202ENST00000339255 TMOD2Q9NZR1 351 aa17.28■□□□□ 0.36
NIPAL3-202ENST00000339255 MKRN1Q9UHC7 482 aaKnown RBP17.28■□□□□ 0.36
NIPAL3-202ENST00000339255 FLT1P17948 1338 aa17.27■□□□□ 0.36
NIPAL3-202ENST00000339255 MYO1BO43795 1136 aa17.27■□□□□ 0.36
NIPAL3-202ENST00000339255 SBK1Q52WX2 424 aa17.27■□□□□ 0.36
NIPAL3-202ENST00000339255 TGFBRAP1Q8WUH2 860 aa17.27■□□□□ 0.36
NIPAL3-202ENST00000339255 MYOZ2Q9NPC6 264 aa17.27■□□□□ 0.36
NIPAL3-202ENST00000339255 ANAPC4Q9UJX5 808 aa17.27■□□□□ 0.36
NIPAL3-202ENST00000339255 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 WDHD1O75717 1129 aaPredicted RBP17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 PCP11498 1178 aaKnown RBP17.26■□□□□ 0.35
NIPAL3-202ENST00000339255 DPY19L2Q6NUT2 758 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms