RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 F8W031 263 aaPredicted RBP17.45■□□□□ 0.38
CBX3-201ENST00000337620 TMX3Q96JJ7 454 aa17.45■□□□□ 0.38
CBX3-201ENST00000337620 NOL10Q9BSC4 688 aaKnown RBP17.45■□□□□ 0.38
CBX3-201ENST00000337620 ZMYM6O95789 1325 aa17.44■□□□□ 0.38
CBX3-201ENST00000337620 CERS5Q8N5B7 392 aa17.44■□□□□ 0.38
CBX3-201ENST00000337620 CRNKL1Q9BZJ0 848 aaKnown RBP17.44■□□□□ 0.38
CBX3-201ENST00000337620 SPON1Q9HCB6 807 aa17.44■□□□□ 0.38
CBX3-201ENST00000337620 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
CBX3-201ENST00000337620 MROH7-TTC4A0A0A0MT08 1334 aa17.44■□□□□ 0.38
CBX3-201ENST00000337620 BAG3O95817 575 aa17.44■□□□□ 0.38
CBX3-201ENST00000337620 HMGB1P09429 215 aaKnown RBP17.44■□□□□ 0.38
CBX3-201ENST00000337620 SLF2Q8IX21 1173 aa17.44■□□□□ 0.38
CBX3-201ENST00000337620 BCS1LQ9Y276 419 aa17.43■□□□□ 0.38
CBX3-201ENST00000337620 SUGT1Q9Y2Z0 365 aa17.43■□□□□ 0.38
CBX3-201ENST00000337620 CTDSPL2Q05D32 466 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 STRIP1Q5VSL9 837 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 LARGE2Q8N3Y3 721 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 NBPF3Q9H094 633 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 TTF2Q9UNY4 1162 aaKnown RBP17.42■□□□□ 0.38
CBX3-201ENST00000337620 LIMCH1Q9UPQ0 1083 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 MYH2Q9UKX2 1941 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 USP17L3A6NCW0 530 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 USP17L4A6NCW7 530 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 BTDP43251 543 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 DHX32Q7L7V1 743 aaKnown RBP17.42■□□□□ 0.38
CBX3-201ENST00000337620 USP17L1Q7RTZ2 530 aa17.42■□□□□ 0.38
CBX3-201ENST00000337620 SH3RF3Q8TEJ3 882 aaPredicted RBP17.42■□□□□ 0.38
CBX3-201ENST00000337620 MINDY4BA8MYZ0 360 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 FGD1P98174 961 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 TRDNQ13061 729 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 RALYLQ86SE5 291 aaKnown RBP17.41■□□□□ 0.38
CBX3-201ENST00000337620 TBC1D10CQ8IV04 446 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 NLGN2Q8NFZ4 835 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 NCOA7Q8NI08 942 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 LRRC2Q9BYS8 371 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 PPP4CP60510 307 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 ANKRD1Q15327 319 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 Q6ZUG5 572 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 CHST3Q7LGC8 479 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 STK11IPQ8N1F8 1099 aa17.41■□□□□ 0.38
CBX3-201ENST00000337620 FAM163AQ96GL9 167 aaPredicted RBP17.41■□□□□ 0.38
CBX3-201ENST00000337620 GPR75-ASB3A0A0A6YYF3 556 aa17.4■□□□□ 0.38
CBX3-201ENST00000337620 USP5P45974 858 aa17.4■□□□□ 0.38
CBX3-201ENST00000337620 SCNN1DP51172 638 aa17.4■□□□□ 0.38
CBX3-201ENST00000337620 DACT2Q5SW24 774 aa17.4■□□□□ 0.38
CBX3-201ENST00000337620 GIMAP6Q6P9H5 292 aa17.4■□□□□ 0.38
CBX3-201ENST00000337620 ALDH8A1Q9H2A2 487 aaPredicted RBP17.4■□□□□ 0.38
CBX3-201ENST00000337620 DCP1AQ9NPI6 582 aaPredicted RBP17.4■□□□□ 0.38
CBX3-201ENST00000337620 ATP8A2Q9NTI2 1148 aa17.4■□□□□ 0.38
CBX3-201ENST00000337620 LAMA4Q16363 1823 aa17.4■□□□□ 0.38
CBX3-201ENST00000337620 YDJCA8MPS7 323 aa17.39■□□□□ 0.38
CBX3-201ENST00000337620 EXOSC10Q01780 885 aaKnown RBP17.39■□□□□ 0.38
CBX3-201ENST00000337620 PPARAQ07869 468 aa17.39■□□□□ 0.38
CBX3-201ENST00000337620 TOB2Q14106 344 aaPredicted RBP17.39■□□□□ 0.38
CBX3-201ENST00000337620 INCENPQ9NQS7 918 aa17.39■□□□□ 0.38
CBX3-201ENST00000337620 BRCA1P38398 1863 aaKnown RBP17.39■□□□□ 0.37
CBX3-201ENST00000337620 SCN9AQ15858 1988 aa17.39■□□□□ 0.37
CBX3-201ENST00000337620 KIAA0825Q8IV33 1275 aa17.39■□□□□ 0.37
CBX3-201ENST00000337620 VPS33BQ9H267 617 aa17.39■□□□□ 0.37
CBX3-201ENST00000337620 TAOK3Q9H2K8 898 aa17.39■□□□□ 0.37
CBX3-201ENST00000337620 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
CBX3-201ENST00000337620 GAKO14976 1311 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 CYP2D7A0A087X1C5 515 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 USP17L12C9JPN9 530 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 USP17L21D6R901 530 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 MCM5P33992 734 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 AKNAD1Q5T1N1 836 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 CTR9Q6PD62 1173 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 MFSD6Q6ZSS7 791 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 CERS3Q8IU89 383 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 TGFBRAP1Q8WUH2 860 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 TPCN1Q9ULQ1 816 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 PLCG2P16885 1265 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 IARSP41252 1262 aaKnown RBP17.38■□□□□ 0.37
CBX3-201ENST00000337620 FKBP1AP62942 108 aaKnown RBP17.38■□□□□ 0.37
CBX3-201ENST00000337620 CUL4AQ13619 759 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 MB21D2Q8IYB1 491 aaPredicted RBP17.38■□□□□ 0.37
CBX3-201ENST00000337620 TEX11Q8IYF3 940 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 ZSCAN31Q96LW9 406 aaPredicted RBP17.38■□□□□ 0.37
CBX3-201ENST00000337620 TOMM22Q9NS69 142 aa17.38■□□□□ 0.37
CBX3-201ENST00000337620 BAZ2AQ9UIF9 1905 aaKnown RBP17.37■□□□□ 0.37
CBX3-201ENST00000337620 NEDD4P46934 1319 aa17.37■□□□□ 0.37
CBX3-201ENST00000337620 B4E1Z4 1266 aa17.37■□□□□ 0.37
CBX3-201ENST00000337620 PRC1O43663 620 aa17.37■□□□□ 0.37
CBX3-201ENST00000337620 RAD17O75943 681 aa17.37■□□□□ 0.37
CBX3-201ENST00000337620 LARGE1O95461 756 aa17.37■□□□□ 0.37
CBX3-201ENST00000337620 NIM1KQ8IY84 436 aa17.37■□□□□ 0.37
CBX3-201ENST00000337620 BRF1Q92994 677 aa17.37■□□□□ 0.37
CBX3-201ENST00000337620 TEKT1Q969V4 418 aa17.37■□□□□ 0.37
CBX3-201ENST00000337620 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
CBX3-201ENST00000337620 SMIM22K7EJ46 135 aa17.36■□□□□ 0.37
CBX3-201ENST00000337620 ME3Q16798 604 aa17.36■□□□□ 0.37
CBX3-201ENST00000337620 RRP12Q5JTH9 1297 aaKnown RBP17.36■□□□□ 0.37
CBX3-201ENST00000337620 TACC3Q9Y6A5 838 aa17.36■□□□□ 0.37
CBX3-201ENST00000337620 SLC4A8Q2Y0W8 1093 aa17.36■□□□□ 0.37
CBX3-201ENST00000337620 MAPKAPK5Q8IW41 473 aa17.36■□□□□ 0.37
CBX3-201ENST00000337620 STAG1Q8WVM7 1258 aa17.36■□□□□ 0.37
CBX3-201ENST00000337620 RNF41Q9H4P4 317 aaPredicted RBP17.36■□□□□ 0.37
CBX3-201ENST00000337620 CNNM2Q9H8M5 875 aa17.36■□□□□ 0.37
CBX3-201ENST00000337620 SH2B1Q9NRF2 756 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms