RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 CPLX2Q6PUV4 134 aaKnown RBP27.14■■□□□ 1.94
NDEL1-201ENST00000334527 SPATA5Q8NB90 893 aa27.14■■□□□ 1.94
NDEL1-201ENST00000334527 PHKBQ93100 1093 aa27.14■■□□□ 1.93
NDEL1-201ENST00000334527 ARID3AQ99856 593 aa27.14■■□□□ 1.93
NDEL1-201ENST00000334527 BCL2L12Q9HB09 334 aa27.14■■□□□ 1.93
NDEL1-201ENST00000334527 NFXL1Q6ZNB6 911 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 IGDCC4Q8TDY8 1250 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 ARAP2Q8WZ64 1704 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 ZBTB43O43298 467 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 NEMFO60524 1076 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 SLC3A2P08195 630 aaKnown RBP27.13■■□□□ 1.93
NDEL1-201ENST00000334527 PFKFB1P16118 471 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 CMA1P23946 247 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 KRT40Q6A162 431 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 VPS37DQ86XT2 251 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 INCENPQ9NQS7 918 aa27.13■■□□□ 1.93
NDEL1-201ENST00000334527 EXOC5O00471 708 aa27.12■■□□□ 1.93
NDEL1-201ENST00000334527 SLC5A1P13866 664 aa27.12■■□□□ 1.93
NDEL1-201ENST00000334527 SLC39A14Q15043 492 aa27.12■■□□□ 1.93
NDEL1-201ENST00000334527 ALX1Q15699 326 aa27.12■■□□□ 1.93
NDEL1-201ENST00000334527 FILIP1Q7Z7B0 1213 aa27.12■■□□□ 1.93
NDEL1-201ENST00000334527 MARCKSP29966 332 aaPredicted RBP27.12■■□□□ 1.93
NDEL1-201ENST00000334527 TPD52L1Q16890 204 aaPredicted RBP27.12■■□□□ 1.93
NDEL1-201ENST00000334527 MAGEB6Q8N7X4 407 aa27.12■■□□□ 1.93
NDEL1-201ENST00000334527 LY9Q9HBG7 655 aa27.12■■□□□ 1.93
NDEL1-201ENST00000334527 SLIT2O94813 1529 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 PATL2C9JE40 543 aaKnown RBP27.11■■□□□ 1.93
NDEL1-201ENST00000334527 WDHD1O75717 1129 aaPredicted RBP27.11■■□□□ 1.93
NDEL1-201ENST00000334527 TNNT1P13805 278 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 GNL2Q13823 731 aaKnown RBP27.11■■□□□ 1.93
NDEL1-201ENST00000334527 RASGRF1Q13972 1273 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 TMEM67Q5HYA8 995 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 EPB41L4AQ9HCS5 686 aaPredicted RBP27.11■■□□□ 1.93
NDEL1-201ENST00000334527 MROH7-TTC4A0A0A0MT08 1334 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 MBD4O95243 580 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 MAP3K12Q12852 859 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 IFNL3Q8IZI9 196 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 BPIFA3Q9BQP9 254 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 MYL10Q9BUA6 226 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 NAPBQ9H115 298 aa27.11■■□□□ 1.93
NDEL1-201ENST00000334527 GOLGA8AA7E2F4 631 aa27.1■■□□□ 1.93
NDEL1-201ENST00000334527 SNAP23O00161 211 aa27.1■■□□□ 1.93
NDEL1-201ENST00000334527 BIN1O00499 593 aa27.1■■□□□ 1.93
NDEL1-201ENST00000334527 ECM29Q5VYK3 1845 aa27.1■■□□□ 1.93
NDEL1-201ENST00000334527 CTDSPL2Q05D32 466 aa27.09■■□□□ 1.93
NDEL1-201ENST00000334527 AK7Q96M32 723 aa27.09■■□□□ 1.93
NDEL1-201ENST00000334527 IARSP41252 1262 aaKnown RBP27.09■■□□□ 1.93
NDEL1-201ENST00000334527 SUSD4Q5VX71 490 aa27.09■■□□□ 1.93
NDEL1-201ENST00000334527 SGMS1Q86VZ5 419 aa27.09■■□□□ 1.93
NDEL1-201ENST00000334527 MPHOSPH8Q99549 860 aa27.09■■□□□ 1.93
NDEL1-201ENST00000334527 CCDC69A6NI79 296 aa27.08■■□□□ 1.93
NDEL1-201ENST00000334527 SKILP12757 684 aa27.08■■□□□ 1.93
NDEL1-201ENST00000334527 NLRP12P59046 1061 aa27.08■■□□□ 1.93
NDEL1-201ENST00000334527 RBM6P78332 1123 aaKnown RBP27.08■■□□□ 1.93
NDEL1-201ENST00000334527 NTRK3Q16288 839 aa27.08■■□□□ 1.93
NDEL1-201ENST00000334527 ARMT1Q9H993 441 aa27.08■■□□□ 1.93
NDEL1-201ENST00000334527 RANBP6O60518 1105 aaKnown RBP27.08■■□□□ 1.93
NDEL1-201ENST00000334527 TRIM29Q14134 588 aa27.08■■□□□ 1.93
NDEL1-201ENST00000334527 FAM217BQ9NTX9 383 aaPredicted RBP27.08■■□□□ 1.93
NDEL1-201ENST00000334527 ZSWIM5Q9P217 1185 aa27.08■■□□□ 1.93
NDEL1-201ENST00000334527 COL14A1Q05707 1796 aaKnown RBP27.08■■□□□ 1.93
NDEL1-201ENST00000334527 DOCK2Q92608 1830 aa27.07■■□□□ 1.92
NDEL1-201ENST00000334527 CTIFO43310 598 aaKnown RBP27.07■■□□□ 1.92
NDEL1-201ENST00000334527 SEC31BQ9NQW1 1179 aa27.07■■□□□ 1.92
NDEL1-201ENST00000334527 SLC12A7Q9Y666 1083 aa27.07■■□□□ 1.92
NDEL1-201ENST00000334527 CHD4Q14839 1912 aa27.07■■□□□ 1.92
NDEL1-201ENST00000334527 SMTNL1A8MU46 457 aa27.06■■□□□ 1.92
NDEL1-201ENST00000334527 IFIT3O14879 490 aaKnown RBP27.06■■□□□ 1.92
NDEL1-201ENST00000334527 LIFRP42702 1097 aa27.06■■□□□ 1.92
NDEL1-201ENST00000334527 SYKP43405 635 aa27.06■■□□□ 1.92
NDEL1-201ENST00000334527 PPP6R2O75170 966 aa27.06■■□□□ 1.92
NDEL1-201ENST00000334527 CCZ1BP86790 482 aa27.06■■□□□ 1.92
NDEL1-201ENST00000334527 CCZ1P86791 482 aaPredicted RBP27.06■■□□□ 1.92
NDEL1-201ENST00000334527 PTPAQ15257 358 aa27.06■■□□□ 1.92
NDEL1-201ENST00000334527 NBPF11Q86T75 865 aa27.06■■□□□ 1.92
NDEL1-201ENST00000334527 JMYQ8N9B5 988 aa27.06■■□□□ 1.92
NDEL1-201ENST00000334527 PLCH1Q4KWH8 1693 aa27.05■■□□□ 1.92
NDEL1-201ENST00000334527 EIF5P55010 431 aaKnown RBP27.05■■□□□ 1.92
NDEL1-201ENST00000334527 CNNM2Q9H8M5 875 aa27.05■■□□□ 1.92
NDEL1-201ENST00000334527 TACC3Q9Y6A5 838 aa27.05■■□□□ 1.92
NDEL1-201ENST00000334527 U2AF2P26368 475 aaKnown RBP eCLIP27.05■■□□□ 1.927e-10■■□□□ 13.7
NDEL1-201ENST00000334527 TIGD1Q96MW7 591 aa27.05■■□□□ 1.92
NDEL1-201ENST00000334527 MAP3K14Q99558 947 aa27.05■■□□□ 1.92
NDEL1-201ENST00000334527 UTP14AQ9BVJ6 771 aaKnown RBP27.05■■□□□ 1.92
NDEL1-201ENST00000334527 SLC26A6Q9BXS9 759 aa27.05■■□□□ 1.92
NDEL1-201ENST00000334527 DOT1LQ8TEK3 1739 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 USP27XA6NNY8 438 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 GSG1L2A8MUP6 293 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 AKNAD1Q5T1N1 836 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 SHC4Q6S5L8 630 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 CCDC94Q9BW85 323 aaPredicted RBP27.04■■□□□ 1.92
NDEL1-201ENST00000334527 HPSEQ9Y251 543 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 PAXBP1Q9Y5B6 917 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 UBE2Q2LH0YL09 131 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 SMC2O95347 1197 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 GSDMDP57764 484 aa27.04■■□□□ 1.92
NDEL1-201ENST00000334527 SSRP1Q08945 709 aaKnown RBP27.04■■□□□ 1.92
NDEL1-201ENST00000334527 PRKAB2O43741 272 aa27.03■■□□□ 1.92
NDEL1-201ENST00000334527 TPM4P67936 248 aa27.03■■□□□ 1.92
NDEL1-201ENST00000334527 MFSD6Q6ZSS7 791 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms