RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 KCNA1Q09470 495 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 FAM227BQ96M60 508 aa12.41□□□□□ -0.42
AP1S3-201ENST00000334271 IRS2Q9Y4H2 1338 aa12.4□□□□□ -0.42
AP1S3-201ENST00000334271 ANKRD1Q15327 319 aa12.4□□□□□ -0.42
AP1S3-201ENST00000334271 MASTLQ96GX5 879 aa12.4□□□□□ -0.42
AP1S3-201ENST00000334271 CYP2E1P05181 493 aaPredicted RBP12.39□□□□□ -0.43
AP1S3-201ENST00000334271 ALX1Q15699 326 aa12.39□□□□□ -0.43
AP1S3-201ENST00000334271 TMX4Q9H1E5 349 aaPredicted RBP12.39□□□□□ -0.43
AP1S3-201ENST00000334271 FRMD4BQ9Y2L6 1034 aa12.39□□□□□ -0.43
AP1S3-201ENST00000334271 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
AP1S3-201ENST00000334271 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
AP1S3-201ENST00000334271 HIBADHP31937 336 aaKnown RBP12.39□□□□□ -0.43
AP1S3-201ENST00000334271 WASHC4Q2M389 1173 aa12.39□□□□□ -0.43
AP1S3-201ENST00000334271 ZNF804AQ7Z570 1209 aa12.39□□□□□ -0.43
AP1S3-201ENST00000334271 VPS37DQ86XT2 251 aa12.39□□□□□ -0.43
AP1S3-201ENST00000334271 INTS4Q96HW7 963 aaKnown RBP12.39□□□□□ -0.43
AP1S3-201ENST00000334271 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
AP1S3-201ENST00000334271 SNX14Q9Y5W7 946 aa12.39□□□□□ -0.43
AP1S3-201ENST00000334271 MSH5O43196 834 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
AP1S3-201ENST00000334271 SRGNP10124 158 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 RASGRF1Q13972 1273 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 EZH2Q15910 746 aaKnown RBP12.38□□□□□ -0.43
AP1S3-201ENST00000334271 VPS53Q5VIR6 699 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 CREB3L3Q68CJ9 461 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
AP1S3-201ENST00000334271 ZSCAN31Q96LW9 406 aaPredicted RBP12.38□□□□□ -0.43
AP1S3-201ENST00000334271 FAM117AQ9C073 453 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 ATP6V0A2Q9Y487 856 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 COL4A1P02462 1669 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 KIF13BQ9NQT8 1826 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 MMP10P09238 476 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 ZNF513Q8N8E2 541 aaPredicted RBP12.38□□□□□ -0.43
AP1S3-201ENST00000334271 HELBQ8NG08 1087 aaPredicted RBP12.38□□□□□ -0.43
AP1S3-201ENST00000334271 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 MRRFQ96E11 262 aaKnown RBP12.38□□□□□ -0.43
AP1S3-201ENST00000334271 SPOCK3Q9BQ16 436 aa12.38□□□□□ -0.43
AP1S3-201ENST00000334271 LAMA4Q16363 1823 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 MAST3O60307 1309 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 WDR19Q8NEZ3 1342 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 TAF1P21675 1872 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 PTH1RQ03431 593 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
AP1S3-201ENST00000334271 SCARF1Q14162 830 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 IL25Q9H293 177 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 FEZ2Q9UHY8 353 aaPredicted RBP12.37□□□□□ -0.43
AP1S3-201ENST00000334271 GGA1Q9UJY5 639 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 CYP46A1Q9Y6A2 500 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 TCRBV5S4A2TA0A5A2 114 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 VGLL3A8MV65 326 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 SLC27A2O14975 620 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 ZNF500O60304 480 aaPredicted RBP12.37□□□□□ -0.43
AP1S3-201ENST00000334271 PDE6AP16499 860 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 TSR1Q2NL82 804 aaKnown RBP12.37□□□□□ -0.43
AP1S3-201ENST00000334271 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 ARHGEF10LQ9HCE6 1279 aa12.37□□□□□ -0.43
AP1S3-201ENST00000334271 CCDC194A0A1B0GVG4 234 aa12.36□□□□□ -0.43
AP1S3-201ENST00000334271 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
AP1S3-201ENST00000334271 NEK4P51957 841 aa12.36□□□□□ -0.43
AP1S3-201ENST00000334271 MTA1Q13330 715 aa12.36□□□□□ -0.43
AP1S3-201ENST00000334271 ANKRD23Q86SG2 305 aa12.36□□□□□ -0.43
AP1S3-201ENST00000334271 TDRD7Q8NHU6 1098 aaKnown RBP12.36□□□□□ -0.43
AP1S3-201ENST00000334271 EDC3Q96F86 508 aaKnown RBP12.36□□□□□ -0.43
AP1S3-201ENST00000334271 SH2B1Q9NRF2 756 aaPredicted RBP12.36□□□□□ -0.43
AP1S3-201ENST00000334271 ANKIB1Q9P2G1 1089 aa12.36□□□□□ -0.43
AP1S3-201ENST00000334271 PPEF1O14829 653 aaPredicted RBP12.35□□□□□ -0.43
AP1S3-201ENST00000334271 HSPD1P10809 573 aaKnown RBP12.35□□□□□ -0.43
AP1S3-201ENST00000334271 IL1R1P14778 569 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 BCAMP50895 628 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 CUL4AQ13619 759 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 RUFY3Q7L099 469 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 ZNF589Q86UQ0 364 aaPredicted RBP12.35□□□□□ -0.43
AP1S3-201ENST00000334271 TBC1D22AQ8WUA7 517 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 TTC14Q96N46 770 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 PIH1D3Q9NQM4 214 aaKnown RBP12.35□□□□□ -0.43
AP1S3-201ENST00000334271 CHMP5Q9NZZ3 219 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 C10orf71Q711Q0 1435 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 COL11A2P13942 1736 aaPredicted RBP12.35□□□□□ -0.43
AP1S3-201ENST00000334271 H0YIN7 160 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 ZRANB2O95218 330 aaKnown RBP eCLIP12.35□□□□□ -0.43
AP1S3-201ENST00000334271 PCP11498 1178 aaKnown RBP12.35□□□□□ -0.43
AP1S3-201ENST00000334271 GSTO1P78417 241 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 OSBP2Q969R2 916 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 EYA3Q99504 573 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 VPS33BQ9H267 617 aa12.35□□□□□ -0.43
AP1S3-201ENST00000334271 RBM47A0AV96 593 aaKnown RBP12.34□□□□□ -0.43
AP1S3-201ENST00000334271 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
AP1S3-201ENST00000334271 PRPF40BQ6NWY9 871 aaKnown RBP12.34□□□□□ -0.43
AP1S3-201ENST00000334271 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
AP1S3-201ENST00000334271 LRP2BPQ9P2M1 347 aa12.34□□□□□ -0.43
AP1S3-201ENST00000334271 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
AP1S3-201ENST00000334271 IDH1O75874 414 aaKnown RBP12.34□□□□□ -0.43
AP1S3-201ENST00000334271 DDIT3P35638 169 aa12.34□□□□□ -0.43
AP1S3-201ENST00000334271 FKBP1AP62942 108 aaKnown RBP12.34□□□□□ -0.43
AP1S3-201ENST00000334271 BLOC1S2Q6QNY1 142 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms