RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RUFY3Q7L099 469 aa27.68■■■□□ 2.02
TSEN54-201ENST00000333213 FHDC1Q9C0D6 1143 aaPredicted RBP27.68■■■□□ 2.02
TSEN54-201ENST00000333213 SUGT1Q9Y2Z0 365 aa27.68■■■□□ 2.02
TSEN54-201ENST00000333213 E7EWF7 191 aa27.67■■■□□ 2.02
TSEN54-201ENST00000333213 FAM163AQ96GL9 167 aaPredicted RBP27.67■■■□□ 2.02
TSEN54-201ENST00000333213 K7ELQ4 463 aaPredicted RBP27.67■■■□□ 2.02
TSEN54-201ENST00000333213 KRT32Q14532 448 aa27.67■■■□□ 2.02
TSEN54-201ENST00000333213 LARGE2Q8N3Y3 721 aa27.67■■■□□ 2.02
TSEN54-201ENST00000333213 NEK1Q96PY6 1258 aa27.67■■■□□ 2.02
TSEN54-201ENST00000333213 NAPBQ9H115 298 aa27.67■■■□□ 2.02
TSEN54-201ENST00000333213 GAKO14976 1311 aa27.66■■■□□ 2.02
TSEN54-201ENST00000333213 USP17L3A6NCW0 530 aa27.66■■■□□ 2.02
TSEN54-201ENST00000333213 USP17L4A6NCW7 530 aa27.66■■■□□ 2.02
TSEN54-201ENST00000333213 ZNF213O14771 459 aa27.66■■■□□ 2.02
TSEN54-201ENST00000333213 PPP4CP60510 307 aa27.66■■■□□ 2.02
TSEN54-201ENST00000333213 USP17L1Q7RTZ2 530 aa27.66■■■□□ 2.02
TSEN54-201ENST00000333213 VPS33BQ9H267 617 aa27.65■■■□□ 2.02
TSEN54-201ENST00000333213 TAOK3Q9H2K8 898 aa27.65■■■□□ 2.02
TSEN54-201ENST00000333213 TTF2Q9UNY4 1162 aaKnown RBP27.65■■■□□ 2.02
TSEN54-201ENST00000333213 CYP46A1Q9Y6A2 500 aa27.65■■■□□ 2.02
TSEN54-201ENST00000333213 GPR75-ASB3A0A0A6YYF3 556 aa27.65■■■□□ 2.02
TSEN54-201ENST00000333213 LDHCP07864 332 aa27.65■■■□□ 2.02
TSEN54-201ENST00000333213 PSMA5P28066 241 aa27.65■■■□□ 2.02
TSEN54-201ENST00000333213 IARSP41252 1262 aaKnown RBP27.65■■■□□ 2.02
TSEN54-201ENST00000333213 SH3RF3Q8TEJ3 882 aaPredicted RBP27.65■■■□□ 2.02
TSEN54-201ENST00000333213 TCEANC2Q96MN5 208 aa27.65■■■□□ 2.02
TSEN54-201ENST00000333213 FKBP1AP62942 108 aaKnown RBP27.64■■■□□ 2.02
TSEN54-201ENST00000333213 BLOC1S2Q6QNY1 142 aa27.64■■■□□ 2.02
TSEN54-201ENST00000333213 TBC1D10CQ8IV04 446 aa27.64■■■□□ 2.02
TSEN54-201ENST00000333213 LAMA4Q16363 1823 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 SMIM22K7EJ46 135 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 RPS6KB1P23443 525 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 BTDP43251 543 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 TDO2P48775 406 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 AK2P54819 239 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 NKX2-3Q8TAU0 364 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 NACAP1Q9BZK3 213 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 DAGLAQ9Y4D2 1042 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 TACC3Q9Y6A5 838 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 SCNN1DP51172 638 aa27.63■■■□□ 2.01
TSEN54-201ENST00000333213 PRELPP51888 382 aa27.62■■■□□ 2.01
TSEN54-201ENST00000333213 GSE1Q14687 1217 aa27.62■■■□□ 2.01
TSEN54-201ENST00000333213 KIAA0825Q8IV33 1275 aa27.62■■■□□ 2.01
TSEN54-201ENST00000333213 SPRYD3Q8NCJ5 442 aa27.62■■■□□ 2.01
TSEN54-201ENST00000333213 LARP6Q9BRS8 491 aaKnown RBP27.62■■■□□ 2.01
TSEN54-201ENST00000333213 DCP1AQ9NPI6 582 aaPredicted RBP27.62■■■□□ 2.01
TSEN54-201ENST00000333213 PDRG1Q9NUG6 133 aa27.62■■■□□ 2.01
TSEN54-201ENST00000333213 ADAMTSL1Q8N6G6 1762 aa27.62■■■□□ 2.01
TSEN54-201ENST00000333213 ARFGEF1Q9Y6D6 1849 aa27.62■■■□□ 2.01
TSEN54-201ENST00000333213 BAG3O95817 575 aa27.61■■■□□ 2.01
TSEN54-201ENST00000333213 NOL8Q76FK4 1167 aaKnown RBP27.61■■■□□ 2.01
TSEN54-201ENST00000333213 CRNKL1Q9BZJ0 848 aaKnown RBP27.61■■■□□ 2.01
TSEN54-201ENST00000333213 INCENPQ9NQS7 918 aa27.61■■■□□ 2.01
TSEN54-201ENST00000333213 MKRN1Q9UHC7 482 aaKnown RBP27.61■■■□□ 2.01
TSEN54-201ENST00000333213 PSME4Q14997 1843 aa27.61■■■□□ 2.01
TSEN54-201ENST00000333213 BAZ2AQ9UIF9 1905 aaKnown RBP27.61■■■□□ 2.01
TSEN54-201ENST00000333213 RHBDL3P58872 404 aa27.61■■■□□ 2.01
TSEN54-201ENST00000333213 RAD17O75943 681 aa27.6■■■□□ 2.01
TSEN54-201ENST00000333213 EVX2Q03828 476 aa27.6■■■□□ 2.01
TSEN54-201ENST00000333213 CTDSPL2Q05D32 466 aa27.6■■■□□ 2.01
TSEN54-201ENST00000333213 SLF2Q8IX21 1173 aa27.6■■■□□ 2.01
TSEN54-201ENST00000333213 RASSF7Q02833 373 aa27.59■■■□□ 2.01
TSEN54-201ENST00000333213 GIMAP6Q6P9H5 292 aa27.59■■■□□ 2.01
TSEN54-201ENST00000333213 IL27Q8NEV9 243 aa27.59■■■□□ 2.01
TSEN54-201ENST00000333213 ATP8A2Q9NTI2 1148 aa27.59■■■□□ 2.01
TSEN54-201ENST00000333213 CYP2D7A0A087X1C5 515 aa27.59■■■□□ 2.01
TSEN54-201ENST00000333213 CTR9Q6PD62 1173 aa27.59■■■□□ 2.01
TSEN54-201ENST00000333213 TMX3Q96JJ7 454 aa27.59■■■□□ 2.01
TSEN54-201ENST00000333213 SYT17Q9BSW7 474 aa27.59■■■□□ 2.01
TSEN54-201ENST00000333213 ZNRF3Q9ULT6 936 aa27.59■■■□□ 2.01
TSEN54-201ENST00000333213 MCM2P49736 904 aa27.58■■■□□ 2.01
TSEN54-201ENST00000333213 EXOSC10Q01780 885 aaKnown RBP27.58■■■□□ 2.01
TSEN54-201ENST00000333213 PCDHAC2Q9Y5I4 1007 aa27.58■■■□□ 2.01
TSEN54-201ENST00000333213 LTBP3Q9NS15 1303 aa27.58■■■□□ 2.01
TSEN54-201ENST00000333213 PSMD14O00487 310 aa27.57■■■□□ 2
TSEN54-201ENST00000333213 DHX32Q7L7V1 743 aaKnown RBP27.57■■■□□ 2
TSEN54-201ENST00000333213 NIM1KQ8IY84 436 aa27.57■■■□□ 2
TSEN54-201ENST00000333213 USP17L12C9JPN9 530 aa27.57■■■□□ 2
TSEN54-201ENST00000333213 USP17L21D6R901 530 aa27.57■■■□□ 2
TSEN54-201ENST00000333213 VIL1P09327 827 aaKnown RBP27.57■■■□□ 2
TSEN54-201ENST00000333213 PPARAQ07869 468 aa27.57■■■□□ 2
TSEN54-201ENST00000333213 TOB2Q14106 344 aaPredicted RBP27.57■■■□□ 2
TSEN54-201ENST00000333213 HHIPL2Q6UWX4 724 aa27.57■■■□□ 2
TSEN54-201ENST00000333213 TGFBRAP1Q8WUH2 860 aa27.57■■■□□ 2
TSEN54-201ENST00000333213 NOL10Q9BSC4 688 aaKnown RBP27.57■■■□□ 2
TSEN54-201ENST00000333213 LRRC2Q9BYS8 371 aa27.57■■■□□ 2
TSEN54-201ENST00000333213 CDK5RAP2Q96SN8 1893 aa27.56■■■□□ 2
TSEN54-201ENST00000333213 TIAM2Q8IVF5 1701 aa27.56■■■□□ 2
TSEN54-201ENST00000333213 MINDY4BA8MYZ0 360 aa27.56■■■□□ 2
TSEN54-201ENST00000333213 HMGB1P09429 215 aaKnown RBP27.56■■■□□ 2
TSEN54-201ENST00000333213 CRKP46108 304 aa27.56■■■□□ 2
TSEN54-201ENST00000333213 APOBEC3HQ6NTF7 200 aaKnown RBP27.56■■■□□ 2
TSEN54-201ENST00000333213 CHST3Q7LGC8 479 aa27.56■■■□□ 2
TSEN54-201ENST00000333213 MB21D2Q8IYB1 491 aaPredicted RBP27.56■■■□□ 2
TSEN54-201ENST00000333213 ALDH8A1Q9H2A2 487 aaPredicted RBP27.56■■■□□ 2
TSEN54-201ENST00000333213 NEDD4P46934 1319 aa27.56■■■□□ 2
TSEN54-201ENST00000333213 TEKT1Q969V4 418 aa27.55■■■□□ 2
TSEN54-201ENST00000333213 ANAPC4Q9UJX5 808 aa27.55■■■□□ 2
TSEN54-201ENST00000333213 CXCL9Q07325 125 aa27.55■■■□□ 2
TSEN54-201ENST00000333213 RSBN1LQ6PCB5 846 aaPredicted RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms