RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 AOX1Q06278 1338 aa24.89■■□□□ 1.58
MRPL40-201ENST00000333130 GLRX3O76003 335 aaKnown RBP24.89■■□□□ 1.57
MRPL40-201ENST00000333130 PDE4AP27815 886 aa24.89■■□□□ 1.57
MRPL40-201ENST00000333130 TSHZ3Q63HK5 1081 aa24.89■■□□□ 1.57
MRPL40-201ENST00000333130 OSBPL3Q9H4L5 887 aa24.89■■□□□ 1.57
MRPL40-201ENST00000333130 NDUFB9Q9Y6M9 179 aa24.89■■□□□ 1.57
MRPL40-201ENST00000333130 TRAF5O00463 557 aa24.88■■□□□ 1.57
MRPL40-201ENST00000333130 NF2P35240 595 aa24.88■■□□□ 1.57
MRPL40-201ENST00000333130 APOBEC3HQ6NTF7 200 aaKnown RBP24.88■■□□□ 1.57
MRPL40-201ENST00000333130 PLEKHM2Q8IWE5 1019 aa24.88■■□□□ 1.57
MRPL40-201ENST00000333130 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.88■■□□□ 1.57
MRPL40-201ENST00000333130 ZNF408Q9H9D4 720 aa24.87■■□□□ 1.57
MRPL40-201ENST00000333130 AK9Q5TCS8 1911 aa24.87■■□□□ 1.57
MRPL40-201ENST00000333130 TMEM88BA6NKF7 163 aa24.86■■□□□ 1.57
MRPL40-201ENST00000333130 CELF2O95319 508 aaKnown RBP24.86■■□□□ 1.57
MRPL40-201ENST00000333130 BAG3O95817 575 aa24.86■■□□□ 1.57
MRPL40-201ENST00000333130 MAP4K4O95819 1239 aaPredicted RBP24.86■■□□□ 1.57
MRPL40-201ENST00000333130 BTDP43251 543 aa24.86■■□□□ 1.57
MRPL40-201ENST00000333130 FKBP1CQ5VVH2 108 aa24.86■■□□□ 1.57
MRPL40-201ENST00000333130 CERS3Q8IU89 383 aa24.86■■□□□ 1.57
MRPL40-201ENST00000333130 DEFB129Q9H1M3 183 aa24.86■■□□□ 1.57
MRPL40-201ENST00000333130 ANTXR1Q9H6X2 564 aa24.86■■□□□ 1.57
MRPL40-201ENST00000333130 PLCG2P16885 1265 aa24.85■■□□□ 1.57
MRPL40-201ENST00000333130 CDCA5Q96FF9 252 aa24.85■■□□□ 1.57
MRPL40-201ENST00000333130 CREBZFQ9NS37 354 aa24.85■■□□□ 1.57
MRPL40-201ENST00000333130 USP40Q9NVE5 1235 aa24.85■■□□□ 1.57
MRPL40-201ENST00000333130 GPR75-ASB3A0A0A6YYF3 556 aa24.84■■□□□ 1.57
MRPL40-201ENST00000333130 TCP10L2B9ZVM9 353 aa24.84■■□□□ 1.57
MRPL40-201ENST00000333130 LRRFIP1Q32MZ4 808 aaKnown RBP24.84■■□□□ 1.57
MRPL40-201ENST00000333130 ZSCAN25Q6NSZ9 544 aa24.84■■□□□ 1.57
MRPL40-201ENST00000333130 CDC42EP5Q6NZY7 148 aa24.84■■□□□ 1.57
MRPL40-201ENST00000333130 MAGEB6Q8N7X4 407 aa24.84■■□□□ 1.57
MRPL40-201ENST00000333130 CYP7A1P22680 504 aa24.83■■□□□ 1.57
MRPL40-201ENST00000333130 RASA3Q14644 834 aa24.82■■□□□ 1.56
MRPL40-201ENST00000333130 SLC9C2Q5TAH2 1124 aa24.82■■□□□ 1.56
MRPL40-201ENST00000333130 FAM83AQ86UY5 434 aa24.82■■□□□ 1.56
MRPL40-201ENST00000333130 ZNF384Q8TF68 577 aa24.82■■□□□ 1.56
MRPL40-201ENST00000333130 SCAF8Q9UPN6 1271 aaKnown RBP24.82■■□□□ 1.56
MRPL40-201ENST00000333130 SUPT20HL1Q3ZLR7 823 aa24.81■■□□□ 1.56
MRPL40-201ENST00000333130 C2orf69Q8N8R5 385 aa24.81■■□□□ 1.56
MRPL40-201ENST00000333130 EDC3Q96F86 508 aaKnown RBP24.81■■□□□ 1.56
MRPL40-201ENST00000333130 ABT1Q9ULW3 272 aaKnown RBP24.81■■□□□ 1.56
MRPL40-201ENST00000333130 PDE6AP16499 860 aa24.8■■□□□ 1.56
MRPL40-201ENST00000333130 CACNB3P54284 484 aa24.8■■□□□ 1.56
MRPL40-201ENST00000333130 HOOK2Q96ED9 719 aa24.8■■□□□ 1.56
MRPL40-201ENST00000333130 AATFQ9NY61 560 aaKnown RBP eCLIP24.8■■□□□ 1.56
MRPL40-201ENST00000333130 PAPPA2Q9BXP8 1791 aa24.8■■□□□ 1.56
MRPL40-201ENST00000333130 FMR1Q06787 632 aaKnown RBP eCLIP24.8■■□□□ 1.56
MRPL40-201ENST00000333130 GBA2Q9HCG7 927 aaPredicted RBP24.8■■□□□ 1.56
MRPL40-201ENST00000333130 RPAP1Q9BWH6 1393 aaPredicted RBP24.79■■□□□ 1.56
MRPL40-201ENST00000333130 CDK5RAP2Q96SN8 1893 aa24.79■■□□□ 1.56
MRPL40-201ENST00000333130 FKBP1BP68106 108 aa24.79■■□□□ 1.56
MRPL40-201ENST00000333130 KBTBD3Q8NAB2 608 aa24.79■■□□□ 1.56
MRPL40-201ENST00000333130 FOCADQ5VW36 1801 aa24.79■■□□□ 1.56
MRPL40-201ENST00000333130 PPP4CP60510 307 aa24.78■■□□□ 1.56
MRPL40-201ENST00000333130 TTLL12Q14166 644 aaPredicted RBP24.78■■□□□ 1.56
MRPL40-201ENST00000333130 CST9Q5W186 159 aa24.78■■□□□ 1.56
MRPL40-201ENST00000333130 TEX11Q8IYF3 940 aa24.78■■□□□ 1.56
MRPL40-201ENST00000333130 IDI2Q9BXS1 227 aa24.78■■□□□ 1.56
MRPL40-201ENST00000333130 ZNF532Q9HCE3 1301 aa24.77■■□□□ 1.56
MRPL40-201ENST00000333130 ENTPD3O75355 529 aa24.77■■□□□ 1.56
MRPL40-201ENST00000333130 ZFYP08048 801 aaPredicted RBP24.77■■□□□ 1.56
MRPL40-201ENST00000333130 PRAMEF18Q5VWM3 479 aa24.77■■□□□ 1.56
MRPL40-201ENST00000333130 DLK2Q6UY11 383 aa24.77■■□□□ 1.56
MRPL40-201ENST00000333130 FAM151AQ8WW52 585 aa24.77■■□□□ 1.56
MRPL40-201ENST00000333130 TMEM39BQ9GZU3 492 aa24.77■■□□□ 1.56
MRPL40-201ENST00000333130 PPP1R12BO60237 982 aaPredicted RBP24.76■■□□□ 1.55
MRPL40-201ENST00000333130 ADD2P35612 726 aa24.76■■□□□ 1.55
MRPL40-201ENST00000333130 RGS3P49796 1198 aa24.76■■□□□ 1.55
MRPL40-201ENST00000333130 RHBDL3P58872 404 aa24.76■■□□□ 1.55
MRPL40-201ENST00000333130 TCP10Q12799 353 aa24.76■■□□□ 1.55
MRPL40-201ENST00000333130 ARMC9Q7Z3E5 817 aa24.76■■□□□ 1.55
MRPL40-201ENST00000333130 SKAP1Q86WV1 359 aa24.76■■□□□ 1.55
MRPL40-201ENST00000333130 FSD1Q9BTV5 496 aa24.76■■□□□ 1.55
MRPL40-201ENST00000333130 CNTNAP1P78357 1384 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 MAGEB6P1A0A0J9YX57 407 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 NPM3O75607 178 aaKnown RBP24.75■■□□□ 1.55
MRPL40-201ENST00000333130 NFIAQ12857 509 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 PICALMQ13492 652 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 UBE3CQ15386 1083 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 TTC22Q5TAA0 569 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 ADGRA1Q86SQ6 560 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 MIGA1Q8NAN2 632 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 EVI5LQ96CN4 794 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 GTF3C3Q9Y5Q9 886 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 TLL2Q9Y6L7 1015 aa24.75■■□□□ 1.55
MRPL40-201ENST00000333130 ZSCAN29Q8IWY8 852 aaPredicted RBP24.74■■□□□ 1.55
MRPL40-201ENST00000333130 SH3RF3Q8TEJ3 882 aaPredicted RBP24.74■■□□□ 1.55
MRPL40-201ENST00000333130 RFX7Q2KHR2 1363 aa24.74■■□□□ 1.55
MRPL40-201ENST00000333130 TRIM6-TRIM34B2RNG4 842 aa24.73■■□□□ 1.55
MRPL40-201ENST00000333130 WDHD1O75717 1129 aaPredicted RBP24.73■■□□□ 1.55
MRPL40-201ENST00000333130 GSPT1P15170 499 aaKnown RBP24.73■■□□□ 1.55
MRPL40-201ENST00000333130 NBPF12Q5TAG4 269 aaPredicted RBP24.73■■□□□ 1.55
MRPL40-201ENST00000333130 DCAF15Q66K64 600 aa24.73■■□□□ 1.55
MRPL40-201ENST00000333130 SAPCD2Q86UD0 394 aa24.73■■□□□ 1.55
MRPL40-201ENST00000333130 FAM198AQ9UFP1 575 aa24.73■■□□□ 1.55
MRPL40-201ENST00000333130 TCRBV5S4A2TA0A5A2 114 aa24.72■■□□□ 1.55
MRPL40-201ENST00000333130 HUNKP57058 714 aa24.72■■□□□ 1.55
MRPL40-201ENST00000333130 CRNKL1Q9BZJ0 848 aaKnown RBP24.72■■□□□ 1.55
MRPL40-201ENST00000333130 MYH1P12882 1939 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms