RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 CHD1LQ86WJ1 897 aa19.32■□□□□ 0.68
CCDC28A-201ENST00000332797 FAM163AQ96GL9 167 aaPredicted RBP19.32■□□□□ 0.68
CCDC28A-201ENST00000332797 DEFB129Q9H1M3 183 aa19.32■□□□□ 0.68
CCDC28A-201ENST00000332797 SALL3Q9BXA9 1300 aa19.31■□□□□ 0.68
CCDC28A-201ENST00000332797 ERC2O15083 957 aa19.31■□□□□ 0.68
CCDC28A-201ENST00000332797 HTRA3P83110 453 aa19.31■□□□□ 0.68
CCDC28A-201ENST00000332797 MAP3K12Q12852 859 aa19.31■□□□□ 0.68
CCDC28A-201ENST00000332797 TNFAIP1Q13829 316 aa19.31■□□□□ 0.68
CCDC28A-201ENST00000332797 CDC42EP5Q6NZY7 148 aa19.31■□□□□ 0.68
CCDC28A-201ENST00000332797 USP40Q9NVE5 1235 aa19.31■□□□□ 0.68
CCDC28A-201ENST00000332797 CST9Q5W186 159 aa19.3■□□□□ 0.68
CCDC28A-201ENST00000332797 MAGEB6Q8N7X4 407 aa19.3■□□□□ 0.68
CCDC28A-201ENST00000332797 NOL10Q9BSC4 688 aaKnown RBP19.3■□□□□ 0.68
CCDC28A-201ENST00000332797 CREBZFQ9NS37 354 aa19.3■□□□□ 0.68
CCDC28A-201ENST00000332797 GPR75-ASB3A0A0A6YYF3 556 aa19.29■□□□□ 0.68
CCDC28A-201ENST00000332797 IGSF3O75054 1194 aa19.29■□□□□ 0.68
CCDC28A-201ENST00000332797 CYP7A1P22680 504 aa19.29■□□□□ 0.68
CCDC28A-201ENST00000332797 TNNI2P48788 182 aa19.29■□□□□ 0.68
CCDC28A-201ENST00000332797 RASA3Q14644 834 aa19.29■□□□□ 0.68
CCDC28A-201ENST00000332797 ADGRA1Q86SQ6 560 aa19.29■□□□□ 0.68
CCDC28A-201ENST00000332797 PI4K2BQ8TCG2 481 aa19.29■□□□□ 0.68
CCDC28A-201ENST00000332797 PPP2R3BQ9Y5P8 575 aa19.29■□□□□ 0.68
CCDC28A-201ENST00000332797 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
CCDC28A-201ENST00000332797 CNTNAP1P78357 1384 aa19.28■□□□□ 0.68
CCDC28A-201ENST00000332797 MAP4K4O95819 1239 aaPredicted RBP19.28■□□□□ 0.68
CCDC28A-201ENST00000332797 PDE1AP54750 535 aa19.28■□□□□ 0.68
CCDC28A-201ENST00000332797 SLC9C2Q5TAH2 1124 aa19.28■□□□□ 0.68
CCDC28A-201ENST00000332797 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
CCDC28A-201ENST00000332797 AATFQ9NY61 560 aaKnown RBP eCLIP19.28■□□□□ 0.68
CCDC28A-201ENST00000332797 ABT1Q9ULW3 272 aaKnown RBP19.28■□□□□ 0.68
CCDC28A-201ENST00000332797 PDE6AP16499 860 aa19.27■□□□□ 0.67
CCDC28A-201ENST00000332797 NF2P35240 595 aa19.27■□□□□ 0.67
CCDC28A-201ENST00000332797 NFIAQ12857 509 aa19.27■□□□□ 0.67
CCDC28A-201ENST00000332797 FKBP1CQ5VVH2 108 aa19.27■□□□□ 0.67
CCDC28A-201ENST00000332797 STAP2Q9UGK3 403 aa19.27■□□□□ 0.67
CCDC28A-201ENST00000332797 BAG3O95817 575 aa19.26■□□□□ 0.67
CCDC28A-201ENST00000332797 RHBDL3P58872 404 aa19.26■□□□□ 0.67
CCDC28A-201ENST00000332797 TCP10Q12799 353 aa19.26■□□□□ 0.67
CCDC28A-201ENST00000332797 FAM83AQ86UY5 434 aa19.26■□□□□ 0.67
CCDC28A-201ENST00000332797 C2orf69Q8N8R5 385 aa19.26■□□□□ 0.67
CCDC28A-201ENST00000332797 MIGA1Q8NAN2 632 aa19.26■□□□□ 0.67
CCDC28A-201ENST00000332797 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.26■□□□□ 0.67
CCDC28A-201ENST00000332797 GBA2Q9HCG7 927 aaPredicted RBP19.26■□□□□ 0.67
CCDC28A-201ENST00000332797 PICALMQ13492 652 aa19.25■□□□□ 0.67
CCDC28A-201ENST00000332797 NBPF12Q5TAG4 269 aaPredicted RBP19.25■□□□□ 0.67
CCDC28A-201ENST00000332797 TMED8Q6PL24 325 aaPredicted RBP19.25■□□□□ 0.67
CCDC28A-201ENST00000332797 CDAN1Q8IWY9 1227 aa19.25■□□□□ 0.67
CCDC28A-201ENST00000332797 TEX11Q8IYF3 940 aa19.25■□□□□ 0.67
CCDC28A-201ENST00000332797 SH3RF3Q8TEJ3 882 aaPredicted RBP19.25■□□□□ 0.67
CCDC28A-201ENST00000332797 FAM198AQ9UFP1 575 aa19.25■□□□□ 0.67
CCDC28A-201ENST00000332797 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
CCDC28A-201ENST00000332797 RFX7Q2KHR2 1363 aa19.25■□□□□ 0.67
CCDC28A-201ENST00000332797 SSC5DA1L4H1 1573 aa19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 WDHD1O75717 1129 aaPredicted RBP19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 PLCG2P16885 1265 aa19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 RGS3P49796 1198 aa19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 DYNLL1P63167 89 aaKnown RBP19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 PRKG1Q13976 671 aa19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 TTLL12Q14166 644 aaPredicted RBP19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 KBTBD3Q8NAB2 608 aa19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 TEPSINQ96N21 525 aa19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 IDI2Q9BXS1 227 aa19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 MYH7P12883 1935 aa19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 PAPPA2Q9BXP8 1791 aa19.24■□□□□ 0.67
CCDC28A-201ENST00000332797 ADD2P35612 726 aa19.23■□□□□ 0.67
CCDC28A-201ENST00000332797 PPP4CP60510 307 aa19.23■□□□□ 0.67
CCDC28A-201ENST00000332797 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
CCDC28A-201ENST00000332797 PLEKHM2Q8IWE5 1019 aa19.23■□□□□ 0.67
CCDC28A-201ENST00000332797 FAM151AQ8WW52 585 aa19.23■□□□□ 0.67
CCDC28A-201ENST00000332797 CCDC136Q96JN2 1154 aa19.23■□□□□ 0.67
CCDC28A-201ENST00000332797 TLL2Q9Y6L7 1015 aa19.23■□□□□ 0.67
CCDC28A-201ENST00000332797 RPAP1Q9BWH6 1393 aaPredicted RBP19.23■□□□□ 0.67
CCDC28A-201ENST00000332797 TCRBV5S4A2TA0A5A2 114 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 SLFNL1Q499Z3 407 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 ZSCAN25Q6NSZ9 544 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 DDX4Q9NQI0 724 aaKnown RBP19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 FZD1Q9UP38 647 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 ENTPD3O75355 529 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 CHGBP05060 677 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 PDE4AP27815 886 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 HUNKP57058 714 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 MOB2Q70IA6 237 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 CENPQQ7L2Z9 268 aaPredicted RBP19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 SAPCD2Q86UD0 394 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 ZFPM1Q8IX07 1006 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 FSD1Q9BTV5 496 aa19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 MKRN1Q9UHC7 482 aaKnown RBP19.22■□□□□ 0.67
CCDC28A-201ENST00000332797 MAGEB6P1A0A0J9YX57 407 aa19.21■□□□□ 0.67
CCDC28A-201ENST00000332797 FKBP1BP68106 108 aa19.21■□□□□ 0.67
CCDC28A-201ENST00000332797 PAXIP1Q6ZW49 1069 aaPredicted RBP19.21■□□□□ 0.67
CCDC28A-201ENST00000332797 CERS3Q8IU89 383 aa19.21■□□□□ 0.67
CCDC28A-201ENST00000332797 RASSF10A6NK89 507 aa19.2■□□□□ 0.66
CCDC28A-201ENST00000332797 UBE3CQ15386 1083 aa19.2■□□□□ 0.66
CCDC28A-201ENST00000332797 ARMC9Q7Z3E5 817 aa19.2■□□□□ 0.66
CCDC28A-201ENST00000332797 ZSCAN29Q8IWY8 852 aaPredicted RBP19.2■□□□□ 0.66
CCDC28A-201ENST00000332797 TGFBRAP1Q8WUH2 860 aa19.2■□□□□ 0.66
CCDC28A-201ENST00000332797 RIOK1Q9BRS2 568 aaKnown RBP19.2■□□□□ 0.66
CCDC28A-201ENST00000332797 OSBPL3Q9H4L5 887 aa19.2■□□□□ 0.66
CCDC28A-201ENST00000332797 ANGEL1Q9UNK9 670 aaKnown RBP19.2■□□□□ 0.66
CCDC28A-201ENST00000332797 CDK5RAP2Q96SN8 1893 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms