RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 GAS2L3Q86XJ1 694 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 STAG1Q8WVM7 1258 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 NEDD4P46934 1319 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 TIAM2Q8IVF5 1701 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 MYH13Q9UKX3 1938 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 CPLX1O14810 134 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 ADGRA1Q86SQ6 560 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 PROM2Q8N271 834 aa16.4■□□□□ 0.22
TRAIP-201ENST00000331456 SCAND2PQ9GZW5 306 aaPredicted RBP16.4■□□□□ 0.22
TRAIP-201ENST00000331456 SALL1Q9NSC2 1324 aa16.39■□□□□ 0.22
TRAIP-201ENST00000331456 TCHHQ07283 1943 aa16.39■□□□□ 0.21
TRAIP-201ENST00000331456 ZNF804AQ7Z570 1209 aa16.39■□□□□ 0.21
TRAIP-201ENST00000331456 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
TRAIP-201ENST00000331456 CACNA1SQ13698 1873 aa16.39■□□□□ 0.21
TRAIP-201ENST00000331456 POLRMTO00411 1230 aaKnown RBP16.38■□□□□ 0.21
TRAIP-201ENST00000331456 BBOX1O75936 387 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 APBA3O96018 575 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 SART3Q15020 963 aaKnown RBP16.38■□□□□ 0.21
TRAIP-201ENST00000331456 TMEM67Q5HYA8 995 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 NSUN4Q96CB9 384 aaKnown RBP16.38■□□□□ 0.21
TRAIP-201ENST00000331456 HPS5Q9UPZ3 1129 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 IRS2Q9Y4H2 1338 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 ELP1O95163 1332 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 MECOMQ03112 1051 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 PPARAQ07869 468 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 RESTQ13127 1097 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 GIMAP6Q6P9H5 292 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 C15orf52Q6ZUT6 534 aaKnown RBP16.38■□□□□ 0.21
TRAIP-201ENST00000331456 WDR66Q8TBY9 1149 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 BRIP1Q9BX63 1249 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 TOMM22Q9NS69 142 aa16.38■□□□□ 0.21
TRAIP-201ENST00000331456 IFIT3O14879 490 aaKnown RBP16.37■□□□□ 0.21
TRAIP-201ENST00000331456 KDM4AO75164 1064 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 CDKL5O76039 1030 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 ATP2B4P23634 1241 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 LIFRP42702 1097 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 DDR1Q08345 913 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 CPLX2Q6PUV4 134 aaKnown RBP16.37■□□□□ 0.21
TRAIP-201ENST00000331456 TXNRD3Q86VQ6 643 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 FLAD1Q8NFF5 587 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 ANAPC4Q9UJX5 808 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 CHD4Q14839 1912 aa16.37■□□□□ 0.21
TRAIP-201ENST00000331456 HOXA10P31260 410 aaPredicted RBP16.36■□□□□ 0.21
TRAIP-201ENST00000331456 METAP2P50579 478 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRAIP-201ENST00000331456 LRSAM1Q6UWE0 723 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 SYNE3Q6ZMZ3 975 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 SDR42E1Q8WUS8 393 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 ZSWIM5Q9P217 1185 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 MAST2Q6P0Q8 1798 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 ERICH2A1L162 156 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 CCDC69A6NI79 296 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 RXRBP28702 533 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 DYNLL1P63167 89 aaKnown RBP16.36■□□□□ 0.21
TRAIP-201ENST00000331456 GPSM2P81274 684 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 RRP12Q5JTH9 1297 aaKnown RBP16.36■□□□□ 0.21
TRAIP-201ENST00000331456 CCDC183Q5T5S1 534 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 SGMS1Q86VZ5 419 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 DZIP1Q86YF9 867 aaKnown RBP16.36■□□□□ 0.21
TRAIP-201ENST00000331456 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 CRNKL1Q9BZJ0 848 aaKnown RBP16.36■□□□□ 0.21
TRAIP-201ENST00000331456 LY9Q9HBG7 655 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 GGA1Q9UJY5 639 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 CFAP45Q9UL16 551 aa16.36■□□□□ 0.21
TRAIP-201ENST00000331456 SYCE3A1L190 88 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 ZBTB43O43298 467 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 LETM1O95202 739 aaPredicted RBP16.35■□□□□ 0.21
TRAIP-201ENST00000331456 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 TMTC2Q8N394 836 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 TDRD7Q8NHU6 1098 aaKnown RBP16.35■□□□□ 0.21
TRAIP-201ENST00000331456 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 INCENPQ9NQS7 918 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
TRAIP-201ENST00000331456 KLRG2A4D1S0 409 aaPredicted RBP16.35■□□□□ 0.21
TRAIP-201ENST00000331456 UFL1O94874 794 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 PCP11498 1178 aaKnown RBP16.35■□□□□ 0.21
TRAIP-201ENST00000331456 PRDX5P30044 214 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 FOSBP53539 338 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 FAM173BQ6P4H8 233 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 RGS22Q8NE09 1264 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 ZNF384Q8TF68 577 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 SLC12A7Q9Y666 1083 aa16.35■□□□□ 0.21
TRAIP-201ENST00000331456 GOLGA6L4A6NEF3 574 aa16.34■□□□□ 0.21
TRAIP-201ENST00000331456 LDHBP07195 334 aaKnown RBP16.34■□□□□ 0.21
TRAIP-201ENST00000331456 FDPSP14324 419 aaKnown RBP16.34■□□□□ 0.21
TRAIP-201ENST00000331456 GSTO1P78417 241 aa16.34■□□□□ 0.21
TRAIP-201ENST00000331456 ZNF827Q17R98 1081 aa16.34■□□□□ 0.21
TRAIP-201ENST00000331456 ATL3Q6DD88 541 aa16.34■□□□□ 0.21
TRAIP-201ENST00000331456 TTC6Q86TZ1 520 aa16.34■□□□□ 0.21
TRAIP-201ENST00000331456 ESR2Q92731 530 aa16.34■□□□□ 0.21
TRAIP-201ENST00000331456 C8orf76Q96K31 380 aa16.34■□□□□ 0.21
TRAIP-201ENST00000331456 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.21
TRAIP-201ENST00000331456 GOLGA8AA7E2F4 631 aa16.33■□□□□ 0.21
TRAIP-201ENST00000331456 WTAPQ15007 396 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms