RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 BCAS4Q8TDM0 211 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 KAT2BQ92831 832 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 BTBD11A6QL63 1104 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 AKR1B15C9JRZ8 316 aaPredicted RBP23.47■■□□□ 1.35
CMTM4-201ENST00000330687 CCDC82Q8N4S0 544 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 BPIFA3Q9BQP9 254 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 FAM107BQ9H098 131 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 GBP3Q9H0R5 595 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 USP42Q9H9J4 1324 aaKnown RBP23.47■■□□□ 1.35
CMTM4-201ENST00000330687 COL15A1P39059 1388 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 GRM8O00222 908 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 CCDC172P0C7W6 258 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 ATP6V1AP38606 617 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 DBNLQ9UJU6 430 aaKnown RBP23.47■■□□□ 1.35
CMTM4-201ENST00000330687 ARHGEF10O15013 1369 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 ADGRL3Q9HAR2 1447 aa23.47■■□□□ 1.35
CMTM4-201ENST00000330687 E7EWF7 191 aa23.46■■□□□ 1.35
CMTM4-201ENST00000330687 WASHC4Q2M389 1173 aa23.46■■□□□ 1.35
CMTM4-201ENST00000330687 CAPN7Q9Y6W3 813 aa23.46■■□□□ 1.35
CMTM4-201ENST00000330687 FAM169AQ9Y6X4 670 aa23.46■■□□□ 1.35
CMTM4-201ENST00000330687 POTEB2H3BUK9 544 aa23.46■■□□□ 1.35
CMTM4-201ENST00000330687 CCDC148Q8NFR7 591 aa23.46■■□□□ 1.35
CMTM4-201ENST00000330687 KIF20BQ96Q89 1820 aa23.46■■□□□ 1.35
CMTM4-201ENST00000330687 FMR1Q06787 632 aaKnown RBP eCLIP23.45■■□□□ 1.34
CMTM4-201ENST00000330687 FCHSD1Q86WN1 690 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 SUFUQ9UMX1 484 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 CEP83Q9Y592 693 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 EXOC5O00471 708 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 SRGAP2O75044 1071 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 INPP5BP32019 993 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 CCT6AP40227 531 aaKnown RBP23.45■■□□□ 1.34
CMTM4-201ENST00000330687 TDO2P48775 406 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 PSEN1P49768 467 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 RBL2Q08999 1139 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 MED23Q9ULK4 1368 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 CMA1P23946 247 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 GIMAP7Q8NHV1 300 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 SLF1Q9BQI6 1058 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 SNRKQ9NRH2 765 aa23.45■■□□□ 1.34
CMTM4-201ENST00000330687 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.44■■□□□ 1.34
CMTM4-201ENST00000330687 HDAC6Q9UBN7 1215 aa23.44■■□□□ 1.34
CMTM4-201ENST00000330687 ZEB2O60315 1214 aa23.44■■□□□ 1.34
CMTM4-201ENST00000330687 HNRNPH1P31943 449 aaKnown RBP23.44■■□□□ 1.34
CMTM4-201ENST00000330687 MATR3P43243 847 aaKnown RBP eCLIP23.44■■□□□ 1.34
CMTM4-201ENST00000330687 ATL3Q6DD88 541 aa23.44■■□□□ 1.34
CMTM4-201ENST00000330687 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.44■■□□□ 1.34
CMTM4-201ENST00000330687 FOXP4Q8IVH2 680 aaPredicted RBP23.44■■□□□ 1.34
CMTM4-201ENST00000330687 A1BGP04217 495 aa23.43■■□□□ 1.34
CMTM4-201ENST00000330687 PHKBQ93100 1093 aa23.43■■□□□ 1.34
CMTM4-201ENST00000330687 YEATS4O95619 227 aa23.43■■□□□ 1.34
CMTM4-201ENST00000330687 EIF5P55010 431 aaKnown RBP23.43■■□□□ 1.34
CMTM4-201ENST00000330687 TFR2Q9UP52 801 aa23.43■■□□□ 1.34
CMTM4-201ENST00000330687 ADGRG1Q9Y653 693 aa23.43■■□□□ 1.34
CMTM4-201ENST00000330687 HMGB1P09429 215 aaKnown RBP23.43■■□□□ 1.34
CMTM4-201ENST00000330687 CHRM1P11229 460 aaPredicted RBP23.43■■□□□ 1.34
CMTM4-201ENST00000330687 GGCXP38435 758 aa23.43■■□□□ 1.34
CMTM4-201ENST00000330687 STIM1Q13586 685 aa23.43■■□□□ 1.34
CMTM4-201ENST00000330687 RNF187Q5TA31 235 aaPredicted RBP23.43■■□□□ 1.34
CMTM4-201ENST00000330687 NAPGQ99747 312 aaPredicted RBP23.43■■□□□ 1.34
CMTM4-201ENST00000330687 KAT14Q9H8E8 782 aa23.43■■□□□ 1.34
CMTM4-201ENST00000330687 KCNH3Q9ULD8 1083 aa23.43■■□□□ 1.34
CMTM4-201ENST00000330687 CLGNO14967 610 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 SSBP05455 408 aaKnown RBP eCLIP23.42■■□□□ 1.34
CMTM4-201ENST00000330687 AFMP43652 599 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 SHC4Q6S5L8 630 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 GBP6Q6ZN66 633 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 FAM76AQ8TAV0 307 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 C19orf44Q9H6X5 657 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 ANKRD26Q9UPS8 1709 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 SHTN1A0MZ66 631 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 FRMD3A2A2Y4 597 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 EIF4A1P60842 406 aaKnown RBP23.42■■□□□ 1.34
CMTM4-201ENST00000330687 METTL16Q86W50 562 aaKnown RBP23.42■■□□□ 1.34
CMTM4-201ENST00000330687 GOLGA6CA6NDK9 693 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 GOLGA6DP0CG33 693 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 CASP14P31944 242 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 RDXP35241 583 aaKnown RBP23.42■■□□□ 1.34
CMTM4-201ENST00000330687 FKBP4Q02790 459 aaKnown RBP eCLIP23.42■■□□□ 1.34
CMTM4-201ENST00000330687 GOLGA6AQ9NYA3 693 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 TRIM10Q9UDY6 481 aa23.42■■□□□ 1.34
CMTM4-201ENST00000330687 CDC25AP30304 524 aa23.41■■□□□ 1.34
CMTM4-201ENST00000330687 DBF4Q9UBU7 674 aaPredicted RBP23.41■■□□□ 1.34
CMTM4-201ENST00000330687 CASP1P29466 404 aa23.41■■□□□ 1.34
CMTM4-201ENST00000330687 RALYLQ86SE5 291 aaKnown RBP23.41■■□□□ 1.34
CMTM4-201ENST00000330687 SMYD4Q8IYR2 804 aaPredicted RBP23.41■■□□□ 1.34
CMTM4-201ENST00000330687 ALG1Q9BT22 464 aa23.41■■□□□ 1.34
CMTM4-201ENST00000330687 POLR3EQ9NVU0 708 aa23.41■■□□□ 1.34
CMTM4-201ENST00000330687 MYO1FO00160 1098 aa23.4■■□□□ 1.34
CMTM4-201ENST00000330687 POLR2DO15514 142 aaKnown RBP23.4■■□□□ 1.34
CMTM4-201ENST00000330687 ALDH8A1Q9H2A2 487 aaPredicted RBP23.4■■□□□ 1.34
CMTM4-201ENST00000330687 KIAA0754O94854 1291 aa23.4■■□□□ 1.34
CMTM4-201ENST00000330687 GNGT1P63211 74 aa23.4■■□□□ 1.34
CMTM4-201ENST00000330687 JMYQ8N9B5 988 aa23.4■■□□□ 1.34
CMTM4-201ENST00000330687 NUP88Q99567 741 aaPredicted RBP23.4■■□□□ 1.34
CMTM4-201ENST00000330687 NEDD4P46934 1319 aa23.4■■□□□ 1.34
CMTM4-201ENST00000330687 MICU3Q86XE3 530 aa23.4■■□□□ 1.34
CMTM4-201ENST00000330687 GPIHBP1Q8IV16 184 aa23.4■■□□□ 1.34
CMTM4-201ENST00000330687 MED4Q9NPJ6 270 aa23.4■■□□□ 1.34
CMTM4-201ENST00000330687 BMP6P22004 513 aa23.39■■□□□ 1.34
CMTM4-201ENST00000330687 ATP1A2P50993 1020 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms