RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 POTEAQ6S8J7 498 aa19.96■□□□□ 0.79
DDX41-201ENST00000330503 IGDCC4Q8TDY8 1250 aa19.96■□□□□ 0.79
DDX41-201ENST00000330503 FERMT3Q86UX7 667 aa19.95■□□□□ 0.78
DDX41-201ENST00000330503 TIAM2Q8IVF5 1701 aa19.95■□□□□ 0.78
DDX41-201ENST00000330503 GOLGA6L3A6NEY3 463 aa19.94■□□□□ 0.78
DDX41-201ENST00000330503 ATP2B4P23634 1241 aa19.94■□□□□ 0.78
DDX41-201ENST00000330503 GAS2L3Q86XJ1 694 aa19.94■□□□□ 0.78
DDX41-201ENST00000330503 FLAD1Q8NFF5 587 aa19.94■□□□□ 0.78
DDX41-201ENST00000330503 STAG1Q8WVM7 1258 aa19.94■□□□□ 0.78
DDX41-201ENST00000330503 BRIP1Q9BX63 1249 aa19.94■□□□□ 0.78
DDX41-201ENST00000330503 SENP2Q9HC62 589 aa19.94■□□□□ 0.78
DDX41-201ENST00000330503 ZSWIM5Q9P217 1185 aa19.94■□□□□ 0.78
DDX41-201ENST00000330503 RBM27Q9P2N5 1060 aaKnown RBP19.94■□□□□ 0.78
DDX41-201ENST00000330503 ANGEL1Q9UNK9 670 aaKnown RBP19.94■□□□□ 0.78
DDX41-201ENST00000330503 ANKRD31Q8N7Z5 1873 aa19.94■□□□□ 0.78
DDX41-201ENST00000330503 HMGN5P82970 282 aaKnown RBP19.94■□□□□ 0.78
DDX41-201ENST00000330503 TNS1Q9HBL0 1735 aaKnown RBP19.93■□□□□ 0.78
DDX41-201ENST00000330503 NRXN2Q9P2S2 1712 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 SMIM22K7EJ46 135 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 FDPSP14324 419 aaKnown RBP19.93■□□□□ 0.78
DDX41-201ENST00000330503 MFSD6Q6ZSS7 791 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 FAM184AQ8NB25 1140 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 CHMP4CQ96CF2 233 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 TMEM87BQ96K49 555 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 PODXL2Q9NZ53 605 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 ANAPC4Q9UJX5 808 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 CHD4Q14839 1912 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 GOLGA8BA8MQT2 603 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 KDM4AO75164 1064 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 UFL1O94874 794 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 MBD3O95983 291 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 PPARAQ07869 468 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 FAM173BQ6P4H8 233 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 ZNF804AQ7Z570 1209 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 RAB11FIP4Q86YS3 637 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 CNNM2Q9H8M5 875 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 POLLQ9UGP5 575 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 GGA1Q9UJY5 639 aa19.93■□□□□ 0.78
DDX41-201ENST00000330503 PPFIA3O75145 1194 aa19.92■□□□□ 0.78
DDX41-201ENST00000330503 KRT23Q9C075 422 aa19.92■□□□□ 0.78
DDX41-201ENST00000330503 LY9Q9HBG7 655 aa19.92■□□□□ 0.78
DDX41-201ENST00000330503 TMEM63CQ9P1W3 806 aa19.92■□□□□ 0.78
DDX41-201ENST00000330503 GRIK5Q16478 980 aa19.91■□□□□ 0.78
DDX41-201ENST00000330503 ZSCAN23Q3MJ62 389 aa19.91■□□□□ 0.78
DDX41-201ENST00000330503 SPTY2D1Q68D10 685 aaPredicted RBP19.91■□□□□ 0.78
DDX41-201ENST00000330503 WDR66Q8TBY9 1149 aa19.91■□□□□ 0.78
DDX41-201ENST00000330503 MINDY4BA8MYZ0 360 aa19.91■□□□□ 0.78
DDX41-201ENST00000330503 RESTQ13127 1097 aa19.91■□□□□ 0.78
DDX41-201ENST00000330503 L1TD1Q5T7N2 865 aaKnown RBP19.91■□□□□ 0.78
DDX41-201ENST00000330503 SP8Q8IXZ3 490 aa19.91■□□□□ 0.78
DDX41-201ENST00000330503 STK11IPQ8N1F8 1099 aa19.91■□□□□ 0.78
DDX41-201ENST00000330503 TBC1D16Q8TBP0 767 aa19.91■□□□□ 0.78
DDX41-201ENST00000330503 CD209Q9NNX6 404 aa19.91■□□□□ 0.78
DDX41-201ENST00000330503 FIBPO43427 364 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 MMP10P09238 476 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 SRGNP10124 158 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 GIMAP6Q6P9H5 292 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 TMED8Q6PL24 325 aaPredicted RBP19.9■□□□□ 0.78
DDX41-201ENST00000330503 SGMS1Q86VZ5 419 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 AATFQ9NY61 560 aaKnown RBP eCLIP19.9■□□□□ 0.78
DDX41-201ENST00000330503 CYP2D7A0A087X1C5 515 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 H3BQV1 296 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 XRCC6P12956 609 aaKnown RBP eCLIP19.9■□□□□ 0.78
DDX41-201ENST00000330503 IL1R1P14778 569 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 ZNF445P59923 1031 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 TMEM67Q5HYA8 995 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 IFFO2Q5TF58 517 aa19.9■□□□□ 0.78
DDX41-201ENST00000330503 CCDC88AQ3V6T2 1871 aa19.89■□□□□ 0.78
DDX41-201ENST00000330503 LIFRP42702 1097 aa19.89■□□□□ 0.77
DDX41-201ENST00000330503 RRP12Q5JTH9 1297 aaKnown RBP19.89■□□□□ 0.77
DDX41-201ENST00000330503 CTR9Q6PD62 1173 aa19.89■□□□□ 0.77
DDX41-201ENST00000330503 TMC4Q7Z404 712 aa19.89■□□□□ 0.77
DDX41-201ENST00000330503 MAST2Q6P0Q8 1798 aa19.89■□□□□ 0.77
DDX41-201ENST00000330503 PPEF1O14829 653 aaPredicted RBP19.88■□□□□ 0.77
DDX41-201ENST00000330503 IFIT3O14879 490 aaKnown RBP19.88■□□□□ 0.77
DDX41-201ENST00000330503 DHX16O60231 1041 aaKnown RBP19.88■□□□□ 0.77
DDX41-201ENST00000330503 LDHBP07195 334 aaKnown RBP19.88■□□□□ 0.77
DDX41-201ENST00000330503 MSL1Q68DK7 614 aa19.88■□□□□ 0.77
DDX41-201ENST00000330503 APOA5Q6Q788 366 aa19.88■□□□□ 0.77
DDX41-201ENST00000330503 RNF41Q9H4P4 317 aaPredicted RBP19.88■□□□□ 0.77
DDX41-201ENST00000330503 PARP3Q9Y6F1 533 aa19.88■□□□□ 0.77
DDX41-201ENST00000330503 LRRC37AA6NMS7 1700 aa19.88■□□□□ 0.77
DDX41-201ENST00000330503 BAZ2AQ9UIF9 1905 aaKnown RBP19.88■□□□□ 0.77
DDX41-201ENST00000330503 IGSF3O75054 1194 aa19.88■□□□□ 0.77
DDX41-201ENST00000330503 FOSBP53539 338 aa19.88■□□□□ 0.77
DDX41-201ENST00000330503 DZIP1Q86YF9 867 aaKnown RBP19.88■□□□□ 0.77
DDX41-201ENST00000330503 ISY1Q9ULR0 285 aaKnown RBP19.88■□□□□ 0.77
DDX41-201ENST00000330503 ATP6V0A2Q9Y487 856 aa19.88■□□□□ 0.77
DDX41-201ENST00000330503 KIF3AQ9Y496 699 aa19.88■□□□□ 0.77
DDX41-201ENST00000330503 LTBP1Q14766 1721 aa19.88■□□□□ 0.77
DDX41-201ENST00000330503 NPR1P16066 1061 aa19.87■□□□□ 0.77
DDX41-201ENST00000330503 ADD1P35611 737 aaKnown RBP19.87■□□□□ 0.77
DDX41-201ENST00000330503 UBE2HP62256 183 aa19.87■□□□□ 0.77
DDX41-201ENST00000330503 CRNKL1Q9BZJ0 848 aaKnown RBP19.87■□□□□ 0.77
DDX41-201ENST00000330503 RGPD3A6NKT7 1758 aaPredicted RBP19.87■□□□□ 0.77
DDX41-201ENST00000330503 RGPD4Q7Z3J3 1758 aa19.87■□□□□ 0.77
DDX41-201ENST00000330503 USP17L12C9JPN9 530 aa19.87■□□□□ 0.77
DDX41-201ENST00000330503 USP17L21D6R901 530 aa19.87■□□□□ 0.77
DDX41-201ENST00000330503 FGRP09769 529 aa19.87■□□□□ 0.77
DDX41-201ENST00000330503 CDC27P30260 824 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms