RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 ZKSCAN4Q969J2 545 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 SUCLG2Q96I99 432 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 SCAND2PQ9GZW5 306 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 SIL1Q9H173 461 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 STRN4Q9NRL3 753 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 C9orf78Q9NZ63 289 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 SLAIN2Q9P270 581 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 FAM169AQ9Y6X4 670 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 SHANK3Q9BYB0 1731 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 ROBO1Q9Y6N7 1651 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 FSBPO95073 299 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 TPRNQ4KMQ1 711 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 IQCA1Q86XH1 822 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 SPATS2Q86XZ4 545 aaKnown RBP8.57□□□□□ -1.04
TRIM49-201ENST00000329758 MSANTD4Q8NCY6 345 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 SSH3Q8TE77 659 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 XAGE2Q96GT9 111 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 SLC52A2Q9HAB3 445 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 BABAM1Q9NWV8 329 aa8.57□□□□□ -1.04
TRIM49-201ENST00000329758 BECN2A8MW95 431 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 ZSCAN12O43309 604 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 POLA2Q14181 598 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 KAZALD1Q96I82 304 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 PSMD1Q99460 953 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 LARP6Q9BRS8 491 aaKnown RBP8.56□□□□□ -1.04
TRIM49-201ENST00000329758 FAM204AQ9H8W3 233 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 SOS2Q07890 1332 aaPredicted RBP8.56□□□□□ -1.04
TRIM49-201ENST00000329758 PARP4Q9UKK3 1724 aaKnown RBP8.56□□□□□ -1.04
TRIM49-201ENST00000329758 GOLGA6L4A6NEF3 574 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 ATP5J2-PTCD1G3V325 749 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
TRIM49-201ENST00000329758 SNUPNO95149 360 aaKnown RBP8.56□□□□□ -1.04
TRIM49-201ENST00000329758 IGKV5-2P06315 115 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 CHMLP26374 656 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 SF3B2Q13435 895 aaKnown RBP8.56□□□□□ -1.04
TRIM49-201ENST00000329758 EPHA10Q5JZY3 1008 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 KSR2Q6VAB6 950 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 COPS6Q7L5N1 327 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 ANKRD23Q86SG2 305 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 ZNF513Q8N8E2 541 aaPredicted RBP8.56□□□□□ -1.04
TRIM49-201ENST00000329758 DDX54Q8TDD1 881 aaKnown RBP8.56□□□□□ -1.04
TRIM49-201ENST00000329758 TTC14Q96N46 770 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 MYD88Q99836 296 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 VIPAS39Q9H9C1 493 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 ANO2Q9NQ90 1003 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 CPSF2Q9P2I0 782 aaKnown RBP8.56□□□□□ -1.04
TRIM49-201ENST00000329758 L1RE1Q9UN81 338 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 LIMCH1Q9UPQ0 1083 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 RPS6KL1Q9Y6S9 549 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 CPDO75976 1380 aa8.56□□□□□ -1.04
TRIM49-201ENST00000329758 AARSP49588 968 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRIM49-201ENST00000329758 SLC8A3P57103 927 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 PLCB4Q15147 1175 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 RCSD1Q6JBY9 416 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 UPF3BQ9BZI7 483 aaKnown RBP8.55□□□□□ -1.04
TRIM49-201ENST00000329758 PRDM11Q9NQV5 511 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 SHTN1A0MZ66 631 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
TRIM49-201ENST00000329758 MYBL2P10244 700 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 GJB2P29033 226 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 HSPA4P34932 840 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 PRPHP41219 470 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 FNTAP49354 379 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 CCNHP51946 323 aaPredicted RBP8.55□□□□□ -1.04
TRIM49-201ENST00000329758 MCM6Q14566 821 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 SLC5A9Q2M3M2 681 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 ISM2Q6H9L7 571 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 ARMCX5Q6P1M9 558 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 C11orf57Q6ZUT1 292 aaPredicted RBP8.55□□□□□ -1.04
TRIM49-201ENST00000329758 TOM1L2Q6ZVM7 507 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 KIAA1328Q86T90 577 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 PI4K2BQ8TCG2 481 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 KCNB2Q92953 911 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 TMX4Q9H1E5 349 aaPredicted RBP8.55□□□□□ -1.04
TRIM49-201ENST00000329758 SH2B1Q9NRF2 756 aaPredicted RBP8.55□□□□□ -1.04
TRIM49-201ENST00000329758 HOMER3Q9NSC5 361 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 ANO10Q9NW15 660 aa8.55□□□□□ -1.04
TRIM49-201ENST00000329758 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
TRIM49-201ENST00000329758 HEG1Q9ULI3 1381 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 OVOS2A0A0G2JMS6 1433 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 COL5A2P05997 1499 aaPredicted RBP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 PES1O00541 588 aaKnown RBP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 HOXB7P09629 217 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 RPS6KA3P51812 740 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 CLNS1AP54105 237 aaKnown RBP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 DHX40Q8IX18 779 aaKnown RBP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 CEP57L1Q8IYX8 460 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 KLHL23Q8NBE8 558 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 MAGEC3Q8TD91 643 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 ZSCAN31Q96LW9 406 aaPredicted RBP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 CCDC8Q9H0W5 538 aaPredicted RBP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 EPC1Q9H2F5 836 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 DDX21Q9NR30 783 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 IRAK4Q9NWZ3 460 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 SPG7Q9UQ90 795 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms