RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.44■□□□□ 0.54
SYNM-201ENST00000328642 CCDC43Q96MW1 224 aaKnown RBP18.44■□□□□ 0.54
SYNM-201ENST00000328642 AKNAD1Q5T1N1 836 aa18.44■□□□□ 0.54
SYNM-201ENST00000328642 KCNG4Q8TDN1 519 aa18.44■□□□□ 0.54
SYNM-201ENST00000328642 TOB2Q14106 344 aaPredicted RBP18.43■□□□□ 0.54
SYNM-201ENST00000328642 DOK7Q18PE1 504 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 FILIP1LQ4L180 1135 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 TEX11Q8IYF3 940 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 BTBD18B2RXH4 712 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 ZNF445P59923 1031 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 SPTY2D1Q68D10 685 aaPredicted RBP18.43■□□□□ 0.54
SYNM-201ENST00000328642 GPIHBP1Q8IV16 184 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 CELF1Q92879 486 aaKnown RBP18.43■□□□□ 0.54
SYNM-201ENST00000328642 CLIC6Q96NY7 704 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 DENND2AQ9ULE3 1009 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 VWA3AA6NCI4 1184 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 ERCC3P19447 782 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 DIXDC1Q155Q3 683 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 MEGF6O75095 1541 aa18.43■□□□□ 0.54
SYNM-201ENST00000328642 GTF2IP78347 998 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 PPFIBP1Q86W92 1011 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 PALLDQ8WX93 1383 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.42■□□□□ 0.54
SYNM-201ENST00000328642 PATL2C9JE40 543 aaKnown RBP18.42■□□□□ 0.54
SYNM-201ENST00000328642 UBA7P41226 1012 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 STOX1Q6ZVD7 989 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 GOLGA8HP0CJ92 632 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 SCNN1DP51172 638 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 ZNF804AQ7Z570 1209 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.42■□□□□ 0.54
SYNM-201ENST00000328642 CEP131Q9UPN4 1083 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 V9GYY5 206 aaPredicted RBP18.42■□□□□ 0.54
SYNM-201ENST00000328642 SSH2Q76I76 1423 aa18.42■□□□□ 0.54
SYNM-201ENST00000328642 ANO1Q5XXA6 986 aa18.41■□□□□ 0.54
SYNM-201ENST00000328642 MARCH10Q8NA82 808 aaPredicted RBP18.41■□□□□ 0.54
SYNM-201ENST00000328642 NSUN7Q8NE18 718 aaKnown RBP18.41■□□□□ 0.54
SYNM-201ENST00000328642 CCDC112Q8NEF3 446 aa18.41■□□□□ 0.54
SYNM-201ENST00000328642 QTRT2Q9H974 415 aaKnown RBP18.41■□□□□ 0.54
SYNM-201ENST00000328642 CLIC4Q9Y696 253 aa18.41■□□□□ 0.54
SYNM-201ENST00000328642 APBA3O96018 575 aa18.41■□□□□ 0.54
SYNM-201ENST00000328642 ZNF76P36508 570 aa18.41■□□□□ 0.54
SYNM-201ENST00000328642 TFAP4Q01664 338 aa18.41■□□□□ 0.54
SYNM-201ENST00000328642 SMARCE1Q969G3 411 aa18.41■□□□□ 0.54
SYNM-201ENST00000328642 ISCA1Q9BUE6 129 aa18.41■□□□□ 0.54
SYNM-201ENST00000328642 CBX8Q9HC52 389 aa18.41■□□□□ 0.54
SYNM-201ENST00000328642 PPARAQ07869 468 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 ZKSCAN5Q9Y2L8 839 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 TRIM75PA6NK02 468 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 SMTNL1A8MU46 457 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 CTAGE5O15320 804 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 KIF5BP33176 963 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 COL9A3Q14050 684 aaPredicted RBP18.4■□□□□ 0.54
SYNM-201ENST00000328642 TSC1Q92574 1164 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 EEF2KMTQ96G04 330 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 GPCPD1Q9NPB8 672 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 TOP1P11387 765 aaKnown RBP18.4■□□□□ 0.54
SYNM-201ENST00000328642 TNNT1P13805 278 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 ADD2P35612 726 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 ZSWIM5Q9P217 1185 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 MAGEC2Q9UBF1 373 aaPredicted RBP18.4■□□□□ 0.54
SYNM-201ENST00000328642 PFKFB2O60825 505 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 GNAT2P19087 354 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 PIK3AP1Q6ZUJ8 805 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 ZNF287Q9HBT7 754 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 IFNKQ9P0W0 207 aa18.4■□□□□ 0.54
SYNM-201ENST00000328642 NAPAP54920 295 aa18.39■□□□□ 0.53
SYNM-201ENST00000328642 TMTC2Q8N394 836 aa18.39■□□□□ 0.53
SYNM-201ENST00000328642 TTC14Q96N46 770 aa18.39■□□□□ 0.53
SYNM-201ENST00000328642 POLR2DO15514 142 aaKnown RBP18.39■□□□□ 0.53
SYNM-201ENST00000328642 CLCN1P35523 988 aa18.39■□□□□ 0.53
SYNM-201ENST00000328642 ZNF827Q17R98 1081 aa18.39■□□□□ 0.53
SYNM-201ENST00000328642 UBA5Q9GZZ9 404 aa18.39■□□□□ 0.53
SYNM-201ENST00000328642 TNKSO95271 1327 aa18.39■□□□□ 0.53
SYNM-201ENST00000328642 CIAO1O76071 339 aa18.39■□□□□ 0.53
SYNM-201ENST00000328642 ZNF654Q8IZM8 581 aa18.39■□□□□ 0.53
SYNM-201ENST00000328642 AK9Q5TCS8 1911 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 OFD1O75665 1012 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 NOLC1Q14978 699 aaKnown RBP eCLIP18.38■□□□□ 0.53
SYNM-201ENST00000328642 MYSM1Q5VVJ2 828 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 ANKRD2Q9GZV1 360 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 ZSWIM4Q9H7M6 989 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 VEZTQ9HBM0 779 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 EPS15P42566 896 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 RFX5P48382 616 aaPredicted RBP18.38■□□□□ 0.53
SYNM-201ENST00000328642 MFSD14BQ5SR56 506 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 TBC1D9BQ66K14 1250 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 ITSN1Q15811 1721 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 PRDX5P30044 214 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 UBASH3AP57075 661 aa18.38■□□□□ 0.53
SYNM-201ENST00000328642 NEURL4Q96JN8 1562 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 COBLO75128 1261 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 FAM160A1Q05DH4 1040 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 ITPK1Q13572 414 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 TMEM87BQ96K49 555 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 TMOD2Q9NZR1 351 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 GGA1Q9UJY5 639 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 ZNF202O95125 648 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 DNA2P51530 1060 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 PTPN14Q15678 1187 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms