RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 USP48Q86UV5 1035 aa17.57■□□□□ 0.4
TPM3-205ENST00000328159 FAM184AQ8NB25 1140 aa17.57■□□□□ 0.4
TPM3-205ENST00000328159 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
TPM3-205ENST00000328159 CNNM2Q9H8M5 875 aa17.57■□□□□ 0.4
TPM3-205ENST00000328159 GDPD2Q9HCC8 539 aa17.57■□□□□ 0.4
TPM3-205ENST00000328159 NSFL1CQ9UNZ2 370 aaKnown RBP17.57■□□□□ 0.4
TPM3-205ENST00000328159 SALL1Q9NSC2 1324 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 KIAA1551Q9HCM1 1747 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 GOLGA6L3A6NEY3 463 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 SH2B2O14492 632 aaPredicted RBP17.56■□□□□ 0.4
TPM3-205ENST00000328159 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
TPM3-205ENST00000328159 SDR42E1Q8WUS8 393 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 STAG1Q8WVM7 1258 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 TMEM87BQ96K49 555 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 KRT23Q9C075 422 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 INCENPQ9NQS7 918 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 ANGEL1Q9UNK9 670 aaKnown RBP17.56■□□□□ 0.4
TPM3-205ENST00000328159 TACC3Q9Y6A5 838 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 GOLGA8BA8MQT2 603 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 UFL1O94874 794 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 PRDX5P30044 214 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 L1TD1Q5T7N2 865 aaKnown RBP17.56■□□□□ 0.4
TPM3-205ENST00000328159 CAVIN1Q6NZI2 390 aaKnown RBP17.56■□□□□ 0.4
TPM3-205ENST00000328159 MFSD6Q6ZSS7 791 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 WDR66Q8TBY9 1149 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 GPR101Q96P66 508 aaPredicted RBP17.56■□□□□ 0.4
TPM3-205ENST00000328159 RGS17Q9UGC6 210 aaPredicted RBP17.56■□□□□ 0.4
TPM3-205ENST00000328159 GGA1Q9UJY5 639 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 HPS5Q9UPZ3 1129 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 KIF3AQ9Y496 699 aa17.56■□□□□ 0.4
TPM3-205ENST00000328159 DNM1Q05193 864 aaKnown RBP17.55■□□□□ 0.4
TPM3-205ENST00000328159 PPARAQ07869 468 aa17.55■□□□□ 0.4
TPM3-205ENST00000328159 TMC4Q7Z404 712 aa17.55■□□□□ 0.4
TPM3-205ENST00000328159 FERMT3Q86UX7 667 aa17.55■□□□□ 0.4
TPM3-205ENST00000328159 PODXL2Q9NZ53 605 aa17.55■□□□□ 0.4
TPM3-205ENST00000328159 JAG2Q9Y219 1238 aa17.55■□□□□ 0.4
TPM3-205ENST00000328159 BAZ2AQ9UIF9 1905 aaKnown RBP17.55■□□□□ 0.4
TPM3-205ENST00000328159 DHX16O60231 1041 aaKnown RBP17.54■□□□□ 0.4
TPM3-205ENST00000328159 IGSF3O75054 1194 aa17.54■□□□□ 0.4
TPM3-205ENST00000328159 POTEAQ6S8J7 498 aa17.54■□□□□ 0.4
TPM3-205ENST00000328159 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
TPM3-205ENST00000328159 ANAPC4Q9UJX5 808 aa17.54■□□□□ 0.4
TPM3-205ENST00000328159 LTBP1Q14766 1721 aa17.54■□□□□ 0.4
TPM3-205ENST00000328159 H3BQV1 296 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 KDM4AO75164 1064 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 GADD45BO75293 160 aaPredicted RBP17.53■□□□□ 0.4
TPM3-205ENST00000328159 IFFO2Q5TF58 517 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 IGDCC4Q8TDY8 1250 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 ZSWIM5Q9P217 1185 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 ISY1Q9ULR0 285 aaKnown RBP17.53■□□□□ 0.4
TPM3-205ENST00000328159 MINDY4BA8MYZ0 360 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 PPEF1O14829 653 aaPredicted RBP17.53■□□□□ 0.4
TPM3-205ENST00000328159 FIBPO43427 364 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 MMP10P09238 476 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 CSPP1Q1MSJ5 1256 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 TMEM67Q5HYA8 995 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 GIMAP6Q6P9H5 292 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 DZIP1Q86YF9 867 aaKnown RBP17.53■□□□□ 0.4
TPM3-205ENST00000328159 SP8Q8IXZ3 490 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
TPM3-205ENST00000328159 PARP3Q9Y6F1 533 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 DUOX1Q9NRD9 1551 aa17.53■□□□□ 0.4
TPM3-205ENST00000328159 RRP12Q5JTH9 1297 aaKnown RBP17.52■□□□□ 0.4
TPM3-205ENST00000328159 RAB11FIP4Q86YS3 637 aa17.52■□□□□ 0.4
TPM3-205ENST00000328159 TBC1D16Q8TBP0 767 aa17.52■□□□□ 0.4
TPM3-205ENST00000328159 CRNKL1Q9BZJ0 848 aaKnown RBP17.52■□□□□ 0.4
TPM3-205ENST00000328159 LY9Q9HBG7 655 aa17.52■□□□□ 0.4
TPM3-205ENST00000328159 CD209Q9NNX6 404 aa17.52■□□□□ 0.4
TPM3-205ENST00000328159 TOMM22Q9NS69 142 aa17.52■□□□□ 0.4
TPM3-205ENST00000328159 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.4
TPM3-205ENST00000328159 IFIT3O14879 490 aaKnown RBP17.51■□□□□ 0.39
TPM3-205ENST00000328159 LDHBP07195 334 aaKnown RBP17.51■□□□□ 0.39
TPM3-205ENST00000328159 SRGNP10124 158 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 NPR1P16066 1061 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 RESTQ13127 1097 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 ZSCAN23Q3MJ62 389 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 POLLQ9UGP5 575 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 COL11A2P13942 1736 aaPredicted RBP17.51■□□□□ 0.39
TPM3-205ENST00000328159 FDPSP14324 419 aaKnown RBP17.51■□□□□ 0.39
TPM3-205ENST00000328159 IL1R1P14778 569 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 PDE6BP35913 854 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 LIFRP42702 1097 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 KRT85P78386 507 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 APOA5Q6Q788 366 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 STK11IPQ8N1F8 1099 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 ATP6V0A2Q9Y487 856 aa17.51■□□□□ 0.39
TPM3-205ENST00000328159 LAMB1P07942 1786 aa17.5■□□□□ 0.39
TPM3-205ENST00000328159 CPLX1O14810 134 aa17.5■□□□□ 0.39
TPM3-205ENST00000328159 ZNF445P59923 1031 aa17.5■□□□□ 0.39
TPM3-205ENST00000328159 GSTO1P78417 241 aa17.5■□□□□ 0.39
TPM3-205ENST00000328159 MSL1Q68DK7 614 aa17.5■□□□□ 0.39
TPM3-205ENST00000328159 GAS2L3Q86XJ1 694 aa17.5■□□□□ 0.39
TPM3-205ENST00000328159 MTA3Q9BTC8 594 aa17.5■□□□□ 0.39
TPM3-205ENST00000328159 ZSCAN16Q9H4T2 348 aaPredicted RBP17.5■□□□□ 0.39
TPM3-205ENST00000328159 TMEM63CQ9P1W3 806 aa17.5■□□□□ 0.39
TPM3-205ENST00000328159 MYH15Q9Y2K3 1946 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms