RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 BMP2KLQ5H9B9 411 aa16.98■□□□□ 0.31
CMTM1-201ENST00000328020 APOBEC3HQ6NTF7 200 aaKnown RBP16.98■□□□□ 0.31
CMTM1-201ENST00000328020 ZBED3Q96IU2 234 aaPredicted RBP16.98■□□□□ 0.31
CMTM1-201ENST00000328020 PRMT6Q96LA8 375 aaPredicted RBP16.98■□□□□ 0.31
CMTM1-201ENST00000328020 USP40Q9NVE5 1235 aa16.98■□□□□ 0.31
CMTM1-201ENST00000328020 MAGEB6P1A0A0J9YX57 407 aa16.97■□□□□ 0.31
CMTM1-201ENST00000328020 EGFRP00533 1210 aa16.97■□□□□ 0.31
CMTM1-201ENST00000328020 HIRAP54198 1017 aaPredicted RBP16.97■□□□□ 0.31
CMTM1-201ENST00000328020 PPP4CP60510 307 aa16.97■□□□□ 0.31
CMTM1-201ENST00000328020 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
CMTM1-201ENST00000328020 SULF1Q8IWU6 871 aa16.97■□□□□ 0.31
CMTM1-201ENST00000328020 APPBP2Q92624 585 aa16.97■□□□□ 0.31
CMTM1-201ENST00000328020 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
CMTM1-201ENST00000328020 PGAP2Q9UHJ9 254 aa16.97■□□□□ 0.31
CMTM1-201ENST00000328020 ECM29Q5VYK3 1845 aa16.96■□□□□ 0.31
CMTM1-201ENST00000328020 SDSP20132 328 aa16.96■□□□□ 0.31
CMTM1-201ENST00000328020 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
CMTM1-201ENST00000328020 ANGEL2Q5VTE6 544 aaKnown RBP16.96■□□□□ 0.31
CMTM1-201ENST00000328020 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
CMTM1-201ENST00000328020 ZNF384Q8TF68 577 aa16.96■□□□□ 0.31
CMTM1-201ENST00000328020 AIDAQ96BJ3 306 aa16.96■□□□□ 0.31
CMTM1-201ENST00000328020 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
CMTM1-201ENST00000328020 VEZTQ9HBM0 779 aa16.96■□□□□ 0.31
CMTM1-201ENST00000328020 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.31
CMTM1-201ENST00000328020 GGA3Q9NZ52 723 aa16.96■□□□□ 0.31
CMTM1-201ENST00000328020 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
CMTM1-201ENST00000328020 TCRBV5S4A2TA0A5A2 114 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 KIF3CO14782 793 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 TOMM70O94826 608 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 GSPT1P15170 499 aaKnown RBP16.95■□□□□ 0.3
CMTM1-201ENST00000328020 MFAP1P55081 439 aaKnown RBP16.95■□□□□ 0.3
CMTM1-201ENST00000328020 CDC42EP5Q6NZY7 148 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 CASC1Q6TDU7 716 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 CDC37L1Q7L3B6 337 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 TEX11Q8IYF3 940 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 MIGA1Q8NAN2 632 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 SMC1BQ8NDV3 1235 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
CMTM1-201ENST00000328020 DDRGK1Q96HY6 314 aa16.95■□□□□ 0.3
CMTM1-201ENST00000328020 CRNKL1Q9BZJ0 848 aaKnown RBP16.95■□□□□ 0.3
CMTM1-201ENST00000328020 CLRN2A0PK11 232 aa16.94■□□□□ 0.3
CMTM1-201ENST00000328020 KRT26Q7Z3Y9 468 aa16.94■□□□□ 0.3
CMTM1-201ENST00000328020 RUFY2Q8WXA3 655 aa16.94■□□□□ 0.3
CMTM1-201ENST00000328020 HELLSQ9NRZ9 838 aa16.94■□□□□ 0.3
CMTM1-201ENST00000328020 PPP2R3BQ9Y5P8 575 aa16.94■□□□□ 0.3
CMTM1-201ENST00000328020 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
CMTM1-201ENST00000328020 GNAT2P19087 354 aa16.93■□□□□ 0.3
CMTM1-201ENST00000328020 ZMYM1Q5SVZ6 1142 aa16.93■□□□□ 0.3
CMTM1-201ENST00000328020 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
CMTM1-201ENST00000328020 FAM83AQ86UY5 434 aa16.93■□□□□ 0.3
CMTM1-201ENST00000328020 PCDHAC2Q9Y5I4 1007 aa16.93■□□□□ 0.3
CMTM1-201ENST00000328020 POLR2AP24928 1970 aaKnown RBP16.93■□□□□ 0.3
CMTM1-201ENST00000328020 MBD4O95243 580 aa16.92■□□□□ 0.3
CMTM1-201ENST00000328020 USP5P45974 858 aa16.92■□□□□ 0.3
CMTM1-201ENST00000328020 FSTL1Q12841 308 aa16.92■□□□□ 0.3
CMTM1-201ENST00000328020 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
CMTM1-201ENST00000328020 SKAP1Q86WV1 359 aa16.92■□□□□ 0.3
CMTM1-201ENST00000328020 SH3RF3Q8TEJ3 882 aaPredicted RBP16.92■□□□□ 0.3
CMTM1-201ENST00000328020 HOOK2Q96ED9 719 aa16.92■□□□□ 0.3
CMTM1-201ENST00000328020 IDI2Q9BXS1 227 aa16.92■□□□□ 0.3
CMTM1-201ENST00000328020 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
CMTM1-201ENST00000328020 TCP10L2B9ZVM9 353 aa16.91■□□□□ 0.3
CMTM1-201ENST00000328020 ENTPD3O75355 529 aa16.91■□□□□ 0.3
CMTM1-201ENST00000328020 RHBDL3P58872 404 aa16.91■□□□□ 0.3
CMTM1-201ENST00000328020 MAP1SQ66K74 1059 aaPredicted RBP16.91■□□□□ 0.3
CMTM1-201ENST00000328020 RIOK1Q9BRS2 568 aaKnown RBP16.91■□□□□ 0.3
CMTM1-201ENST00000328020 DEFB129Q9H1M3 183 aa16.91■□□□□ 0.3
CMTM1-201ENST00000328020 POTEIP0CG38 1075 aa16.9■□□□□ 0.3
CMTM1-201ENST00000328020 POTEJP0CG39 1038 aa16.9■□□□□ 0.3
CMTM1-201ENST00000328020 NF2P35240 595 aa16.9■□□□□ 0.3
CMTM1-201ENST00000328020 DYNLL1P63167 89 aaKnown RBP16.9■□□□□ 0.3
CMTM1-201ENST00000328020 SUPT20HL1Q3ZLR7 823 aa16.9■□□□□ 0.3
CMTM1-201ENST00000328020 CWC27Q6UX04 472 aaKnown RBP16.9■□□□□ 0.3
CMTM1-201ENST00000328020 AMOTL1Q8IY63 956 aa16.9■□□□□ 0.3
CMTM1-201ENST00000328020 FAM151AQ8WW52 585 aa16.9■□□□□ 0.3
CMTM1-201ENST00000328020 OSBP2Q969R2 916 aa16.9■□□□□ 0.3
CMTM1-201ENST00000328020 NACAP1Q9BZK3 213 aa16.9■□□□□ 0.3
CMTM1-201ENST00000328020 PUS7LQ9H0K6 701 aaKnown RBP16.9■□□□□ 0.3
CMTM1-201ENST00000328020 ARMT1Q9H993 441 aa16.9■□□□□ 0.3
CMTM1-201ENST00000328020 ASTN2O75129 1339 aaPredicted RBP16.9■□□□□ 0.3
CMTM1-201ENST00000328020 GPAA1O43292 621 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 CDC45O75419 566 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
CMTM1-201ENST00000328020 CACNB3P54284 484 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 NMIQ13287 307 aaPredicted RBP16.89■□□□□ 0.29
CMTM1-201ENST00000328020 PICALMQ13492 652 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 RASA3Q14644 834 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 LCORLQ8N3X6 602 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 TGFBRAP1Q8WUH2 860 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 STRBPQ96SI9 672 aaKnown RBP16.89■□□□□ 0.29
CMTM1-201ENST00000328020 ATP8A2Q9NTI2 1148 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 SLC4A4Q9Y6R1 1079 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 RAD50Q92878 1312 aa16.89■□□□□ 0.29
CMTM1-201ENST00000328020 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.29
CMTM1-201ENST00000328020 CHMLP26374 656 aa16.88■□□□□ 0.29
CMTM1-201ENST00000328020 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
CMTM1-201ENST00000328020 ZSCAN29Q8IWY8 852 aaPredicted RBP16.88■□□□□ 0.29
CMTM1-201ENST00000328020 GLIS2Q9BZE0 524 aaPredicted RBP16.88■□□□□ 0.29
CMTM1-201ENST00000328020 DHX36Q9H2U1 1008 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms