RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 KCNA6P17658 529 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 HSPA4P34932 840 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 PLCD1P51178 756 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 NBPF11Q86T75 865 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 LMBRD1Q9NUN5 540 aa12.31□□□□□ -0.44
SNRNP200-201ENST00000323853 KDM5DQ9BY66 1539 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 PHACTR2O75167 634 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 ACTN2P35609 894 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 CUTAO60888 179 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 TIMM10P62072 90 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 LEO1Q8WVC0 666 aaPredicted RBP12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 CCT6AP40227 531 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 PPP1R2P41236 205 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 APPBP2Q92624 585 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 NCOA5Q9HCD5 579 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 SAP30BPQ9UHR5 308 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 KCNH3Q9ULD8 1083 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 SSH2Q76I76 1423 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 TSNARE1Q96NA8 513 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 RTCBQ9Y3I0 505 aaKnown RBP12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 CDC37L1Q7L3B6 337 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 ERO1AQ96HE7 468 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.442e-9■□□□□ 8.4
SNRNP200-201ENST00000323853 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 PDE8AO60658 829 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 ATP2C2O75185 946 aa12.3□□□□□ -0.44
SNRNP200-201ENST00000323853 HDXQ7Z353 690 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 TBX22Q9Y458 520 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 CYP26C1Q6V0L0 522 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 PIK3AP1Q6ZUJ8 805 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 FAM89AQ96GI7 184 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 GPAA1O43292 621 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 WDHD1O75717 1129 aaPredicted RBP12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 FANCCQ00597 558 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 GSTA5Q7RTV2 222 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 IGSF22Q8N9C0 903 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 NOC4LQ9BVI4 516 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 RRAGDQ9NQL2 400 aaPredicted RBP12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 IMPACTQ9P2X3 320 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 ANGEL1Q9UNK9 670 aaKnown RBP12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 SELENOSQ9BQE4 189 aa12.29□□□□□ -0.44
SNRNP200-201ENST00000323853 C6orf163Q5TEZ5 329 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 PAIP2Q9BPZ3 127 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 KDRP35968 1356 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 CAPN2P17655 700 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 CTDSPL2Q05D32 466 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 CCDC122Q5T0U0 273 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 CCDC65Q8IXS2 484 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 LETM2Q2VYF4 491 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 CCDC77Q9BR77 488 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 JAG2Q9Y219 1238 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 FAM135BQ49AJ0 1406 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 IFT81Q8WYA0 676 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 KDM6BO15054 1643 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 RIMBP2O15034 1052 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 CCNT1O60563 726 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 CCDC50Q8IVM0 306 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 KBTBD3Q8NAB2 608 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 TNNC1P63316 161 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 PARP10Q53GL7 1025 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 CNNM4Q6P4Q7 775 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 PPP1R14CQ8TAE6 165 aa12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 NAPGQ99747 312 aaPredicted RBP12.28□□□□□ -0.44
SNRNP200-201ENST00000323853 GJC1P36383 396 aa12.27□□□□□ -0.44
SNRNP200-201ENST00000323853 EIF4A1P60842 406 aaKnown RBP12.27□□□□□ -0.44
SNRNP200-201ENST00000323853 MSL1Q68DK7 614 aa12.27□□□□□ -0.44
SNRNP200-201ENST00000323853 TTF2Q9UNY4 1162 aaKnown RBP12.27□□□□□ -0.44
SNRNP200-201ENST00000323853 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.44
SNRNP200-201ENST00000323853 PDE4DQ08499 809 aa12.27□□□□□ -0.44
SNRNP200-201ENST00000323853 TUBB2AQ13885 445 aa12.27□□□□□ -0.44
SNRNP200-201ENST00000323853 GCKRQ14397 625 aa12.27□□□□□ -0.44
SNRNP200-201ENST00000323853 TUBB2BQ9BVA1 445 aa12.27□□□□□ -0.44
SNRNP200-201ENST00000323853 EEF2P13639 858 aaKnown RBP12.27□□□□□ -0.45
SNRNP200-201ENST00000323853 EVCP57679 992 aa12.27□□□□□ -0.45
SNRNP200-201ENST00000323853 UBE2Q2Q8WVN8 375 aa12.27□□□□□ -0.45
SNRNP200-201ENST00000323853 TUBBP07437 444 aa12.27□□□□□ -0.45
SNRNP200-201ENST00000323853 DCAF17Q5H9S7 520 aaPredicted RBP12.27□□□□□ -0.45
SNRNP200-201ENST00000323853 ANKS4BQ8N8V4 417 aa12.27□□□□□ -0.45
SNRNP200-201ENST00000323853 ATRIPQ8WXE1 791 aa12.27□□□□□ -0.45
SNRNP200-201ENST00000323853 DSCC1Q9BVC3 393 aa12.27□□□□□ -0.45
SNRNP200-201ENST00000323853 PLS1Q14651 629 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 SHROOM2Q13796 1616 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 POLR2DO15514 142 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 EPB41P11171 864 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 CEP63Q96MT8 703 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 PAK1Q13153 545 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 TTC38Q5R3I4 469 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 HS2ST1Q7LGA3 356 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 IMPG2Q9BZV3 1241 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 VPS16Q9H269 839 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 MAGI2Q86UL8 1455 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 MROH5Q6ZUA9 1318 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 RIOK3O14730 519 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 ZNF202O95125 648 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 HIBADHP31937 336 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 RAPGEF1Q13905 1077 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 SREK1Q8WXA9 508 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 C8orf37Q96NL8 207 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms